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Mouse SNP Summary
Symbol
Name
ID 		Rr402749
regulatory region 402749
MGI:7698861

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs259361677
MGI SNP Detail		 Chr11:77103065 6330571C24Rik within coordinates of
Gm45027 within coordinates of
Rr402749 1958 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs224048540
MGI SNP Detail		 Chr11:77103086 6330571C24Rik within coordinates of
Gm45027 within coordinates of
Rr402749 1937 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248977130
MGI SNP Detail		 Chr11:77103135 6330571C24Rik within coordinates of
Gm45027 within coordinates of
Rr402749 1888 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214699963
MGI SNP Detail		 Chr11:77103148 6330571C24Rik within coordinates of
Gm45027 within coordinates of
Rr402749 1875 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229453644
MGI SNP Detail		 Chr11:77103175 6330571C24Rik within coordinates of
Gm45027 within coordinates of
Rr402749 1848 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs257905352
MGI SNP Detail		 Chr11:77103177 6330571C24Rik within coordinates of
Gm45027 within coordinates of
Rr402749 1846 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs215697220
MGI SNP Detail		 Chr11:77103265 6330571C24Rik within coordinates of
Gm45027 within coordinates of
Rr402749 1758 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs236387557
MGI SNP Detail		 Chr11:77103463 6330571C24Rik within coordinates of
Gm45027 within coordinates of
Rr402749 1560 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs254234865
MGI SNP Detail		 Chr11:77103499 6330571C24Rik within coordinates of
Gm45027 within coordinates of
Rr402749 1524 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212762743
MGI SNP Detail		 Chr11:77103586 6330571C24Rik within coordinates of
Gm45027 within coordinates of
Rr402749 1437 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs230828010
MGI SNP Detail		 Chr11:77103602 6330571C24Rik within coordinates of
Gm45027 within coordinates of
Rr402749 1421 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs255664326
MGI SNP Detail		 Chr11:77103707 6330571C24Rik within coordinates of
Gm45027 within coordinates of
Rr402749 1316 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs223184910
MGI SNP Detail		 Chr11:77103739 6330571C24Rik within coordinates of
Gm45027 within coordinates of
Rr402749 1284 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs243226100
MGI SNP Detail		 Chr11:77103822 6330571C24Rik within coordinates of
Gm45027 within coordinates of
Rr402749 1201 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs263412845
MGI SNP Detail		 Chr11:77103834 6330571C24Rik within coordinates of
Gm45027 within coordinates of
Rr402749 1189 bp upstream
 SNP C/G/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C G C C C C
rs221075799
MGI SNP Detail		 Chr11:77103917 6330571C24Rik within coordinates of
Gm45027 within coordinates of
Rr402749 1106 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241924219
MGI SNP Detail		 Chr11:77103988 6330571C24Rik within coordinates of
Gm45027 within coordinates of
Rr402749 1035 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs259303068
MGI SNP Detail		 Chr11:77104038 Gm45027 within coordinates of
Rr402749 985 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224702411
MGI SNP Detail		 Chr11:77104039 Gm45027 within coordinates of
Rr402749 984 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs585724788
MGI SNP Detail		 Chr11:77104207 Gm45027 within coordinates of
Rr402749 816 bp upstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs579909299
MGI SNP Detail		 Chr11:77104214 Gm45027 within coordinates of
Rr402749 809 bp upstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs583013497
MGI SNP Detail		 Chr11:77104216 Gm45027 within coordinates of
Rr402749 807 bp upstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs585631110
MGI SNP Detail		 Chr11:77104218 Gm45027 within coordinates of
Rr402749 805 bp upstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs580370903
MGI SNP Detail		 Chr11:77104220 Gm45027 within coordinates of
Rr402749 803 bp upstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs584020336
MGI SNP Detail		 Chr11:77104224 Gm45027 within coordinates of
Rr402749 799 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs243680379
MGI SNP Detail		 Chr11:77104230 Gm45027 within coordinates of
Rr402749 793 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs587194593
MGI SNP Detail		 Chr11:77104236 Gm45027 within coordinates of
Rr402749 787 bp upstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs581303518
MGI SNP Detail		 Chr11:77104240 Gm45027 within coordinates of
Rr402749 783 bp upstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs262659851
MGI SNP Detail		 Chr11:77104280 Gm45027 within coordinates of
Rr402749 743 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T C T T T T
rs229991010
MGI SNP Detail		 Chr11:77104293 Gm45027 within coordinates of
Rr402749 730 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs252786839
MGI SNP Detail		 Chr11:77104533 Gm45027 within coordinates of
Rr402749 490 bp upstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs214898014
MGI SNP Detail		 Chr11:77104615 Gm45027 within coordinates of
Rr402749 408 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs229173762
MGI SNP Detail		 Chr11:77105095 Gm45027 within coordinates of
Rr402749 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228215425
MGI SNP Detail		 Chr11:77105168 Gm45027 within coordinates of
Rr402749 within coordinates of
 SNP A/G G A
rs212697388
MGI SNP Detail		 Chr11:77105312 Gm45027 within coordinates of
Rr402749 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs234560805
MGI SNP Detail		 Chr11:77105313 Gm45027 within coordinates of
Rr402749 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262407283
MGI SNP Detail		 Chr11:77105339 Gm45027 within coordinates of
Rr402749 15 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs214947382
MGI SNP Detail		 Chr11:77105353 Gm45027 within coordinates of
Rr402749 29 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs238341577
MGI SNP Detail		 Chr11:77105396 Gm45027 within coordinates of
Rr402749 72 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs259505792
MGI SNP Detail		 Chr11:77105415 Gm45027 within coordinates of
Rr236495 within coordinates of
Rr402749 91 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs48323477
MGI SNP Detail		 Chr11:77105572 Gm45027 within coordinates of
Rr236495 within coordinates of
Rr402749 248 bp downstream
Rr402750 within coordinates of
 SNP G/T T T G
rs220841951
MGI SNP Detail		 Chr11:77105614 Gm45027 within coordinates of
Rr236495 within coordinates of
Rr247226 within coordinates of
Rr402749 290 bp downstream
Rr402750 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs241860706
MGI SNP Detail		 Chr11:77105659 Gm45027 within coordinates of
Rr236495 within coordinates of
Rr247226 within coordinates of
Rr402749 335 bp downstream
Rr402750 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs245161021
MGI SNP Detail		 Chr11:77105827 Gm45027 within coordinates of
Rr247226 within coordinates of
Rr402749 503 bp downstream
Rr402750 within coordinates of
 SNP C/T T C
rs219039861
MGI SNP Detail		 Chr11:77105949 Gm45027 within coordinates of
Rr247226 within coordinates of
Rr402749 625 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs241539399
MGI SNP Detail		 Chr11:77106099 Gm45027 within coordinates of
Rr247226 within coordinates of
Rr402749 775 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265369651
MGI SNP Detail		 Chr11:77106191 Gm45027 within coordinates of
Rr247226 within coordinates of
Rr402749 867 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs229567569
MGI SNP Detail		 Chr11:77106425 Gm45027 within coordinates of
Rr247226 within coordinates of
Rr402749 1101 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs248687906
MGI SNP Detail		 Chr11:77106431 Gm45027 within coordinates of
Rr247226 within coordinates of
Rr402749 1107 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs214321509
MGI SNP Detail		 Chr11:77106479 Gm45027 within coordinates of
Rr247226 within coordinates of
Rr402749 1155 bp downstream
 SNP C/G C G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs258759276
MGI SNP Detail		 Chr11:77106484 Gm45027 within coordinates of
Rr247226 within coordinates of
Rr402749 1160 bp downstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs228941772
MGI SNP Detail		 Chr11:77106498 Gm45027 within coordinates of
Rr247226 within coordinates of
Rr402749 1174 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G G G C G G G G G G G C G G G G
rs247943922
MGI SNP Detail		 Chr11:77106521 Cpgi3303 within coordinates of
Gm45027 within coordinates of
Rr247226 within coordinates of
Rr402749 1197 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs256748552
MGI SNP Detail		 Chr11:77106563 Cpgi3303 within coordinates of
Gm45027 within coordinates of
Rr247226 within coordinates of
Rr402749 1239 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs228202627
MGI SNP Detail		 Chr11:77106667 Cpgi3303 within coordinates of
Gm45027 within coordinates of
Rr247226 within coordinates of
Rr402749 1343 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T T T T T T
rs583600232
MGI SNP Detail		 Chr11:77106710 Cpgi3303 within coordinates of
Gm45027 within coordinates of
Rr247226 within coordinates of
Rr402749 1386 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251373899
MGI SNP Detail		 Chr11:77106796 Cpgi3303 within coordinates of
Gm45027 within coordinates of
Rr247226 within coordinates of
Rr402749 1472 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T C T T T T T T C T T T T T T T C T T T T
rs214063273
MGI SNP Detail		 Chr11:77106859 Cpgi3303 within coordinates of
Gm45027 within coordinates of
Rr247226 within coordinates of
Rr402749 1535 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A C A A A A A A C A A A A A A A A A A A A
rs236343578
MGI SNP Detail		 Chr11:77106878 Cpgi3303 within coordinates of
Gm45027 within coordinates of
Rr247226 within coordinates of
Rr402749 1554 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs246141155
MGI SNP Detail		 Chr11:77106911 Cpgi3303 within coordinates of
Gm45027 within coordinates of
Rr247226 within coordinates of
Rr402749 1587 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs215219391
MGI SNP Detail		 Chr11:77107147 Cpgi3303 within coordinates of
Gm45027 within coordinates of
Rr247226 within coordinates of
Rr402749 1823 bp downstream
Ssh2 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs235254516
MGI SNP Detail		 Chr11:77107154 Cpgi3303 within coordinates of
Gm45027 within coordinates of
Rr247226 within coordinates of
Rr402749 1830 bp downstream
Ssh2 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
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Showing SNP(s) 1 - 62 of 62
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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MGI 6.24 		The Jackson Laboratory