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Mouse SNP Summary
Symbol
Name
ID 		Rr403780
regulatory region 403780
MGI:7699892

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs265564034
MGI SNP Detail
Alliance Variant		 Chr13:53529375 Rr403780 1963 bp upstream
Sptlc1 Intron
Sptlc1 Noncoding-Transcript-Variant
 SNP A/G A G
rs49744940
MGI SNP Detail
Alliance Variant		 Chr13:53529380 Rr403780 1958 bp upstream
Sptlc1 Intron
Sptlc1 Noncoding-Transcript-Variant
 SNP G G G G G G
rs228535673
MGI SNP Detail
Alliance Variant		 Chr13:53529394 Rr403780 1944 bp upstream
Sptlc1 Intron
Sptlc1 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs29494147
MGI SNP Detail
Alliance Variant		 Chr13:53529437 Rr403780 1901 bp upstream
Sptlc1 Intron
Sptlc1 Noncoding-Transcript-Variant
 SNP C/T T C C T T C
rs254258323
MGI SNP Detail
Alliance Variant		 Chr13:53529458 Rr403780 1880 bp upstream
Sptlc1 Intron
Sptlc1 Noncoding-Transcript-Variant
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs579435547
MGI SNP Detail
Alliance Variant		 Chr13:53529475 Rr403780 1863 bp upstream
Sptlc1 Intron
Sptlc1 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs29681874
MGI SNP Detail
Alliance Variant		 Chr13:53529569 Rr403780 1769 bp upstream
Sptlc1 Intron
Sptlc1 Noncoding-Transcript-Variant
 SNP A/G G A G G
rs251052159
MGI SNP Detail
Alliance Variant		 Chr13:53529600 Rr403780 1738 bp upstream
Sptlc1 Intron
Sptlc1 Noncoding-Transcript-Variant
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs265371229
MGI SNP Detail
Alliance Variant		 Chr13:53529616 Rr403780 1722 bp upstream
Sptlc1 Intron
Sptlc1 Noncoding-Transcript-Variant
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs29855716
MGI SNP Detail
Alliance Variant		 Chr13:53529628 Rr403780 1710 bp upstream
Sptlc1 Intron
Sptlc1 Noncoding-Transcript-Variant
 SNP A/G G G A G G G
rs49068054
MGI SNP Detail
Alliance Variant		 Chr13:53529655 Rr403780 1683 bp upstream
Sptlc1 Intron
Sptlc1 Noncoding-Transcript-Variant
 SNP C/T C C T C C C C C C C C C T T C T C
rs29551449
MGI SNP Detail
Alliance Variant		 Chr13:53529662 Rr403780 1676 bp upstream
Sptlc1 Intron
Sptlc1 Noncoding-Transcript-Variant
 SNP C/G C G C C
rs236067360
MGI SNP Detail
Alliance Variant		 Chr13:53529716 Rr403780 1622 bp upstream
Sptlc1 Intron
Sptlc1 Noncoding-Transcript-Variant
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs29775581
MGI SNP Detail
Alliance Variant		 Chr13:53529735 Rr403780 1603 bp upstream
Sptlc1 Intron
Sptlc1 Noncoding-Transcript-Variant
 SNP C/G C C C C C C C G G C C C C G C C G C C
rs29588119
MGI SNP Detail
Alliance Variant		 Chr13:53529820 Rr403780 1518 bp upstream
Sptlc1 Intron
Sptlc1 Noncoding-Transcript-Variant
 SNP C/T T T T C T T
rs238085137
MGI SNP Detail
Alliance Variant		 Chr13:53529832 Rr403780 1506 bp upstream
Sptlc1 Intron
Sptlc1 Noncoding-Transcript-Variant
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs257830022
MGI SNP Detail
Alliance Variant		 Chr13:53529877 Rr403780 1461 bp upstream
Sptlc1 Intron
Sptlc1 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs224103898
MGI SNP Detail
Alliance Variant		 Chr13:53529891 Rr403780 1447 bp upstream
Sptlc1 Intron
Sptlc1 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29230079
MGI SNP Detail
Alliance Variant		 Chr13:53529949 Rr403780 1389 bp upstream
Sptlc1 Intron
Sptlc1 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G A G G G G G G G G A G G
rs252112240
MGI SNP Detail
Alliance Variant		 Chr13:53529950 Rr403780 1388 bp upstream
Sptlc1 Intron
Sptlc1 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs49105447
MGI SNP Detail
Alliance Variant		 Chr13:53529985 Rr403780 1353 bp upstream
Sptlc1 Intron
Sptlc1 Noncoding-Transcript-Variant
 SNP C/T C C T T C C T T C C C C T T T T T T
rs45965596
MGI SNP Detail
Alliance Variant		 Chr13:53530046 Rr403780 1292 bp upstream
Sptlc1 Intron
Sptlc1 Noncoding-Transcript-Variant
 SNP C/T C C C C C C T C C C C C C C C
rs253986752
MGI SNP Detail
Alliance Variant		 Chr13:53530187 Rr403780 1151 bp upstream
Sptlc1 Intron
Sptlc1 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs52523287
MGI SNP Detail
Alliance Variant		 Chr13:53530288 Rr403780 1050 bp upstream
Sptlc1 Intron
Sptlc1 Noncoding-Transcript-Variant
 SNP C/T C C C C C T C C C T C C
rs30003213
MGI SNP Detail
Alliance Variant		 Chr13:53530301 Rr403780 1037 bp upstream
Sptlc1 Intron
Sptlc1 Noncoding-Transcript-Variant
 SNP A/G G G G G G A A G G A A G G A G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs47854805
MGI SNP Detail
Alliance Variant		 Chr13:53530376 Rr403780 962 bp upstream
Sptlc1 Intron
Sptlc1 Noncoding-Transcript-Variant
 SNP G/T G G T G G G G G G G G G T T G T G
rs29569019
MGI SNP Detail
Alliance Variant		 Chr13:53530439 Rr403780 899 bp upstream
Sptlc1 Intron
Sptlc1 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C T C C C C C C C C T C C
rs48721794
MGI SNP Detail
Alliance Variant		 Chr13:53530457 Rr403780 881 bp upstream
Sptlc1 Intron
Sptlc1 Noncoding-Transcript-Variant
 SNP A/T A A A T
rs48632883
MGI SNP Detail
Alliance Variant		 Chr13:53530480 Rr403780 858 bp upstream
Sptlc1 Intron
Sptlc1 Noncoding-Transcript-Variant
 SNP A/C C C C C C C A C C C C C C C C
rs228999448
MGI SNP Detail
Alliance Variant		 Chr13:53530568 Rr403780 770 bp upstream
Sptlc1 Intron
Sptlc1 Noncoding-Transcript-Variant
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs30060229
MGI SNP Detail
Alliance Variant		 Chr13:53530580 Rr403780 758 bp upstream
Sptlc1 Intron
Sptlc1 Noncoding-Transcript-Variant
 SNP C/T C C C T C C C T T C C C C T T T T T C
rs29547975
MGI SNP Detail
Alliance Variant		 Chr13:53530628 Rr403780 710 bp upstream
Sptlc1 Intron
Sptlc1 Noncoding-Transcript-Variant
 SNP C/T T T C C T T C C C T T T C C C C T
rs223066964
MGI SNP Detail
Alliance Variant		 Chr13:53530639 Rr403780 699 bp upstream
Sptlc1 Intron
Sptlc1 Noncoding-Transcript-Variant
 SNP G/T G T
rs235875686
MGI SNP Detail
Alliance Variant		 Chr13:53530670 Rr403780 668 bp upstream
Sptlc1 Intron
Sptlc1 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs48683226
MGI SNP Detail
Alliance Variant		 Chr13:53530717 Rr403780 621 bp upstream
Sptlc1 Intron
Sptlc1 Noncoding-Transcript-Variant
 SNP A/G G G G A G G G A G G G G A A A A A G
rs46358345
MGI SNP Detail
Alliance Variant		 Chr13:53530754 Rr403780 584 bp upstream
Sptlc1 Intron
Sptlc1 Noncoding-Transcript-Variant
 SNP A/C C C C C C C C A C C C C A C C A C C
rs47496339
MGI SNP Detail
Alliance Variant		 Chr13:53530923 Rr403780 415 bp upstream
Sptlc1 Intron
Sptlc1 Noncoding-Transcript-Variant
 SNP A/T T A A A A A A A T T A T A
rs29246345
MGI SNP Detail
Alliance Variant		 Chr13:53531130 Cpgi5620 within coordinates of
Rr403780 208 bp upstream
Sptlc1 Intron
Sptlc1 mRNA-UTR
Sptlc1 Noncoding-Transcript-Variant
 SNP C/T T T C C T T C C C T T T T C C C C C T
rs47291164
MGI SNP Detail
Alliance Variant		 Chr13:53531145 Cpgi5620 within coordinates of
Rr403780 193 bp upstream
Sptlc1 Intron
Sptlc1 mRNA-UTR
Sptlc1 Noncoding-Transcript-Variant
 SNP C/T C C T C C C C C C C C C T T C T C
rs49934181
MGI SNP Detail
Alliance Variant		 Chr13:53531190 Cpgi5620 within coordinates of
Rr403780 148 bp upstream
Sptlc1 Intron
Sptlc1 mRNA-UTR
Sptlc1 Noncoding-Transcript-Variant
 SNP C/G C C C C C C G C C C C C C C C
rs248318239
MGI SNP Detail
Alliance Variant		 Chr13:53531227 Cpgi5620 within coordinates of
Rr403780 111 bp upstream
Sptlc1 Intron
Sptlc1 mRNA-UTR
Sptlc1 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs221237669
MGI SNP Detail
Alliance Variant		 Chr13:53531231 Cpgi5620 within coordinates of
Rr403780 107 bp upstream
Sptlc1 Intron
Sptlc1 mRNA-UTR
Sptlc1 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs47767801
MGI SNP Detail
Alliance Variant		 Chr13:53531265 Cpgi5620 within coordinates of
Rr403780 73 bp upstream
Sptlc1 Intron
Sptlc1 mRNA-UTR
Sptlc1 Noncoding-Transcript-Variant
 SNP C/T C C T C C C C C C C C C T T C T C
rs48383989
MGI SNP Detail
Alliance Variant		 Chr13:53531277 Cpgi5620 within coordinates of
Rr403780 61 bp upstream
Sptlc1 Intron
Sptlc1 mRNA-UTR
Sptlc1 Noncoding-Transcript-Variant
 SNP A/G A A G A A A A A A A A A G G A G A
rs29236440
MGI SNP Detail
Alliance Variant		 Chr13:53531303 Cpgi5620 within coordinates of
Rr403780 35 bp upstream
Sptlc1 Intron
Sptlc1 mRNA-UTR
Sptlc1 Noncoding-Transcript-Variant
 SNP A/G A A A A A A A G G A A A G A A G A
rs48121900
MGI SNP Detail
Alliance Variant		 Chr13:53531371 Cpgi5620 within coordinates of
Rr403780 within coordinates of
Sptlc1 Coding-Synonymous
Sptlc1 mRNA-UTR
Sptlc1 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C T C
rs29616460
MGI SNP Detail		 Chr13:53531444 Cpgi5620 within coordinates of
Rr403780 within coordinates of
Rr480032 within coordinates of
 SNP A/G G G G G G G G A A G G G G A G G A A G
rs30095841
MGI SNP Detail		 Chr13:53531529 Cpgi5620 within coordinates of
Rr403780 within coordinates of
Rr480032 within coordinates of
 SNP C/T T C T T C
rs257185492
MGI SNP Detail		 Chr13:53531530 Cpgi5620 within coordinates of
Rr403780 within coordinates of
Rr480032 within coordinates of
 SNP C/G G C
rs261804671
MGI SNP Detail		 Chr13:53531531 Cpgi5620 within coordinates of
Rr403780 within coordinates of
Rr480032 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs229819315
MGI SNP Detail		 Chr13:53531542 Cpgi5620 within coordinates of
Rr403780 within coordinates of
Rr480032 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251145375
MGI SNP Detail		 Chr13:53531549 Cpgi5620 within coordinates of
Rr403780 within coordinates of
Rr480032 within coordinates of
 SNP C/T C C C C C T C C C C C C T T T T T T T C C C T C C C C T C C C C C C C C C C C T C C C C C C C C C C C C
rs578471620
MGI SNP Detail		 Chr13:53531550 Cpgi5620 within coordinates of
Rr403780 within coordinates of
Rr480032 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216174492
MGI SNP Detail		 Chr13:53531552 Cpgi5620 within coordinates of
Rr403780 within coordinates of
Rr480032 within coordinates of
 SNP A/G G G G G G A G G G G G G A A A A A A A G G G A G G G G A G G G G G G G G G G G A G G G G G G G G G G G G
rs227574225
MGI SNP Detail		 Chr13:53531553 Cpgi5620 within coordinates of
Rr403780 within coordinates of
Rr480032 within coordinates of
 SNP C/T C C C C C T C C C C C C T T T T T T T C C C T C C C C T C C C C C C C C C C C T C C C C C C C C C C C C
rs47743835
MGI SNP Detail		 Chr13:53531591 Cpgi5620 within coordinates of
Rr403780 within coordinates of
Rr480032 within coordinates of
 SNP C/G G G C G G G G G G G G G C C G C G
rs217262989
MGI SNP Detail		 Chr13:53531609 Cpgi5620 within coordinates of
Rr403780 within coordinates of
Rr480032 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs46071782
MGI SNP Detail		 Chr13:53531613 Cpgi5620 within coordinates of
Rr403780 within coordinates of
Rr480032 within coordinates of
 SNP C/G G G C G G G C G G G G G G G G G
rs230093144
MGI SNP Detail		 Chr13:53531645 Rr403780 6 bp downstream
Rr480032 within coordinates of
 SNP C/G G C
rs46788935
MGI SNP Detail		 Chr13:53531679 Rr403780 40 bp downstream
Rr480032 within coordinates of
 SNP A/G G G A G G G A G G G G A A A A A G
rs46954548
MGI SNP Detail		 Chr13:53531710 Rr403780 71 bp downstream
Rr480032 within coordinates of
 SNP C C C C C C
rs257904943
MGI SNP Detail		 Chr13:53531732 Rr403780 93 bp downstream
Rr480032 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs221066916
MGI SNP Detail		 Chr13:53531749 Rr403780 110 bp downstream
Rr480032 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs51823883
MGI SNP Detail		 Chr13:53531751 Rr403780 112 bp downstream
Rr480032 within coordinates of
 SNP C C C C C
rs254823845
MGI SNP Detail		 Chr13:53531767 Rr403780 128 bp downstream
Rr480032 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs223713887
MGI SNP Detail		 Chr13:53531773 Rr403780 134 bp downstream
Rr480032 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs237473090
MGI SNP Detail		 Chr13:53531844 Rr403780 205 bp downstream
Rr480032 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs264807612
MGI SNP Detail		 Chr13:53531845 Rr403780 206 bp downstream
Rr480032 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T A T T T T T T T T T T T T
rs30830516
MGI SNP Detail		 Chr13:53531876 Rr403780 237 bp downstream
Rr480032 within coordinates of
 SNP C/T C C T C C
rs585896540
MGI SNP Detail		 Chr13:53531915 Rr403780 276 bp downstream
Rr480032 within coordinates of
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs578922493
MGI SNP Detail		 Chr13:53531918 Rr403780 279 bp downstream
Rr480032 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs582719071
MGI SNP Detail		 Chr13:53531919 Rr403780 280 bp downstream
Rr480032 within coordinates of
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs585947330
MGI SNP Detail		 Chr13:53531933 Rr403780 294 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs580301884
MGI SNP Detail		 Chr13:53531937 Rr403780 298 bp downstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs52632720
MGI SNP Detail		 Chr13:53531970 Rr403780 331 bp downstream
 SNP C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs583759630
MGI SNP Detail		 Chr13:53531990 Rr403780 351 bp downstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs585345317
MGI SNP Detail		 Chr13:53532001 Rr403780 362 bp downstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs223391237
MGI SNP Detail		 Chr13:53532020 Rr403780 381 bp downstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs213490242
MGI SNP Detail		 Chr13:53532026 Rr403780 387 bp downstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs236394501
MGI SNP Detail		 Chr13:53532030 Rr403780 391 bp downstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs262537944
MGI SNP Detail		 Chr13:53532051 Rr403780 412 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs215303258
MGI SNP Detail		 Chr13:53532060 Rr403780 421 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs30009084
MGI SNP Detail		 Chr13:53532094 Rr403780 455 bp downstream
 SNP A/G G A G A
rs29677873
MGI SNP Detail		 Chr13:53532102 Rr403780 463 bp downstream
 SNP A/T A A T A A T
rs223766039
MGI SNP Detail		 Chr13:53532117 Rr403780 478 bp downstream
 SNP A/T T T T T A T T T T T T T T T T T T T T T T T T T T T A T T T T T T T A T A A A T T T T A A T T A T A T T A
rs29724231
MGI SNP Detail		 Chr13:53532201 Rr403780 562 bp downstream
 SNP C/T T T T C T T T
rs49583245
MGI SNP Detail		 Chr13:53532242 Rr403780 603 bp downstream
 SNP A/T A A A A A A T A A A A A A A A
rs29247212
MGI SNP Detail		 Chr13:53532259 Rr403780 620 bp downstream
 SNP C/T T T T T T T T C C T T T T C T T C T T
rs45894043
MGI SNP Detail		 Chr13:53532300 Rr403780 661 bp downstream
 SNP A/G A G A
rs29685897
MGI SNP Detail		 Chr13:53532308 Rr403780 669 bp downstream
 SNP A/G G G A
rs221176701
MGI SNP Detail		 Chr13:53532462 Rr403780 823 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240467733
MGI SNP Detail		 Chr13:53532484 Rr403780 845 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs246330024
MGI SNP Detail		 Chr13:53532533 Rr403780 894 bp downstream
 SNP G/T T G
rs249118545
MGI SNP Detail		 Chr13:53532536 Rr403780 897 bp downstream
 SNP A/T A T
rs218118708
MGI SNP Detail		 Chr13:53532561 Rr403780 922 bp downstream
 SNP C C C
rs587143071
MGI SNP Detail		 Chr13:53532666 Rr403780 1027 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs259858493
MGI SNP Detail		 Chr13:53532737 Rr403780 1098 bp downstream
 SNP A/T T T T T A T T T T T T T T T T T T T T T T T T T T T A T T T T T T A T A A A T T T T A A T T T A T T
rs223462169
MGI SNP Detail		 Chr13:53532802 Rr403780 1163 bp downstream
 SNP A/T A A A A A A A A T T T T
rs581349234
MGI SNP Detail		 Chr13:53532848 Rr403780 1209 bp downstream
 SNP C/T C C C C C C C C C C T T C
rs583551902
MGI SNP Detail		 Chr13:53532852 Rr403780 1213 bp downstream
 SNP C/T C C C C C C C C C C T T C
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Showing SNP(s) 1 - 100 of 123
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory