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Mouse SNP Summary
Symbol
Name
ID 		Rr404420
regulatory region 404420
MGI:7700532

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs579542634
MGI SNP Detail		 Chr15:67015267 Gm63615 within coordinates of
Rr1092 within coordinates of
Rr404420 1979 bp upstream
St3gal1 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G G G C G G G G G G G G G G G G
rs262110425
MGI SNP Detail		 Chr15:67015280 Gm63615 within coordinates of
Rr1092 within coordinates of
Rr404420 1966 bp upstream
St3gal1 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G T G G G G G G T G G G G G G G T G G G G
rs222479722
MGI SNP Detail		 Chr15:67015297 Gm63615 within coordinates of
Rr1092 within coordinates of
Rr404420 1949 bp upstream
St3gal1 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G C C C C C C C C C C C C
rs248774526
MGI SNP Detail		 Chr15:67015326 Gm63615 within coordinates of
Rr1092 within coordinates of
Rr404420 1920 bp upstream
St3gal1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs50674953
MGI SNP Detail		 Chr15:67015372 Gm63615 within coordinates of
Rr1092 within coordinates of
Rr404420 1874 bp upstream
St3gal1 within coordinates of
 SNP C/G C C C C C C G C C C G C C G C
rs47322553
MGI SNP Detail		 Chr15:67015387 Gm63615 within coordinates of
Rr1092 within coordinates of
Rr404420 1859 bp upstream
St3gal1 within coordinates of
 SNP C/G G G G G G G C G G G G G C G
rs241932708
MGI SNP Detail		 Chr15:67015404 Gm63615 within coordinates of
Rr1092 within coordinates of
Rr404420 1842 bp upstream
St3gal1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256473322
MGI SNP Detail		 Chr15:67015458 Gm63615 within coordinates of
Rr1092 within coordinates of
Rr404420 1788 bp upstream
St3gal1 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs223904132
MGI SNP Detail		 Chr15:67015459 Gm63615 within coordinates of
Rr1092 within coordinates of
Rr404420 1787 bp upstream
St3gal1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs243906931
MGI SNP Detail		 Chr15:67015496 Gm63615 within coordinates of
Rr404420 1750 bp upstream
St3gal1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs49873451
MGI SNP Detail		 Chr15:67015527 Gm63615 within coordinates of
Rr404420 1719 bp upstream
St3gal1 within coordinates of
 SNP A/G G G G G G G G G G G A G G A G
rs232665111
MGI SNP Detail		 Chr15:67015606 Gm63615 within coordinates of
Rr404420 1640 bp upstream
St3gal1 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs257620523
MGI SNP Detail		 Chr15:67015646 Gm63615 within coordinates of
Rr404420 1600 bp upstream
St3gal1 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs217488171
MGI SNP Detail		 Chr15:67015672 Gm63615 within coordinates of
Rr404420 1574 bp upstream
St3gal1 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs228841400
MGI SNP Detail		 Chr15:67015804 Gm63615 within coordinates of
Rr404420 1442 bp upstream
St3gal1 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs47040579
MGI SNP Detail		 Chr15:67015807 Gm63615 within coordinates of
Rr404420 1439 bp upstream
St3gal1 within coordinates of
 SNP A/G G G G G G G G G G G A G G A G
rs212201240
MGI SNP Detail		 Chr15:67015842 Gm63615 within coordinates of
Rr404420 1404 bp upstream
St3gal1 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs239049319
MGI SNP Detail		 Chr15:67015902 Gm63615 within coordinates of
Rr404420 1344 bp upstream
St3gal1 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs47991654
MGI SNP Detail		 Chr15:67015903 Gm63615 within coordinates of
Rr404420 1343 bp upstream
St3gal1 within coordinates of
 SNP A/G A A A G A G G A A A A A A G G
rs217396891
MGI SNP Detail		 Chr15:67015918 Gm63615 within coordinates of
Rr404420 1328 bp upstream
St3gal1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238029654
MGI SNP Detail		 Chr15:67015934 Gm63615 within coordinates of
Rr404420 1312 bp upstream
St3gal1 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs46010625
MGI SNP Detail		 Chr15:67015957 Gm63615 within coordinates of
Rr404420 1289 bp upstream
St3gal1 within coordinates of
 SNP A/G G G G G G G G G G G A G G A G
rs223321284
MGI SNP Detail		 Chr15:67015992 Gm63615 within coordinates of
Rr404420 1254 bp upstream
St3gal1 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A C A A A A A A C A A A A A A A C A A A A
rs49151296
MGI SNP Detail		 Chr15:67016025 Gm63615 within coordinates of
Rr404420 1221 bp upstream
St3gal1 within coordinates of
 SNP A/G G G G G G G G G G G A G G A G
rs250407460
MGI SNP Detail		 Chr15:67016070 Gm63615 within coordinates of
Rr404420 1176 bp upstream
St3gal1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs50871694
MGI SNP Detail		 Chr15:67016072 Gm63615 within coordinates of
Rr404420 1174 bp upstream
St3gal1 within coordinates of
 SNP G/T G G G G G G G G G G T G G T G
rs246489209
MGI SNP Detail		 Chr15:67016104 Gm63615 within coordinates of
Rr404420 1142 bp upstream
St3gal1 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs262187013
MGI SNP Detail		 Chr15:67016120 Gm63615 within coordinates of
Rr404420 1126 bp upstream
St3gal1 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs51056458
MGI SNP Detail		 Chr15:67016182 Gm63615 within coordinates of
Rr404420 1064 bp upstream
St3gal1 within coordinates of
 SNP A/G G G G G G G G G G G A G G A G
rs244854489
MGI SNP Detail		 Chr15:67016212 Gm63615 within coordinates of
Rr404420 1034 bp upstream
St3gal1 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs260190930
MGI SNP Detail		 Chr15:67016215 Gm63615 within coordinates of
Rr404420 1031 bp upstream
St3gal1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228747257
MGI SNP Detail		 Chr15:67016279 Gm63615 within coordinates of
Rr404420 967 bp upstream
St3gal1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs243452189
MGI SNP Detail		 Chr15:67016288 Gm63615 within coordinates of
Rr404420 958 bp upstream
St3gal1 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs212444688
MGI SNP Detail		 Chr15:67016292 Gm63615 within coordinates of
Rr404420 954 bp upstream
St3gal1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231233689
MGI SNP Detail		 Chr15:67016296 Gm63615 within coordinates of
Rr404420 950 bp upstream
St3gal1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs255372501
MGI SNP Detail		 Chr15:67016310 Gm63615 within coordinates of
Rr404420 936 bp upstream
St3gal1 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C
rs216722791
MGI SNP Detail		 Chr15:67016364 Gm63615 within coordinates of
Rr404420 882 bp upstream
St3gal1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240199810
MGI SNP Detail		 Chr15:67016387 Gm63615 within coordinates of
Rr404420 859 bp upstream
St3gal1 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs248967147
MGI SNP Detail		 Chr15:67016450 Gm63615 within coordinates of
Rr404420 796 bp upstream
St3gal1 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs217335223
MGI SNP Detail		 Chr15:67016481 Gm63615 within coordinates of
Rr404420 765 bp upstream
St3gal1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235409736
MGI SNP Detail		 Chr15:67016500 Gm63615 within coordinates of
Rr404420 746 bp upstream
St3gal1 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs250444356
MGI SNP Detail		 Chr15:67016528 Gm63615 within coordinates of
Rr404420 718 bp upstream
St3gal1 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs49842021
MGI SNP Detail		 Chr15:67016533 Gm63615 within coordinates of
Rr404420 713 bp upstream
St3gal1 within coordinates of
 SNP A/T T T T T T T A T T T T T T
rs236943660
MGI SNP Detail		 Chr15:67016555 Gm63615 within coordinates of
Rr404420 691 bp upstream
St3gal1 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs261830779
MGI SNP Detail		 Chr15:67016638 Gm63615 within coordinates of
Rr404420 608 bp upstream
St3gal1 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs224619070
MGI SNP Detail		 Chr15:67016681 Gm63615 within coordinates of
Rr404420 565 bp upstream
St3gal1 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A A A A A C A A A A A A A C A A A A
rs247590246
MGI SNP Detail		 Chr15:67016715 Gm63615 within coordinates of
Rr404420 531 bp upstream
St3gal1 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A T T T T T T A T T T T T T T A T T T T
rs259617188
MGI SNP Detail		 Chr15:67016732 Gm63615 within coordinates of
Rr404420 514 bp upstream
St3gal1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs222217223
MGI SNP Detail		 Chr15:67017070 Gm63615 within coordinates of
Rr404420 176 bp upstream
St3gal1 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs236991061
MGI SNP Detail		 Chr15:67017097 Gm63615 within coordinates of
Rr404420 149 bp upstream
St3gal1 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs254126176
MGI SNP Detail		 Chr15:67017102 Gm63615 within coordinates of
Rr404420 144 bp upstream
St3gal1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs231621613
MGI SNP Detail		 Chr15:67017137 Gm63615 within coordinates of
Rr404420 109 bp upstream
St3gal1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs251035190
MGI SNP Detail		 Chr15:67017157 Gm63615 within coordinates of
Rr404420 89 bp upstream
St3gal1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265744631
MGI SNP Detail		 Chr15:67017203 Gm63615 within coordinates of
Rr404420 43 bp upstream
St3gal1 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A
rs231717748
MGI SNP Detail		 Chr15:67017219 Gm63615 within coordinates of
Rr404420 27 bp upstream
St3gal1 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs249000089
MGI SNP Detail		 Chr15:67017288 Gm63615 within coordinates of
Rr404420 within coordinates of
St3gal1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216821340
MGI SNP Detail		 Chr15:67017334 Gm63615 within coordinates of
Rr404420 within coordinates of
St3gal1 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs230814199
MGI SNP Detail		 Chr15:67017389 Gm63615 within coordinates of
Rr404420 within coordinates of
St3gal1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs244179444
MGI SNP Detail		 Chr15:67017390 Gm63615 within coordinates of
Rr404420 within coordinates of
St3gal1 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs46362199
MGI SNP Detail		 Chr15:67017394 Gm63615 within coordinates of
Rr404420 within coordinates of
St3gal1 within coordinates of
 SNP A/T A A A A A A A A A A A A T A
rs211885637
MGI SNP Detail		 Chr15:67017416 Gm63615 within coordinates of
Rr404420 within coordinates of
St3gal1 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs31618431
MGI SNP Detail		 Chr15:67017446 Gm63615 within coordinates of
Rr404420 within coordinates of
St3gal1 within coordinates of
 SNP C/G G G C G
rs238983539
MGI SNP Detail		 Chr15:67017521 Gm63615 within coordinates of
Rr404420 within coordinates of
St3gal1 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs257054150
MGI SNP Detail		 Chr15:67017644 Gm63615 within coordinates of
Rr404420 97 bp downstream
St3gal1 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs224822133
MGI SNP Detail		 Chr15:67017645 Gm63615 within coordinates of
Rr404420 98 bp downstream
St3gal1 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs49892365
MGI SNP Detail		 Chr15:67017672 Gm63615 within coordinates of
Rr404420 125 bp downstream
St3gal1 within coordinates of
 SNP A/G G G G G G G A G G G G G G G G
rs46238634
MGI SNP Detail		 Chr15:67017728 Gm63615 within coordinates of
Rr404420 181 bp downstream
St3gal1 within coordinates of
 SNP A/G G G G G G G G G G G A G G A G
rs221830769
MGI SNP Detail		 Chr15:67017730 Gm63615 within coordinates of
Rr404420 183 bp downstream
St3gal1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236411467
MGI SNP Detail		 Chr15:67017733 Gm63615 within coordinates of
Rr404420 186 bp downstream
St3gal1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254158625
MGI SNP Detail		 Chr15:67017773 Gm63615 within coordinates of
Rr404420 226 bp downstream
St3gal1 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs52007963
MGI SNP Detail		 Chr15:67017817 Gm63615 within coordinates of
Rr404420 270 bp downstream
St3gal1 within coordinates of
 SNP C/T C C C C C C T C C C C C C C C
rs246446176
MGI SNP Detail		 Chr15:67017874 Gm63615 within coordinates of
Rr404420 327 bp downstream
St3gal1 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs263809325
MGI SNP Detail		 Chr15:67017914 Gm63615 within coordinates of
Rr404420 367 bp downstream
St3gal1 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs49198987
MGI SNP Detail		 Chr15:67017924 Gm63615 within coordinates of
Rr404420 377 bp downstream
St3gal1 within coordinates of
 SNP C/T T T T T T T C T T T T T T T
rs47425199
MGI SNP Detail		 Chr15:67017979 Gm63615 within coordinates of
Rr404420 432 bp downstream
St3gal1 within coordinates of
 SNP A/C C C C C C C A C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs260672670
MGI SNP Detail		 Chr15:67017985 Gm63615 within coordinates of
Rr404420 438 bp downstream
St3gal1 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs47987159
MGI SNP Detail		 Chr15:67018021 Gm63615 within coordinates of
Rr404420 474 bp downstream
St3gal1 within coordinates of
 SNP A/C A A A A A A C A A A A A A A A
rs243649203
MGI SNP Detail		 Chr15:67018058 Gm63615 within coordinates of
Rr404420 511 bp downstream
St3gal1 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs583162953
MGI SNP Detail		 Chr15:67018079 Gm63615 within coordinates of
Rr404420 532 bp downstream
St3gal1 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs212123332
MGI SNP Detail		 Chr15:67018085 Gm63615 within coordinates of
Rr404420 538 bp downstream
St3gal1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs586537878
MGI SNP Detail		 Chr15:67018093 Gm63615 within coordinates of
Rr404420 546 bp downstream
St3gal1 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs581131294
MGI SNP Detail		 Chr15:67018098 Gm63615 within coordinates of
Rr404420 551 bp downstream
St3gal1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230763423
MGI SNP Detail		 Chr15:67018112 Gm63615 within coordinates of
Rr404420 565 bp downstream
St3gal1 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs255263301
MGI SNP Detail		 Chr15:67018196 Gm63615 within coordinates of
Rr404420 649 bp downstream
St3gal1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs50876362
MGI SNP Detail		 Chr15:67018211 Gm63615 within coordinates of
Rr404420 664 bp downstream
St3gal1 within coordinates of
 SNP C/G G G G G G G C G G G G G G
rs232806032
MGI SNP Detail		 Chr15:67018284 Gm63615 within coordinates of
Rr404420 737 bp downstream
St3gal1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs252951885
MGI SNP Detail		 Chr15:67018292 Gm63615 within coordinates of
Rr404420 745 bp downstream
St3gal1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs216330744
MGI SNP Detail		 Chr15:67018357 Gm63615 within coordinates of
Rr404420 810 bp downstream
St3gal1 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs230550058
MGI SNP Detail		 Chr15:67018506 Gm63615 within coordinates of
Rr404420 959 bp downstream
St3gal1 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs48762906
MGI SNP Detail		 Chr15:67018572 Gm63615 within coordinates of
Rr404420 1025 bp downstream
St3gal1 within coordinates of
 SNP A/T A A A A A A T A A A A A A A A
rs223493303
MGI SNP Detail		 Chr15:67018596 Gm63615 within coordinates of
Rr404420 1049 bp downstream
St3gal1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs583361714
MGI SNP Detail		 Chr15:67018618 Gm63615 within coordinates of
Rr404420 1071 bp downstream
St3gal1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs587226225
MGI SNP Detail		 Chr15:67018638 Gm63615 within coordinates of
Rr404420 1091 bp downstream
St3gal1 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs581629102
MGI SNP Detail		 Chr15:67018641 Gm63615 within coordinates of
Rr404420 1094 bp downstream
St3gal1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs579387187
MGI SNP Detail		 Chr15:67018644 Gm63615 within coordinates of
Rr404420 1097 bp downstream
St3gal1 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs580602425
MGI SNP Detail		 Chr15:67018645 Gm63615 within coordinates of
Rr404420 1098 bp downstream
St3gal1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs243447223
MGI SNP Detail		 Chr15:67018829 Rr404420 1282 bp downstream
St3gal1 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs263496488
MGI SNP Detail		 Chr15:67018847 Rr404420 1300 bp downstream
St3gal1 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs221403103
MGI SNP Detail		 Chr15:67018868 Rr404420 1321 bp downstream
St3gal1 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs48410521
MGI SNP Detail		 Chr15:67018885 Rr404420 1338 bp downstream
St3gal1 within coordinates of
 SNP G/T T T T T T T T T T T T T G T
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Showing SNP(s) 1 - 100 of 114
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory