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Mouse SNP Summary
Symbol
Name
ID 		Rr404696
regulatory region 404696
MGI:7700808

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Showing SNP(s) 1 - 68 of 68

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs243702003
MGI SNP Detail		 Chr16:15800522 Rr404696 1985 bp upstream
Spidr within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs51291102
MGI SNP Detail		 Chr16:15800551 Rr404696 1956 bp upstream
Spidr within coordinates of
 SNP G/T G G G G G G G T G T G
rs221448618
MGI SNP Detail		 Chr16:15800583 Rr404696 1924 bp upstream
Spidr within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs243911393
MGI SNP Detail		 Chr16:15800627 Rr404696 1880 bp upstream
Spidr within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A G A A A A G A A A A A A G A A A A A A A G A A A G
rs264367455
MGI SNP Detail		 Chr16:15800672 Rr404696 1835 bp upstream
Spidr within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228453478
MGI SNP Detail		 Chr16:15800679 Rr404696 1828 bp upstream
Spidr within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs241430270
MGI SNP Detail		 Chr16:15800711 Rr404696 1796 bp upstream
Spidr within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs259269829
MGI SNP Detail		 Chr16:15800717 Rr404696 1790 bp upstream
Spidr within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs4164995
MGI SNP Detail		 Chr16:15800795 Rr404696 1712 bp upstream
Spidr within coordinates of
 SNP A/C C A A
rs578438867
MGI SNP Detail		 Chr16:15800797 Rr404696 1710 bp upstream
Spidr within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C
rs250772743
MGI SNP Detail		 Chr16:15800806 Rr404696 1701 bp upstream
Spidr within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs213749313
MGI SNP Detail		 Chr16:15800808 Rr404696 1699 bp upstream
Spidr within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T A T T T T T T T A T T T
rs50325305
MGI SNP Detail		 Chr16:15800829 Rr404696 1678 bp upstream
Spidr within coordinates of
 SNP C/T C C C C C C C C C T C C C
rs228141673
MGI SNP Detail		 Chr16:15800861 Rr404696 1646 bp upstream
Spidr within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260511809
MGI SNP Detail		 Chr16:15800895 Rr404696 1612 bp upstream
Spidr within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs216926416
MGI SNP Detail		 Chr16:15800927 Rr404696 1580 bp upstream
Spidr within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs233787799
MGI SNP Detail		 Chr16:15800936 Rr404696 1571 bp upstream
Spidr within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251771316
MGI SNP Detail		 Chr16:15800996 Rr404696 1511 bp upstream
Spidr within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs214955283
MGI SNP Detail		 Chr16:15801019 Rr404696 1488 bp upstream
Spidr within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs238734623
MGI SNP Detail		 Chr16:15801058 Rr404696 1449 bp upstream
Spidr within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs256762489
MGI SNP Detail		 Chr16:15801108 Rr404696 1399 bp upstream
Spidr within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs220617814
MGI SNP Detail		 Chr16:15801110 Rr404696 1397 bp upstream
Spidr within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs241167092
MGI SNP Detail		 Chr16:15801145 Rr404696 1362 bp upstream
Spidr within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs255211913
MGI SNP Detail		 Chr16:15801248 Rr325846 within coordinates of
Rr404696 1259 bp upstream
Spidr within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs222563600
MGI SNP Detail		 Chr16:15801279 Rr325846 within coordinates of
Rr404696 1228 bp upstream
Spidr within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs241137919
MGI SNP Detail		 Chr16:15801305 Rr325846 within coordinates of
Rr404696 1202 bp upstream
Spidr within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T T C T T T T T T C T T T T T T T C T T T C
rs259331308
MGI SNP Detail		 Chr16:15801338 Rr325846 within coordinates of
Rr404696 1169 bp upstream
Spidr within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs231069335
MGI SNP Detail		 Chr16:15801359 Rr325846 within coordinates of
Rr404696 1148 bp upstream
Spidr within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs246097150
MGI SNP Detail		 Chr16:15801399 Rr325846 within coordinates of
Rr404696 1108 bp upstream
Spidr within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs261981717
MGI SNP Detail		 Chr16:15801491 Rr325846 within coordinates of
Rr404696 1016 bp upstream
Spidr within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs49196782
MGI SNP Detail		 Chr16:15801544 Rr325846 within coordinates of
Rr404696 963 bp upstream
Spidr within coordinates of
 SNP C/T T T T T T T T T T T C T C T
rs255088713
MGI SNP Detail		 Chr16:15801679 Rr325846 within coordinates of
Rr404696 828 bp upstream
Spidr within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs259399758
MGI SNP Detail		 Chr16:15801860 Rr325846 within coordinates of
Rr404696 647 bp upstream
Spidr within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227842997
MGI SNP Detail		 Chr16:15801945 Rr325846 within coordinates of
Rr404696 562 bp upstream
Spidr within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs245503264
MGI SNP Detail		 Chr16:15801972 Rr325846 within coordinates of
Rr404696 535 bp upstream
Spidr within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T
rs215013500
MGI SNP Detail		 Chr16:15802009 Rr325846 within coordinates of
Rr404696 498 bp upstream
Spidr within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs580636452
MGI SNP Detail		 Chr16:15802643 Rr325846 within coordinates of
Rr404696 within coordinates of
Spidr within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs585317510
MGI SNP Detail		 Chr16:15802705 Rr325846 within coordinates of
Rr404696 within coordinates of
Spidr within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236771760
MGI SNP Detail		 Chr16:15802801 Rr325846 within coordinates of
Rr404696 within coordinates of
Spidr within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs254913147
MGI SNP Detail		 Chr16:15802911 Rr325846 within coordinates of
Rr404696 103 bp downstream
Spidr within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs51434402
MGI SNP Detail		 Chr16:15803145 Rr325846 within coordinates of
Rr404696 337 bp downstream
Spidr within coordinates of
 SNP A/T A A A A A A A A A T A T A
rs47756291
MGI SNP Detail		 Chr16:15803452 Rr325846 within coordinates of
Rr404696 644 bp downstream
Spidr within coordinates of
 SNP A/T T T T T T T T T T T A T T A T
rs255276662
MGI SNP Detail		 Chr16:15803485 Rr325846 within coordinates of
Rr404696 677 bp downstream
Spidr within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs222631452
MGI SNP Detail		 Chr16:15803600 Rr325846 within coordinates of
Rr404696 792 bp downstream
Spidr within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234696253
MGI SNP Detail		 Chr16:15803624 Rr325846 within coordinates of
Rr404696 816 bp downstream
Spidr within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs252683290
MGI SNP Detail		 Chr16:15803720 Rr325846 within coordinates of
Rr404696 912 bp downstream
Spidr within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs222935441
MGI SNP Detail		 Chr16:15803810 Rr325846 within coordinates of
Rr404696 1002 bp downstream
Spidr within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs51675312
MGI SNP Detail		 Chr16:15803841 Rr325846 within coordinates of
Rr404696 1033 bp downstream
Spidr within coordinates of
 SNP C/T C C C C C C C C C T C C C
rs243358069
MGI SNP Detail		 Chr16:15803991 Rr325846 within coordinates of
Rr404696 1183 bp downstream
Spidr within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs264897574
MGI SNP Detail		 Chr16:15804085 Rr325846 within coordinates of
Rr404696 1277 bp downstream
Spidr within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs4164996
MGI SNP Detail		 Chr16:15804246 Rr325846 within coordinates of
Rr404696 1438 bp downstream
Spidr within coordinates of
 SNP C/T C C T C C
rs220533638
MGI SNP Detail		 Chr16:15804278 Rr325846 within coordinates of
Rr404696 1470 bp downstream
Spidr within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241607794
MGI SNP Detail		 Chr16:15804282 Rr325846 within coordinates of
Rr404696 1474 bp downstream
Spidr within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs51518524
MGI SNP Detail		 Chr16:15804330 Rr325846 within coordinates of
Rr404696 1522 bp downstream
Spidr within coordinates of
 SNP C/G G G G G G G G G G G G G C G
rs227893492
MGI SNP Detail		 Chr16:15804432 Rr325846 within coordinates of
Rr404696 1624 bp downstream
Spidr within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs245565486
MGI SNP Detail		 Chr16:15804439 Rr325846 within coordinates of
Rr404696 1631 bp downstream
Spidr within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs256638431
MGI SNP Detail		 Chr16:15804495 Rr325846 within coordinates of
Rr404696 1687 bp downstream
Spidr within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A G A A A A A A A A A A A A
rs230501562
MGI SNP Detail		 Chr16:15804500 Rr325846 within coordinates of
Rr404696 1692 bp downstream
Spidr within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs250508072
MGI SNP Detail		 Chr16:15804510 Rr325846 within coordinates of
Rr404696 1702 bp downstream
Spidr within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs212957958
MGI SNP Detail		 Chr16:15804518 Rr325846 within coordinates of
Rr404696 1710 bp downstream
Spidr within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
rs234357560
MGI SNP Detail		 Chr16:15804524 Rr325846 within coordinates of
Rr404696 1716 bp downstream
Spidr within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs248464737
MGI SNP Detail		 Chr16:15804549 Rr325846 within coordinates of
Rr404696 1741 bp downstream
Spidr within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs216707163
MGI SNP Detail		 Chr16:15804577 Rr325846 within coordinates of
Rr404696 1769 bp downstream
Spidr within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs234750715
MGI SNP Detail		 Chr16:15804610 Rr325846 within coordinates of
Rr404696 1802 bp downstream
Spidr within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A G A A A A G A A A A A A G A A A A A A A G A A A A
rs252754726
MGI SNP Detail		 Chr16:15804653 Rr325846 within coordinates of
Rr404696 1845 bp downstream
Spidr within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs49465997
MGI SNP Detail		 Chr16:15804722 Rr325846 within coordinates of
Rr404696 1914 bp downstream
Spidr within coordinates of
 SNP C/G C C C C C C C C C G C C C C
rs47069211
MGI SNP Detail		 Chr16:15804767 Rr325846 within coordinates of
Rr404696 1959 bp downstream
Spidr within coordinates of
 SNP A/G G G G G G G G G G G G A G
rs237865316
MGI SNP Detail		 Chr16:15804808 Rr325846 within coordinates of
Rr404696 2000 bp downstream
Spidr within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
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Showing SNP(s) 1 - 68 of 68
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory