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Mouse SNP Summary
Symbol
Name
ID
Rr825
regulatory region 825
MGI:7720593

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Showing SNP(s) 1 - 58 of 58

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs232965499
MGI SNP Detail
Chr2:38711535 Nr6a1 within coordinates of
Rr825 1968 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs243571448
MGI SNP Detail
Chr2:38711541 Nr6a1 within coordinates of
Rr825 1962 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
rs213055605
MGI SNP Detail
Chr2:38711559 Nr6a1 within coordinates of
Rr825 1944 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs235649840
MGI SNP Detail
Chr2:38711615 Nr6a1 within coordinates of
Rr825 1888 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs264314464
MGI SNP Detail
Chr2:38711647 Nr6a1 within coordinates of
Rr825 1856 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs219069892
MGI SNP Detail
Chr2:38711677 Nr6a1 within coordinates of
Rr825 1826 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs239791623
MGI SNP Detail
Chr2:38711680 Nr6a1 within coordinates of
Rr825 1823 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs27144719
MGI SNP Detail
Chr2:38711692 Nr6a1 within coordinates of
Rr825 1811 bp proximal
SNP A/G A A A G
rs219329745
MGI SNP Detail
Chr2:38711708 Nr6a1 within coordinates of
Rr825 1795 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs238078318
MGI SNP Detail
Chr2:38711951 Nr6a1 within coordinates of
Rr825 1552 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs247829454
MGI SNP Detail
Chr2:38711962 Nr6a1 within coordinates of
Rr825 1541 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G G G G G G G G T G G G G G G G G G G G G
rs218469644
MGI SNP Detail
Chr2:38712135 Nr6a1 within coordinates of
Rr825 1368 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs240654231
MGI SNP Detail
Chr2:38712252 Nr6a1 within coordinates of
Rr825 1251 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs266072355
MGI SNP Detail
Chr2:38712259 Nr6a1 within coordinates of
Rr825 1244 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs231937325
MGI SNP Detail
Chr2:38712293 Nr6a1 within coordinates of
Rr825 1210 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A A A A A A A A T A A A A A A A A A A A
rs249438251
MGI SNP Detail
Chr2:38712330 Nr6a1 within coordinates of
Rr825 1173 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs262576890
MGI SNP Detail
Chr2:38712403 Nr6a1 within coordinates of
Rr825 1100 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs226897301
MGI SNP Detail
Chr2:38712509 Nr6a1 within coordinates of
Rr825 994 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs243605320
MGI SNP Detail
Chr2:38712567 Nr6a1 within coordinates of
Rr825 936 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs212990077
MGI SNP Detail
Chr2:38712594 Nr6a1 within coordinates of
Rr825 909 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs228587049
MGI SNP Detail
Chr2:38712651 Nr6a1 within coordinates of
Rr825 852 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs254899315
MGI SNP Detail
Chr2:38712659 Nr6a1 within coordinates of
Rr825 844 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs216359274
MGI SNP Detail
Chr2:38712684 Nr6a1 within coordinates of
Rr825 819 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs237767111
MGI SNP Detail
Chr2:38712812 Nr6a1 within coordinates of
Rr825 691 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27144718
MGI SNP Detail
Chr2:38712929 Nr6a1 within coordinates of
Rr825 574 bp proximal
SNP A/T A T A T A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs263259233
MGI SNP Detail
Chr2:38713072 Nr6a1 within coordinates of
Rr825 431 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs213619123
MGI SNP Detail
Chr2:38713220 Nr6a1 within coordinates of
Rr825 283 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs232071155
MGI SNP Detail
Chr2:38713638 Nr6a1 within coordinates of
Nr6a1os within coordinates of
Rr825 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs248139313
MGI SNP Detail
Chr2:38713901 Nr6a1 within coordinates of
Nr6a1os within coordinates of
Rr825 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
rs218419356
MGI SNP Detail
Chr2:38714258 Nr6a1 within coordinates of
Nr6a1os within coordinates of
Rr825 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs249731661
MGI SNP Detail
Chr2:38714260 Nr6a1 within coordinates of
Nr6a1os within coordinates of
Rr825 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs260726734
MGI SNP Detail
Chr2:38714402 Nr6a1 within coordinates of
Nr6a1os within coordinates of
Rr367190 within coordinates of
Rr825 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs223875435
MGI SNP Detail
Chr2:38714591 Nr6a1 within coordinates of
Nr6a1os within coordinates of
Rr825 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T T T T T T T T A T T T T T T T A T T T T
rs27144717
MGI SNP Detail
Chr2:38714690 Nr6a1 within coordinates of
Nr6a1os within coordinates of
Rr825 within coordinates of
SNP A/G A A A A A A A A A G A A A A
rs246738919
MGI SNP Detail
Chr2:38714740 Nr6a1 within coordinates of
Nr6a1os within coordinates of
Rr825 24 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs27144716
MGI SNP Detail
Chr2:38714747 Nr6a1 within coordinates of
Nr6a1os within coordinates of
Rr825 31 bp distal
SNP A/G G G G G G G G G G G G G A G
rs3148213
MGI SNP Detail
Chr2:38714826 Nr6a1 within coordinates of
Nr6a1os within coordinates of
Rr825 110 bp distal
SNP A/G A A G A A A
rs237686467
MGI SNP Detail
Chr2:38715048 Nr6a1 within coordinates of
Nr6a1os within coordinates of
Rr825 332 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs3148214
MGI SNP Detail
Chr2:38715092 Nr6a1 within coordinates of
Nr6a1os within coordinates of
Rr825 376 bp distal
SNP A/G G G G A G G A A G G G G A G G A G A
rs228605518
MGI SNP Detail
Chr2:38715139 Nr6a1 within coordinates of
Nr6a1os within coordinates of
Rr825 423 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C C C C C C C C A C C C C C C C C C C C C
rs260248269
MGI SNP Detail
Chr2:38715143 Nr6a1 within coordinates of
Nr6a1os within coordinates of
Rr825 427 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G G G G G G G G A G G G G G G G A G G G G
rs27144715
MGI SNP Detail
Chr2:38715186 Nr6a1 within coordinates of
Nr6a1os within coordinates of
Rr825 470 bp distal
SNP C/T C C C C C C C C C C C C T C
rs27144714
MGI SNP Detail
Chr2:38715243 Nr6a1 within coordinates of
Nr6a1os within coordinates of
Rr825 527 bp distal
SNP A/G G G G G G G G G G G G G A G
rs27144713
MGI SNP Detail
Chr2:38715337 Nr6a1 within coordinates of
Nr6a1os within coordinates of
Rr825 621 bp distal
SNP C/G C C C C C C C C C C C C G C
rs27144712
MGI SNP Detail
Chr2:38715660 Nr6a1 within coordinates of
Nr6a1os within coordinates of
Rr825 944 bp distal
SNP A/G A A A A A A G A A A A A G A
rs232016532
MGI SNP Detail
Chr2:38715720 Nr6a1 within coordinates of
Nr6a1os within coordinates of
Rr825 1004 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs242320250
MGI SNP Detail
Chr2:38715748 Nr6a1 within coordinates of
Nr6a1os within coordinates of
Rr825 1032 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C
rs212833320
MGI SNP Detail
Chr2:38715860 Nr6a1 within coordinates of
Nr6a1os within coordinates of
Rr825 1144 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs239186528
MGI SNP Detail
Chr2:38715878 Nr6a1 within coordinates of
Nr6a1os within coordinates of
Rr825 1162 bp distal
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs264009178
MGI SNP Detail
Chr2:38715880 Nr6a1 within coordinates of
Nr6a1os within coordinates of
Rr825 1164 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs223995925
MGI SNP Detail
Chr2:38715972 Nr6a1 within coordinates of
Nr6a1os within coordinates of
Rr825 1256 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240777301
MGI SNP Detail
Chr2:38716045 Nr6a1 within coordinates of
Nr6a1os within coordinates of
Rr825 1329 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A A A A A A A A A A A A T A A A A
rs251009664
MGI SNP Detail
Chr2:38716052 Nr6a1 within coordinates of
Nr6a1os within coordinates of
Rr825 1336 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A G A A A A A A A A A
rs220572229
MGI SNP Detail
Chr2:38716144 Nr6a1 within coordinates of
Nr6a1os within coordinates of
Rr825 1428 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237504770
MGI SNP Detail
Chr2:38716548 Nr6a1 within coordinates of
Nr6a1os within coordinates of
Rr825 1832 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A A A A A A A A C A A A A A A A C A A A A
rs257150157
MGI SNP Detail
Chr2:38716663 Nr6a1 within coordinates of
Nr6a1os within coordinates of
Rr825 1947 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G G G G G G G G C G G G G G G G G G G G G
rs226607971
MGI SNP Detail
Chr2:38716665 Nr6a1 within coordinates of
Nr6a1os within coordinates of
Rr825 1949 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C T C C C C
rs248414796
MGI SNP Detail
Chr2:38716678 Nr6a1 within coordinates of
Nr6a1os within coordinates of
Rr825 1962 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 58 of 58

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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory