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Mouse SNP Summary
Symbol
Name
ID 		Rr410806
regulatory region 410806
MGI:7872938

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs580445064
MGI SNP Detail		 Chr1:52150914 Gm28177 within coordinates of
Gm31812 within coordinates of
Rr410806 1986 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A C A A
rs215966162
MGI SNP Detail		 Chr1:52150926 Gm28177 within coordinates of
Gm31812 within coordinates of
Rr410806 1974 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs228558504
MGI SNP Detail		 Chr1:52150956 Gm28177 within coordinates of
Gm31812 within coordinates of
Rr410806 1944 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs247569857
MGI SNP Detail		 Chr1:52150957 Gm28177 within coordinates of
Gm31812 within coordinates of
Rr410806 1943 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212268888
MGI SNP Detail		 Chr1:52150989 Gm28177 within coordinates of
Gm31812 within coordinates of
Rr410806 1911 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs230910912
MGI SNP Detail		 Chr1:52151010 Gm28177 within coordinates of
Gm31812 within coordinates of
Rr410806 1890 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs261941328
MGI SNP Detail		 Chr1:52151043 Gm28177 within coordinates of
Gm31812 within coordinates of
Rr410806 1857 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs214653202
MGI SNP Detail		 Chr1:52151078 Gm28177 within coordinates of
Gm31812 within coordinates of
Rr410806 1822 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A A
rs239917060
MGI SNP Detail		 Chr1:52151120 Gm28177 within coordinates of
Gm31812 within coordinates of
Rr410806 1780 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs259454947
MGI SNP Detail		 Chr1:52151165 Gm28177 within coordinates of
Gm31812 within coordinates of
Rr410806 1735 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs222282243
MGI SNP Detail		 Chr1:52151192 Gm28177 within coordinates of
Gm31812 within coordinates of
Rr410806 1708 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G A G G
rs242471786
MGI SNP Detail		 Chr1:52151233 Gm28177 within coordinates of
Gm31812 within coordinates of
Rr366897 within coordinates of
Rr410806 1667 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A C A A
rs249324342
MGI SNP Detail		 Chr1:52151242 Gm28177 within coordinates of
Gm31812 within coordinates of
Rr366897 within coordinates of
Rr410806 1658 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G A G G
rs218659710
MGI SNP Detail		 Chr1:52151246 Gm28177 within coordinates of
Gm31812 within coordinates of
Rr366897 within coordinates of
Rr410806 1654 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T T
rs242893202
MGI SNP Detail		 Chr1:52151314 Gm28177 within coordinates of
Gm31812 within coordinates of
Rr366897 within coordinates of
Rr410806 1586 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221847271
MGI SNP Detail		 Chr1:52151321 Gm28177 within coordinates of
Gm31812 within coordinates of
Rr366897 within coordinates of
Rr410806 1579 bp proximal
 SNP A/G A G
rs231182734
MGI SNP Detail		 Chr1:52151327 Gm28177 within coordinates of
Gm31812 within coordinates of
Rr366897 within coordinates of
Rr410806 1573 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G A G G
rs248357670
MGI SNP Detail		 Chr1:52151362 Gm28177 within coordinates of
Gm31812 within coordinates of
Rr366897 within coordinates of
Rr410806 1538 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs258502296
MGI SNP Detail		 Chr1:52151376 Gm28177 within coordinates of
Gm31812 within coordinates of
Rr366897 within coordinates of
Rr410806 1524 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs228466540
MGI SNP Detail		 Chr1:52151400 Gm28177 within coordinates of
Gm31812 within coordinates of
Rr366897 within coordinates of
Rr410806 1500 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs247506092
MGI SNP Detail		 Chr1:52151411 Gm28177 within coordinates of
Gm31812 within coordinates of
Rr366897 within coordinates of
Rr410806 1489 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254004925
MGI SNP Detail		 Chr1:52151428 Gm28177 within coordinates of
Gm31812 within coordinates of
Rr366897 within coordinates of
Rr410806 1472 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T C T T
rs229420783
MGI SNP Detail		 Chr1:52151569 Gm28177 within coordinates of
Gm31812 within coordinates of
Rr366897 within coordinates of
Rr410806 1331 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A
rs250910058
MGI SNP Detail		 Chr1:52151570 Gm28177 within coordinates of
Gm31812 within coordinates of
Rr366897 within coordinates of
Rr410806 1330 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs214950473
MGI SNP Detail		 Chr1:52151583 Gm28177 within coordinates of
Gm31812 within coordinates of
Rr366897 within coordinates of
Rr410806 1317 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs237773462
MGI SNP Detail		 Chr1:52151584 Gm28177 within coordinates of
Gm31812 within coordinates of
Rr366897 within coordinates of
Rr410806 1316 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C
rs247190206
MGI SNP Detail		 Chr1:52151604 Gm28177 within coordinates of
Gm31812 within coordinates of
Rr366897 within coordinates of
Rr410806 1296 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C T C C
rs216661520
MGI SNP Detail		 Chr1:52151678 Gm28177 within coordinates of
Gm31812 within coordinates of
Rr366897 within coordinates of
Rr410806 1222 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs236407983
MGI SNP Detail		 Chr1:52151725 Gm28177 within coordinates of
Gm31812 within coordinates of
Rr366897 within coordinates of
Rr410806 1175 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G T G G
rs249265200
MGI SNP Detail		 Chr1:52151843 Gm28177 within coordinates of
Gm31812 within coordinates of
Rr366897 within coordinates of
Rr410806 1057 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs218603585
MGI SNP Detail		 Chr1:52151851 Gm28177 within coordinates of
Gm31812 within coordinates of
Rr366897 within coordinates of
Rr410806 1049 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs237739308
MGI SNP Detail		 Chr1:52151875 Gm28177 within coordinates of
Gm31812 within coordinates of
Rr366897 within coordinates of
Rr410806 1025 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A
rs238556691
MGI SNP Detail		 Chr1:52151906 Gm28177 within coordinates of
Gm31812 within coordinates of
Rr366897 within coordinates of
Rr410806 994 bp proximal
 SNP C/G G C
rs223397021
MGI SNP Detail		 Chr1:52151920 Gm28177 within coordinates of
Gm31812 within coordinates of
Rr366897 within coordinates of
Rr410806 980 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T A T T
rs245655430
MGI SNP Detail		 Chr1:52152112 Gm28177 within coordinates of
Gm31812 within coordinates of
Rr366897 within coordinates of
Rr410805 within coordinates of
Rr410806 788 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G A G G
rs258437373
MGI SNP Detail		 Chr1:52152126 Gm28177 within coordinates of
Gm31812 within coordinates of
Rr366897 within coordinates of
Rr410805 within coordinates of
Rr410806 774 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs222278128
MGI SNP Detail		 Chr1:52152131 Gm28177 within coordinates of
Gm31812 within coordinates of
Rr366897 within coordinates of
Rr410805 within coordinates of
Rr410806 769 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs262910784
MGI SNP Detail		 Chr1:52152198 Gm28177 within coordinates of
Gm31812 within coordinates of
Rr366897 within coordinates of
Rr410805 within coordinates of
Rr410806 702 bp proximal
 SNP A/T T A
rs255436418
MGI SNP Detail		 Chr1:52152259 Gm28177 within coordinates of
Gm31812 within coordinates of
Rr366897 within coordinates of
Rr410805 within coordinates of
Rr410806 641 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs6329184
MGI SNP Detail		 Chr1:52152301 Gm28177 within coordinates of
Gm31812 within coordinates of
Rr366897 within coordinates of
Rr410805 within coordinates of
Rr410806 599 bp proximal
 SNP C/T T C T C
rs232392474
MGI SNP Detail		 Chr1:52152335 Gm28177 within coordinates of
Gm31812 within coordinates of
Rr366897 within coordinates of
Rr410805 within coordinates of
Rr410806 565 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs247141124
MGI SNP Detail		 Chr1:52152365 Gm28177 within coordinates of
Gm31812 within coordinates of
Rr366897 within coordinates of
Rr410805 within coordinates of
Rr410806 535 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs216599474
MGI SNP Detail		 Chr1:52152400 Gm28177 within coordinates of
Gm31812 within coordinates of
Rr366897 within coordinates of
Rr410805 within coordinates of
Rr410806 500 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236342724
MGI SNP Detail		 Chr1:52152409 Gm28177 within coordinates of
Gm31812 within coordinates of
Rr366897 within coordinates of
Rr410805 within coordinates of
Rr410806 491 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs243517076
MGI SNP Detail		 Chr1:52152441 Gm28177 within coordinates of
Gm31812 within coordinates of
Rr366897 within coordinates of
Rr410805 within coordinates of
Rr410806 459 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs6342629
MGI SNP Detail		 Chr1:52152489 Gm28177 within coordinates of
Gm31812 within coordinates of
Rr366897 within coordinates of
Rr410805 within coordinates of
Rr410806 411 bp proximal
 SNP C/T C T
rs235880081
MGI SNP Detail		 Chr1:52152800 Cpgi240 within coordinates of
Gm28177 within coordinates of
Gm31812 within coordinates of
Rr366897 within coordinates of
Rr410805 within coordinates of
Rr410806 100 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G A G G
rs262300744
MGI SNP Detail		 Chr1:52152803 Cpgi240 within coordinates of
Gm28177 within coordinates of
Gm31812 within coordinates of
Rr366897 within coordinates of
Rr410805 within coordinates of
Rr410806 97 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs223977732
MGI SNP Detail		 Chr1:52152842 Cpgi240 within coordinates of
Gm28177 within coordinates of
Gm31812 within coordinates of
Rr366897 within coordinates of
Rr410805 within coordinates of
Rr410806 58 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C T C C
rs233419166
MGI SNP Detail		 Chr1:52152848 Cpgi240 within coordinates of
Gm28177 within coordinates of
Gm31812 within coordinates of
Rr366897 within coordinates of
Rr410805 within coordinates of
Rr410806 52 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C T C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs252169653
MGI SNP Detail		 Chr1:52152852 Cpgi240 within coordinates of
Gm28177 within coordinates of
Gm31812 within coordinates of
Rr366897 within coordinates of
Rr410805 within coordinates of
Rr410806 48 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs222213792
MGI SNP Detail		 Chr1:52152855 Cpgi240 within coordinates of
Gm28177 within coordinates of
Gm31812 within coordinates of
Rr366897 within coordinates of
Rr410805 within coordinates of
Rr410806 45 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs241872874
MGI SNP Detail		 Chr1:52152871 Cpgi240 within coordinates of
Gm28177 within coordinates of
Gm31812 within coordinates of
Rr366897 within coordinates of
Rr410805 within coordinates of
Rr410806 29 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs254259284
MGI SNP Detail		 Chr1:52152887 Cpgi240 within coordinates of
Gm28177 within coordinates of
Gm31812 within coordinates of
Rr366897 within coordinates of
Rr410805 within coordinates of
Rr410806 13 bp proximal
 SNP C/T T T T T T T T T C T T T T T T T T T T C T T C T T T T C C T C T C T T T T T T C T T T T T T C T C T T
rs221117897
MGI SNP Detail		 Chr1:52152890 Cpgi240 within coordinates of
Gm28177 within coordinates of
Gm31812 within coordinates of
Rr366897 within coordinates of
Rr410805 within coordinates of
Rr410806 10 bp proximal
 SNP C/T T T T T T T T T C T T T T T T T T T T C T T C T T T T C C T C T C T T T T T T C T T T T T T T T T T T
rs243227740
MGI SNP Detail		 Chr1:52152897 Cpgi240 within coordinates of
Gm28177 within coordinates of
Gm31812 within coordinates of
Rr366897 within coordinates of
Rr410805 within coordinates of
Rr410806 3 bp proximal
 SNP C/T T T T T T T T T C T T T T T T T T T T C T T C T T T T C C T C T C T T T T T T C T T T T T T T T T T T
rs265320469
MGI SNP Detail		 Chr1:52153078 Cpgi240 within coordinates of
Gm28177 within coordinates of
Rr366897 within coordinates of
Rr410806 within coordinates of
 SNP C/T C C C C C C C C T C C C C C C C C C C C C C T C C C C T T C C T C T C C C C C C T C C C C C C C T C C C C
rs231795419
MGI SNP Detail		 Chr1:52153109 Cpgi240 within coordinates of
Gm28177 within coordinates of
Rr366897 within coordinates of
Rr410806 within coordinates of
 SNP C/G C C C C C C C C G C C C C C C C C C C C C C G C C C C G G C C G C G C C C C C C G C C C C C C C G C G C
rs241445264
MGI SNP Detail		 Chr1:52153124 Cpgi240 within coordinates of
Gm28177 within coordinates of
Rr366897 within coordinates of
Rr410806 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T
rs260497027
MGI SNP Detail		 Chr1:52153133 Cpgi240 within coordinates of
Gm28177 within coordinates of
Rr366897 within coordinates of
Rr410806 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs229136240
MGI SNP Detail		 Chr1:52153142 Cpgi240 within coordinates of
Gm28177 within coordinates of
Rr366897 within coordinates of
Rr410806 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs243461766
MGI SNP Detail		 Chr1:52153152 Cpgi240 within coordinates of
Gm28177 within coordinates of
Rr366897 within coordinates of
Rr410806 within coordinates of
 SNP A/G G G G G G G G G A G G G G G G G G G G G G G A G G G G A A G G A G A G G G G G G A G G G G G G G G G A G G
rs245619419
MGI SNP Detail		 Chr1:52153156 Cpgi240 within coordinates of
Gm28177 within coordinates of
Rr366897 within coordinates of
Rr410806 within coordinates of
 SNP C/G G C
rs230223103
MGI SNP Detail		 Chr1:52153164 Cpgi240 within coordinates of
Gm28177 within coordinates of
Rr366897 within coordinates of
Rr410806 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs251178242
MGI SNP Detail		 Chr1:52153172 Cpgi240 within coordinates of
Gm28177 within coordinates of
Rr366897 within coordinates of
Rr410806 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs215800749
MGI SNP Detail		 Chr1:52153207 Gm28177 within coordinates of
Rr366897 within coordinates of
Rr410806 within coordinates of
 SNP A/G A A A A A A A A G A A A A A A A A A A A A A G A A A A G G A A G A G A A A A A A G A A A A A A A A A A A A
rs233358000
MGI SNP Detail		 Chr1:52153211 Gm28177 within coordinates of
Rr366897 within coordinates of
Rr410806 within coordinates of
 SNP A/G G G G G G G G G A G G G G G G G G G G G G G A G G G G A A G G A G A G G G G G G A G G G G G G G A G A G G
rs252468161
MGI SNP Detail		 Chr1:52153228 Gm28177 within coordinates of
Rr366897 within coordinates of
Rr410806 within coordinates of
 SNP C/G G G G G G G G G C G G G G G G G G G G G G G C G G G G C C G G C G C G G G G G G C G G G G G G G G G C G G
rs216894471
MGI SNP Detail		 Chr1:52153260 Gm28177 within coordinates of
Rr366897 within coordinates of
Rr410806 within coordinates of
 SNP A/G G G G G G G G G A G G G G G G G G G G A G G A G G G G A A G G A G A G G G G G G A G G G G G G G G G G G G
rs582963133
MGI SNP Detail		 Chr1:52153280 Gm28177 within coordinates of
Rr366897 within coordinates of
Rr410806 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G C G G
rs235432522
MGI SNP Detail		 Chr1:52153300 Gm28177 within coordinates of
Rr366897 within coordinates of
Rr410806 within coordinates of
 SNP A/C A A A A A A A A C A A A A A A A A A A C A A C A A A A C C A A C A C A A A A A A C A A A A A A A A A A A A
rs261147606
MGI SNP Detail		 Chr1:52153307 Gm28177 within coordinates of
Rr366897 within coordinates of
Rr410806 within coordinates of
 SNP A/G G G G G G G G G A G G G G G G G G G G A G G A G G G G A A G G A G A G G G G G G A G G G G G G G G G G G G
rs222115201
MGI SNP Detail		 Chr1:52153340 Gm28177 within coordinates of
Rr366897 within coordinates of
Rr410806 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs38521926
MGI SNP Detail		 Chr1:52153413 Gm28177 within coordinates of
Rr366897 within coordinates of
Rr410806 within coordinates of
 SNP G/T G T T T T
rs257925083
MGI SNP Detail		 Chr1:52153463 Gm28177 within coordinates of
Rr366897 within coordinates of
Rr410806 within coordinates of
 SNP C/T T T T T T T T T C T T T T T T T T T T C T T C T T T T C C T T C T C T T T T T T C T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs224309186
MGI SNP Detail		 Chr1:52153480 Gm28177 within coordinates of
Rr366897 within coordinates of
Rr410806 within coordinates of
 SNP C/T T T T T T T T T C T T T T T T T T T T C T T C T T T T C C T T C T C T T T T T T C T T T T T T T C T T T T
rs241399475
MGI SNP Detail		 Chr1:52153530 Gm28177 within coordinates of
Rr366897 within coordinates of
Rr410806 13 bp distal
 SNP A/G G G G G G G G G A G G G G G G G G G G A G G A G G G G A A G G A G A G G G G G G A G G G G G G G G G G G G
rs260778502
MGI SNP Detail		 Chr1:52153580 Gm28177 within coordinates of
Rr366897 within coordinates of
Rr410806 63 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs229081926
MGI SNP Detail		 Chr1:52153618 Gm28177 within coordinates of
Rr366897 within coordinates of
Rr410806 101 bp distal
 SNP A/G G G G G G G G G A G G G G G G G G G G A G G A G G G G A A G G A G A G G G G G G A G G G G G G G A G G G G
rs585505851
MGI SNP Detail		 Chr1:52153643 Gm28177 within coordinates of
Rr366897 within coordinates of
Rr410806 126 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs237059077
MGI SNP Detail		 Chr1:52153645 Gm28177 within coordinates of
Rr366897 within coordinates of
Rr410806 128 bp distal
 SNP A/G G G G G G G G G A G G G G G G G G G G G G G A G G G G A A G G A G A G G G G G G A G G G G G G G G G G G G
rs264841064
MGI SNP Detail		 Chr1:52153678 Gm28177 within coordinates of
Rr366897 within coordinates of
Rr410806 161 bp distal
 SNP G/T G G G G G G G G T G G G G G G G G G G T G G T G G G G T T G G T G T G G G G G G T G G G G G G G G G G G G
rs229872158
MGI SNP Detail		 Chr1:52153680 Gm28177 within coordinates of
Rr366897 within coordinates of
Rr410806 163 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs256295653
MGI SNP Detail		 Chr1:52153700 Gm28177 within coordinates of
Rr366897 within coordinates of
Rr410806 183 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs215254908
MGI SNP Detail		 Chr1:52153831 Gm28177 within coordinates of
Rr410806 314 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256435024
MGI SNP Detail		 Chr1:52153862 Gm28177 within coordinates of
Rr410806 345 bp distal
 SNP C/T T C
rs246455588
MGI SNP Detail		 Chr1:52153920 Gm28177 within coordinates of
Rr410806 403 bp distal
 SNP A/G A A A A A A A A G A A A A A A A A A A G A A G A A A A G G A A G A G A A A A A A G A A A A A A A G A A A A
rs217170232
MGI SNP Detail		 Chr1:52154011 Gm28177 within coordinates of
Rr410806 494 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs229803837
MGI SNP Detail		 Chr1:52154030 Gm28177 within coordinates of
Rr410806 513 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs255739715
MGI SNP Detail		 Chr1:52154039 Gm28177 within coordinates of
Rr410806 522 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs213632194
MGI SNP Detail		 Chr1:52154040 Gm28177 within coordinates of
Rr410806 523 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs236526793
MGI SNP Detail		 Chr1:52154063 Gm28177 within coordinates of
Rr410806 546 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C T C C
rs36482745
MGI SNP Detail		 Chr1:52154064 Gm28177 within coordinates of
Rr410806 547 bp distal
 SNP A/G G A A A
rs221045984
MGI SNP Detail		 Chr1:52154078 Gm28177 within coordinates of
Rr410806 561 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C T C C
rs241343131
MGI SNP Detail		 Chr1:52154095 Gm28177 within coordinates of
Rr410806 578 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs254538792
MGI SNP Detail		 Chr1:52154113 Gm28177 within coordinates of
Rr410806 596 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A G A A
rs223617656
MGI SNP Detail		 Chr1:52154134 Gm28177 within coordinates of
Rr410806 617 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C T C C
rs244274083
MGI SNP Detail		 Chr1:52154162 Gm28177 within coordinates of
Rr410806 645 bp distal
 SNP A/G G G G G G G G G A G G G G G G G G G G A G G A G G G G A A G G A G A G G G G G G A G G G G G G G G G G G G
rs217959000
MGI SNP Detail		 Chr1:52154179 Gm28177 within coordinates of
Rr410806 662 bp distal
 SNP A/G G A
rs221973136
MGI SNP Detail		 Chr1:52154306 Gm28177 within coordinates of
Rr410806 789 bp distal
 SNP A/G A A A A A A A A G A A A A A A A A A A A A A G A A A A G G A A G A G A A A A A A G A A A A A A A A A A A A
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Showing SNP(s) 1 - 100 of 133
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory