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Mouse SNP Summary
Symbol
Name
ID
Rr417940
regulatory region 417940
MGI:7880072

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Showing SNP(s) 1 - 46 of 46

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129S1/SvImJ
129/Sv
129X1/Sv
129X1/SvJ
A
A/J
AKR
BALB/cBy
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C3H/He
C3H/HeJ
C57BL/6
C57BL/6J
CAST/EiJ
DBA/2
DBA/2J
FVB/NJ
KK/HlJ
LG/J
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
SM/J
SPRET/EiJ
WSB/EiJ
rs30830370
MGI SNP Detail
Chr1:130560325 Rr417940 1599 bp proximal
SNP G/T G G G G T G G G T G G T
rs246786112
MGI SNP Detail
Chr1:130560544 Rr417940 1380 bp proximal
SNP T T T
rs262851058
MGI SNP Detail
Chr1:130560562 Rr417940 1362 bp proximal
SNP T T T
rs228514146
MGI SNP Detail
Chr1:130560670 Rr417940 1254 bp proximal
SNP A A A
rs242406796
MGI SNP Detail
Chr1:130560862 Rr417940 1062 bp proximal
SNP C C C
rs30830369
MGI SNP Detail
Chr1:130561184 Rr417940 740 bp proximal
SNP C/T T T T T T T T T C T T C
rs265936537
MGI SNP Detail
Chr1:130561234 Rr417940 690 bp proximal
SNP C/T C T
rs229296593
MGI SNP Detail
Chr1:130561551 Rr417939 within coordinates of
Rr417940 373 bp proximal
SNP A/C C A
rs30830368
MGI SNP Detail
Chr1:130561588 Rr417939 within coordinates of
Rr417940 336 bp proximal
SNP C/T T T T T C T T T T T C
rs30830367
MGI SNP Detail
Chr1:130561720 Rr417939 within coordinates of
Rr417940 204 bp proximal
SNP A/T A A A A T A A A T T A A T T
rs30830366
MGI SNP Detail
Chr1:130561780 Rr417939 within coordinates of
Rr417940 144 bp proximal
SNP C/T T T T T C T T T T T C
rs30830365
MGI SNP Detail
Chr1:130561905 Rr417939 within coordinates of
Rr417940 19 bp proximal
SNP A/T A A A A T A A A T A A T
rs30830364
MGI SNP Detail
Chr1:130562028 Rr417939 within coordinates of
Rr417940 83 bp distal
SNP A/G A A A A G A A A G A A G
rs30829563
MGI SNP Detail
Chr1:130562063 Rr417939 within coordinates of
Rr417940 118 bp distal
SNP A/G G G G G G A G G G A G G A
rs30829562
MGI SNP Detail
Chr1:130562126 Rr417939 within coordinates of
Rr417940 181 bp distal
SNP A/G G G G G G G G G A G G A
rs30829561
MGI SNP Detail
Chr1:130562261 Rr417940 316 bp distal
SNP C/G C C C C G C C C C C C C
rs30829560
MGI SNP Detail
Chr1:130562309 Rr417940 364 bp distal
SNP A/G G G G G A G G G A A G G A A
rs30829559
MGI SNP Detail
Chr1:130562374 Rr417940 429 bp distal
SNP A/G A A A A G A A A A A A A
rs30829558
MGI SNP Detail
Chr1:130562423 Rr417940 478 bp distal
SNP G/T T T T T G T T T G T T G
rs30829557
MGI SNP Detail
Chr1:130562438 Rr417940 493 bp distal
SNP A/G A A A A A A A A G A A G
rs30829556
MGI SNP Detail
Chr1:130562504 Rr417940 559 bp distal
SNP C/T C C C C C C C C C T C C T C
rs30829555
MGI SNP Detail
Alliance Variant
Chr1:130562805 C4bp mRNA-UTR
Rr417940 860 bp distal
SNP A/G A A A A G A A A A A A A
rs30829554
MGI SNP Detail
Alliance Variant
Chr1:130562844 C4bp mRNA-UTR
Rr417940 899 bp distal
SNP C/G C C C C G C C C G C C G
rs226051192
MGI SNP Detail
Alliance Variant
Chr1:130562906 C4bp mRNA-UTR
Rr417940 961 bp distal
SNP T T T
rs30828243
MGI SNP Detail
Alliance Variant
Chr1:130562973 C4bp mRNA-UTR
Rr417940 1028 bp distal
SNP A/C A A A A A A A C A A C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129S1/SvImJ
129/Sv
129X1/Sv
129X1/SvJ
A
A/J
AKR
BALB/cBy
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C3H/He
C3H/HeJ
C57BL/6
C57BL/6J
CAST/EiJ
DBA/2
DBA/2J
FVB/NJ
KK/HlJ
LG/J
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
SM/J
SPRET/EiJ
WSB/EiJ
rs30828242
MGI SNP Detail
Alliance Variant
Chr1:130563060 C4bp mRNA-UTR
Rr417940 1115 bp distal
SNP C/T T T T T T T C
rs30828241
MGI SNP Detail
Alliance Variant
Chr1:130563318 C4bp mRNA-UTR
Rr417940 1373 bp distal
SNP C/T T T T T T T T T C T T C
rs48688391
MGI SNP Detail
Alliance Variant
Chr1:130563379 C4bp mRNA-UTR
Rr417940 1434 bp distal
SNP A/C C C A
rs45904038
MGI SNP Detail
Alliance Variant
Chr1:130563380 C4bp mRNA-UTR
Rr417940 1435 bp distal
SNP A/G A A A G
rs48039142
MGI SNP Detail
Alliance Variant
Chr1:130563388 C4bp mRNA-UTR
Rr417940 1443 bp distal
SNP A/T A A A T
rs4222598
MGI SNP Detail
Alliance Variant
Chr1:130563477 C4bp mRNA-UTR
Rr417940 1532 bp distal
SNP C/G G G G G G G C G C G
rs4222599
MGI SNP Detail
Alliance Variant
Chr1:130563485 C4bp mRNA-UTR
Rr417940 1540 bp distal
SNP A/G A A A A A A A G
rs4222600
MGI SNP Detail
Alliance Variant
Chr1:130563498 C4bp mRNA-UTR
Rr417940 1553 bp distal
SNP A/G A A A A A G A G G
rs4222601
MGI SNP Detail
Alliance Variant
Chr1:130563507 C4bp mRNA-UTR
Rr417940 1562 bp distal
SNP C/G G G G G G C G C C
rs4222602
MGI SNP Detail
Alliance Variant
Chr1:130563555 C4bp mRNA-UTR
Rr417940 1610 bp distal
SNP A/G G G G G G G G A G G G A A G G A G
rs4222603
MGI SNP Detail
Alliance Variant
Chr1:130563612 C4bp mRNA-UTR
Rr417940 1667 bp distal
SNP C/T C C C C C C C T C C C T T T C C T T T
rs4222604
MGI SNP Detail
Alliance Variant
Chr1:130563633 C4bp mRNA-UTR
Rr417940 1688 bp distal
SNP C/T T T T T T T T C
rs4222605
MGI SNP Detail
Alliance Variant
Chr1:130563671 C4bp mRNA-UTR
Rr417940 1726 bp distal
SNP A/G G G G G G G G A
rs4222606
MGI SNP Detail
Alliance Variant
Chr1:130563689 C4bp mRNA-UTR
Rr417940 1744 bp distal
SNP A/C A A A A A A A C
rs4222607
MGI SNP Detail
Alliance Variant
Chr1:130563692 C4bp mRNA-UTR
Rr417940 1747 bp distal
SNP C/T C C C C C C C T C C C C C T C
rs4222608
MGI SNP Detail
Alliance Variant
Chr1:130563712 C4bp mRNA-UTR
Rr417940 1767 bp distal
SNP A/G A A A A A A A G A A A G A A G G
rs30828240
MGI SNP Detail
Alliance Variant
Chr1:130563746 C4bp mRNA-UTR
Rr417940 1801 bp distal
SNP A/G G G G G G G G G G G A A G G A
rs4222609
MGI SNP Detail
Alliance Variant
Chr1:130563752 C4bp mRNA-UTR
Rr417940 1807 bp distal
SNP A/T A A A A A A A T
rs4222610
MGI SNP Detail
Alliance Variant
Chr1:130563799 C4bp mRNA-UTR
Rr417940 1854 bp distal
SNP A/C A A A A A A C A C A
rs30828239
MGI SNP Detail
Alliance Variant
Chr1:130563889 C4bp mRNA-UTR
Rr417940 1944 bp distal
SNP A/C A A A A A A A A A A C C A A C A
rs3090273
MGI SNP Detail
Alliance Variant
Chr1:130563941 C4bp mRNA-UTR
Rr417940 1996 bp distal
SNP C/T C C C C C C C C C C T C C C C C C C C
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Showing SNP(s) 1 - 46 of 46

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory