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Mouse SNP Summary
Symbol
Name
ID 		Rr417952
regulatory region 417952
MGI:7880084

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs245214933
MGI SNP Detail		 Chr1:130659573 Rr417949 within coordinates of
Rr417952 1983 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251955314
MGI SNP Detail		 Chr1:130659673 Rr417949 within coordinates of
Rr417952 1883 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs219272428
MGI SNP Detail		 Chr1:130659689 Rr417949 within coordinates of
Rr417952 1867 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs582830999
MGI SNP Detail		 Chr1:130659702 Rr417949 within coordinates of
Rr417952 1854 bp proximal
Tssr8565 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs238286792
MGI SNP Detail		 Chr1:130659703 Rr417949 within coordinates of
Rr417952 1853 bp proximal
Tssr8565 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs586066626
MGI SNP Detail
Alliance Variant		 Chr1:130659707 AA986860 mRNA-UTR
Rr417949 within coordinates of
Rr417952 1849 bp proximal
Tssr8565 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs253688989
MGI SNP Detail
Alliance Variant		 Chr1:130659711 AA986860 mRNA-UTR
Rr417949 within coordinates of
Rr417952 1845 bp proximal
Tssr8565 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224123375
MGI SNP Detail
Alliance Variant		 Chr1:130659712 AA986860 mRNA-UTR
Rr417949 within coordinates of
Rr417952 1844 bp proximal
Tssr8565 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs249714603
MGI SNP Detail
Alliance Variant		 Chr1:130659717 AA986860 mRNA-UTR
Rr417949 within coordinates of
Rr417952 1839 bp proximal
Tssr8565 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs264263257
MGI SNP Detail
Alliance Variant		 Chr1:130659787 AA986860 mRNA-UTR
Rr417950 within coordinates of
Rr417952 1769 bp proximal
Tssr8566 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs232529111
MGI SNP Detail
Alliance Variant		 Chr1:130659876 AA986860 mRNA-UTR
AA986860 Noncoding-Transcript-Variant
Rr417950 within coordinates of
Rr417952 1680 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253515381
MGI SNP Detail
Alliance Variant		 Chr1:130659890 AA986860 mRNA-UTR
AA986860 Noncoding-Transcript-Variant
Rr417950 within coordinates of
Rr417952 1666 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260820861
MGI SNP Detail
Alliance Variant		 Chr1:130659896 AA986860 mRNA-UTR
AA986860 Noncoding-Transcript-Variant
Rr417950 within coordinates of
Rr417952 1660 bp proximal
 SNP C C C
rs226804971
MGI SNP Detail
Alliance Variant		 Chr1:130659925 AA986860 mRNA-UTR
AA986860 Noncoding-Transcript-Variant
Rr417950 within coordinates of
Rr417952 1631 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs30822455
MGI SNP Detail
Alliance Variant		 Chr1:130659929 AA986860 mRNA-UTR
AA986860 Noncoding-Transcript-Variant
Rr417950 within coordinates of
Rr417952 1627 bp proximal
 SNP A/C C C C C C C C C C C C C A C
rs213019454
MGI SNP Detail
Alliance Variant		 Chr1:130660010 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417950 within coordinates of
Rr417952 1546 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs30822454
MGI SNP Detail
Alliance Variant		 Chr1:130660071 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417950 within coordinates of
Rr417952 1485 bp proximal
 SNP A/G A A A A A A A A A A G A A G A
rs264236401
MGI SNP Detail
Alliance Variant		 Chr1:130660082 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417950 within coordinates of
Rr417952 1474 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs215808668
MGI SNP Detail
Alliance Variant		 Chr1:130660113 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417950 within coordinates of
Rr417952 1443 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs241241777
MGI SNP Detail
Alliance Variant		 Chr1:130660128 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417950 within coordinates of
Rr417952 1428 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251905493
MGI SNP Detail
Alliance Variant		 Chr1:130660181 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417950 within coordinates of
Rr417952 1375 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs30829432
MGI SNP Detail
Alliance Variant		 Chr1:130660197 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417950 within coordinates of
Rr417952 1359 bp proximal
 SNP C/G C C C C C C C C C C G C C G C
rs30829431
MGI SNP Detail
Alliance Variant		 Chr1:130660200 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417950 within coordinates of
Rr417952 1356 bp proximal
 SNP A/G A A A A A G A A A A A A
rs248084805
MGI SNP Detail
Alliance Variant		 Chr1:130660234 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417950 within coordinates of
Rr417952 1322 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs220742760
MGI SNP Detail
Alliance Variant		 Chr1:130660263 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417950 within coordinates of
Rr417952 1293 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs247150417
MGI SNP Detail
Alliance Variant		 Chr1:130660332 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417950 within coordinates of
Rr417952 1224 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs585721687
MGI SNP Detail
Alliance Variant		 Chr1:130660357 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417950 within coordinates of
Rr417952 1199 bp proximal
Tssr13523 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T T T T T T C T T T T T T T T T T T T T T T T
rs583902494
MGI SNP Detail
Alliance Variant		 Chr1:130660390 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417952 1166 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs266089309
MGI SNP Detail
Alliance Variant		 Chr1:130660399 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417952 1157 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs223900799
MGI SNP Detail
Alliance Variant		 Chr1:130660410 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417952 1146 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs6308378
MGI SNP Detail
Alliance Variant		 Chr1:130660455 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417952 1101 bp proximal
 SNP G/T T T T T T T T G G T T T G T T G G
rs6308410
MGI SNP Detail
Alliance Variant		 Chr1:130660471 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417951 within coordinates of
Rr417952 1085 bp proximal
 SNP G/T G T T T
rs6309429
MGI SNP Detail
Alliance Variant		 Chr1:130660638 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417951 within coordinates of
Rr417952 918 bp proximal
 SNP A/G G G G G G G G G A G G G A G G A G
rs6309584
MGI SNP Detail
Alliance Variant		 Chr1:130660727 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417951 within coordinates of
Rr417952 829 bp proximal
 SNP A/C C C C C C C C C A C C C A C C A C
rs257046230
MGI SNP Detail
Alliance Variant		 Chr1:130660792 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417951 within coordinates of
Rr417952 764 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs30829430
MGI SNP Detail
Alliance Variant		 Chr1:130660817 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417951 within coordinates of
Rr417952 739 bp proximal
 SNP G/T T T T T T T G T T T T T T T T
rs6310522
MGI SNP Detail
Alliance Variant		 Chr1:130660860 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417951 within coordinates of
Rr417952 696 bp proximal
 SNP C/T T C
rs6323288
MGI SNP Detail
Alliance Variant		 Chr1:130660947 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417951 within coordinates of
Rr417952 609 bp proximal
 SNP C/T T T T T T T T T C T T T C T T C T
rs6323298
MGI SNP Detail
Alliance Variant		 Chr1:130660960 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417951 within coordinates of
Rr417952 596 bp proximal
 SNP A/T A A A A A A A T T A A A T A A T A
rs243917137
MGI SNP Detail
Alliance Variant		 Chr1:130660971 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417951 within coordinates of
Rr417952 585 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213591300
MGI SNP Detail
Alliance Variant		 Chr1:130660993 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417951 within coordinates of
Rr417952 563 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs232114353
MGI SNP Detail
Alliance Variant		 Chr1:130660994 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417951 within coordinates of
Rr417952 562 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A
rs6323394
MGI SNP Detail
Alliance Variant		 Chr1:130661013 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417951 within coordinates of
Rr417952 543 bp proximal
 SNP C/T T C
rs221311747
MGI SNP Detail
Alliance Variant		 Chr1:130661060 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417951 within coordinates of
Rr417952 496 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs30829429
MGI SNP Detail
Alliance Variant		 Chr1:130661102 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417951 within coordinates of
Rr417952 454 bp proximal
 SNP C/T C C C C C C C C C C T C C T C
rs260697481
MGI SNP Detail
Alliance Variant		 Chr1:130661142 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417951 within coordinates of
Rr417952 414 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs223954954
MGI SNP Detail
Alliance Variant		 Chr1:130661364 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417951 within coordinates of
Rr417952 192 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs240958466
MGI SNP Detail
Alliance Variant		 Chr1:130661412 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417951 within coordinates of
Rr417952 144 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs257229363
MGI SNP Detail
Alliance Variant		 Chr1:130661429 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417951 within coordinates of
Rr417952 127 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs30829428
MGI SNP Detail
Alliance Variant		 Chr1:130661433 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417951 within coordinates of
Rr417952 123 bp proximal
 SNP C/G C C C C C C C C C C G C C G C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs237624669
MGI SNP Detail
Alliance Variant		 Chr1:130661449 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417951 within coordinates of
Rr417952 107 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs264966763
MGI SNP Detail
Alliance Variant		 Chr1:130661487 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417951 within coordinates of
Rr417952 69 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233368058
MGI SNP Detail
Alliance Variant		 Chr1:130661489 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417951 within coordinates of
Rr417952 67 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs260502650
MGI SNP Detail
Alliance Variant		 Chr1:130661505 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417951 within coordinates of
Rr417952 51 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs263247843
MGI SNP Detail
Alliance Variant		 Chr1:130661515 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417951 within coordinates of
Rr417952 41 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs233317337
MGI SNP Detail
Alliance Variant		 Chr1:130661531 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417951 within coordinates of
Rr417952 25 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs243874187
MGI SNP Detail
Alliance Variant		 Chr1:130661541 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417951 within coordinates of
Rr417952 15 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs214489172
MGI SNP Detail
Alliance Variant		 Chr1:130661565 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417952 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs230092916
MGI SNP Detail
Alliance Variant		 Chr1:130661604 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417952 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G A G G G G
rs242268191
MGI SNP Detail
Alliance Variant		 Chr1:130661616 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417952 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs213291912
MGI SNP Detail
Alliance Variant		 Chr1:130661637 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417952 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs239352737
MGI SNP Detail
Alliance Variant		 Chr1:130661842 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417952 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30829427
MGI SNP Detail
Alliance Variant		 Chr1:130661981 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417952 within coordinates of
 SNP C/T C C C C C C C C C C T C C T C
rs30829426
MGI SNP Detail
Alliance Variant		 Chr1:130662016 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417952 within coordinates of
 SNP C/T C C C C C C C C C C T C C T C
rs234571911
MGI SNP Detail
Alliance Variant		 Chr1:130662085 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417952 29 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs251044953
MGI SNP Detail
Alliance Variant		 Chr1:130662089 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417952 33 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs219953930
MGI SNP Detail
Alliance Variant		 Chr1:130662096 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417952 40 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236916551
MGI SNP Detail
Alliance Variant		 Chr1:130662111 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417952 55 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T
rs30829425
MGI SNP Detail
Alliance Variant		 Chr1:130662129 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417952 73 bp distal
 SNP C/T T T T T T T C T T T C T T C C
rs216446840
MGI SNP Detail
Alliance Variant		 Chr1:130662133 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417952 77 bp distal
 SNP T T T
rs30829424
MGI SNP Detail
Alliance Variant		 Chr1:130662140 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417952 84 bp distal
 SNP C/T C C C C C C T C C C T C C T T
rs265582353
MGI SNP Detail
Alliance Variant		 Chr1:130662153 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417952 97 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs30828673
MGI SNP Detail
Alliance Variant		 Chr1:130662155 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417952 99 bp distal
 SNP C/T T T T T T T C T T T C C T T C C
rs237739827
MGI SNP Detail
Alliance Variant		 Chr1:130662276 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417952 220 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs256547982
MGI SNP Detail
Alliance Variant		 Chr1:130662394 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417952 338 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs30828672
MGI SNP Detail
Alliance Variant		 Chr1:130662402 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417952 346 bp distal
 SNP A/G G G G G G G A G G G A G G G
rs30828671
MGI SNP Detail
Alliance Variant		 Chr1:130662408 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417952 352 bp distal
 SNP A/G A A A A A A A A A A G A A G A
rs30828670
MGI SNP Detail
Alliance Variant		 Chr1:130662414 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417952 358 bp distal
 SNP A/G G G G G G G A G G G G G G G G
rs234077532
MGI SNP Detail
Alliance Variant		 Chr1:130662486 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417952 430 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs254559419
MGI SNP Detail
Alliance Variant		 Chr1:130662605 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417952 549 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs216000074
MGI SNP Detail
Alliance Variant		 Chr1:130662607 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417952 551 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs234682438
MGI SNP Detail
Alliance Variant		 Chr1:130662626 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417952 570 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs251010801
MGI SNP Detail
Alliance Variant		 Chr1:130662707 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417952 651 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs30828669
MGI SNP Detail
Alliance Variant		 Chr1:130662786 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417952 730 bp distal
 SNP A/G A A A A A A A A A A G A A G A
rs229623895
MGI SNP Detail
Alliance Variant		 Chr1:130662838 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417952 782 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs261283550
MGI SNP Detail
Alliance Variant		 Chr1:130662916 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417952 860 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30828668
MGI SNP Detail
Alliance Variant		 Chr1:130662973 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417952 917 bp distal
 SNP C/T C C C C C C C C C C C C C C T
rs251884218
MGI SNP Detail
Alliance Variant		 Chr1:130662985 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417952 929 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs259039428
MGI SNP Detail
Alliance Variant		 Chr1:130663018 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417952 962 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs221606717
MGI SNP Detail
Alliance Variant		 Chr1:130663019 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417952 963 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30828667
MGI SNP Detail
Alliance Variant		 Chr1:130663046 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417952 990 bp distal
 SNP A/G G G G G G G A G G G G G G G G
rs256499130
MGI SNP Detail
Alliance Variant		 Chr1:130663094 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417952 1038 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs223647171
MGI SNP Detail
Alliance Variant		 Chr1:130663148 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417952 1092 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs587312546
MGI SNP Detail
Alliance Variant		 Chr1:130663227 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417952 1171 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs579898946
MGI SNP Detail
Alliance Variant		 Chr1:130663236 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417952 1180 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T
rs583309269
MGI SNP Detail
Alliance Variant		 Chr1:130663248 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417952 1192 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs586699947
MGI SNP Detail
Alliance Variant		 Chr1:130663256 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417952 1200 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs242217535
MGI SNP Detail
Alliance Variant		 Chr1:130663272 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417952 1216 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265949430
MGI SNP Detail
Alliance Variant		 Chr1:130663278 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417952 1222 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs233976346
MGI SNP Detail
Alliance Variant		 Chr1:130663292 AA986860 Intron
AA986860 Noncoding-Transcript-Variant
Rr417952 1236 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
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Showing SNP(s) 1 - 100 of 115
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory