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Mouse SNP Summary
Symbol
Name
ID
Rr419879
regulatory region 419879
MGI:7882011

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Showing SNP(s) 1 - 100 of 107

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SNP Density Heatmap
Chr1 from 140,457,453 bp to 140,461,474 bp
(4,022 bp)
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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs45963605
MGI SNP Detail
Alliance Variant
Chr1:140457518 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1935 bp proximal
SNP A/G G G G G G A G G G G G
rs251689092
MGI SNP Detail
Alliance Variant
Chr1:140457657 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1796 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs265134729
MGI SNP Detail
Alliance Variant
Chr1:140457658 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1795 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A T A A A A A A A A A A A A A A A A A A A A T A A A A
rs232650739
MGI SNP Detail
Alliance Variant
Chr1:140457665 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1788 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs247762758
MGI SNP Detail
Alliance Variant
Chr1:140457714 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1739 bp proximal
SNP T T T
rs217611148
MGI SNP Detail
Alliance Variant
Chr1:140457829 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1624 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs233980209
MGI SNP Detail
Alliance Variant
Chr1:140457926 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1527 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C G C C C C
rs242798528
MGI SNP Detail
Alliance Variant
Chr1:140457935 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1518 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs211836414
MGI SNP Detail
Alliance Variant
Chr1:140457944 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1509 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T G T T T T
rs49934250
MGI SNP Detail
Alliance Variant
Chr1:140457958 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1495 bp proximal
SNP C/T C C C C C T C C C C C
rs256873651
MGI SNP Detail
Alliance Variant
Chr1:140458006 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1447 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T T T T T T T T T T T T T T T T T C T T T T
rs224996970
MGI SNP Detail
Alliance Variant
Chr1:140458007 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1446 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237781404
MGI SNP Detail
Alliance Variant
Chr1:140458020 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1433 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs583881784
MGI SNP Detail
Alliance Variant
Chr1:140458031 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1422 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs587330253
MGI SNP Detail
Alliance Variant
Chr1:140458048 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1405 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs255228777
MGI SNP Detail
Alliance Variant
Chr1:140458065 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1388 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C A C C C C C C A C C C C C C C C C C C C
rs32090941
MGI SNP Detail
Alliance Variant
Chr1:140458214 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1239 bp proximal
SNP C/T T T T C C T C T C T T C T T
rs31193349
MGI SNP Detail
Alliance Variant
Chr1:140458245 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1208 bp proximal
SNP G/T T T T G G T G T T T G T T
rs256808616
MGI SNP Detail
Alliance Variant
Chr1:140458258 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1195 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs30984300
MGI SNP Detail
Alliance Variant
Chr1:140458319 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1134 bp proximal
SNP A/G A A G G
rs247035539
MGI SNP Detail
Alliance Variant
Chr1:140458328 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1125 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262474961
MGI SNP Detail
Alliance Variant
Chr1:140458332 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1121 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs233409267
MGI SNP Detail
Alliance Variant
Chr1:140458353 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1100 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs245548824
MGI SNP Detail
Alliance Variant
Chr1:140458445 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1008 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260235448
MGI SNP Detail
Alliance Variant
Chr1:140458702 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 751 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs228885906
MGI SNP Detail
Alliance Variant
Chr1:140458718 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 735 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs243429630
MGI SNP Detail
Alliance Variant
Chr1:140458873 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 580 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs211707574
MGI SNP Detail
Alliance Variant
Chr1:140458917 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 536 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs230645335
MGI SNP Detail
Alliance Variant
Chr1:140458937 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 516 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254936527
MGI SNP Detail
Alliance Variant
Chr1:140458970 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 483 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs216454619
MGI SNP Detail
Alliance Variant
Chr1:140458982 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 471 bp proximal
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs239809852
MGI SNP Detail
Alliance Variant
Chr1:140458983 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 470 bp proximal
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs255194446
MGI SNP Detail
Alliance Variant
Chr1:140458991 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 462 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs216576761
MGI SNP Detail
Alliance Variant
Chr1:140459014 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 439 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T G T T T T T T T G T T T T T T T T T T T T T T T T T T T T
rs230537322
MGI SNP Detail
Alliance Variant
Chr1:140459017 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 436 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A G A A A A A A A G A A A A A A A A A A A A A A A A G A A A A
rs249604611
MGI SNP Detail
Alliance Variant
Chr1:140459031 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 422 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A
rs220171472
MGI SNP Detail
Alliance Variant
Chr1:140459065 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 388 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C
rs244243293
MGI SNP Detail
Alliance Variant
Chr1:140459071 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 382 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262104161
MGI SNP Detail
Alliance Variant
Chr1:140459077 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 376 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G
rs225180864
MGI SNP Detail
Alliance Variant
Chr1:140459164 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 289 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239499962
MGI SNP Detail
Alliance Variant
Chr1:140459229 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 224 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C T C C C C
rs260100839
MGI SNP Detail
Alliance Variant
Chr1:140459527 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419878 within coordinates of
Rr419879 53 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C A C C C C C C A C C C C C C C A C C C C
rs579992899
MGI SNP Detail
Alliance Variant
Chr1:140459548 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419878 within coordinates of
Rr419879 74 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs583777240
MGI SNP Detail
Alliance Variant
Chr1:140459551 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419878 within coordinates of
Rr419879 77 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs580712130
MGI SNP Detail
Alliance Variant
Chr1:140459570 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419878 within coordinates of
Rr419879 96 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs228759310
MGI SNP Detail
Alliance Variant
Chr1:140459588 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 114 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A A A A A C A A A A A A A C A A A A
rs237042689
MGI SNP Detail
Alliance Variant
Chr1:140459591 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 117 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31724435
MGI SNP Detail
Alliance Variant
Chr1:140459620 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 146 bp distal
SNP C/T C C C C C T C T C T C T T C T
rs230765288
MGI SNP Detail
Alliance Variant
Chr1:140459745 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 271 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250416719
MGI SNP Detail
Alliance Variant
Chr1:140459750 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 276 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs51286204
MGI SNP Detail
Alliance Variant
Chr1:140459751 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 277 bp distal
SNP A/G G G G G G G G G G G A G G G G
rs216900220
MGI SNP Detail
Alliance Variant
Chr1:140459777 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 303 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A
rs227091585
MGI SNP Detail
Alliance Variant
Chr1:140459779 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 305 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs32806794
MGI SNP Detail
Alliance Variant
Chr1:140459804 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 330 bp distal
SNP C/T C C C T T T C T C T C T C T C C T
rs216538646
MGI SNP Detail
Alliance Variant
Chr1:140459858 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 384 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs50531753
MGI SNP Detail
Alliance Variant
Chr1:140459959 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 485 bp distal
SNP C/T T T T T T T C T T T T T T T T
rs249567037
MGI SNP Detail
Alliance Variant
Chr1:140459975 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 501 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214773051
MGI SNP Detail
Alliance Variant
Chr1:140460075 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 601 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C A C C C C C C C C C C C C C C C C C C C C A C C C C
rs239057839
MGI SNP Detail
Alliance Variant
Chr1:140460119 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 645 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T A T T T T T T T T T T T T T T T T T T T T A T T T T
rs257198559
MGI SNP Detail
Alliance Variant
Chr1:140460131 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 657 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs225308309
MGI SNP Detail
Alliance Variant
Chr1:140460151 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 677 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs239363502
MGI SNP Detail
Alliance Variant
Chr1:140460164 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 690 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs253359927
MGI SNP Detail
Alliance Variant
Chr1:140460186 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 712 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs222163174
MGI SNP Detail
Alliance Variant
Chr1:140460202 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 728 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C
rs237009869
MGI SNP Detail
Alliance Variant
Chr1:140460206 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 732 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs264748276
MGI SNP Detail
Alliance Variant
Chr1:140460243 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 769 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T T T T T T T T T T T T T T T T C T T T T
rs231308139
MGI SNP Detail
Alliance Variant
Chr1:140460274 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 800 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T
rs246398611
MGI SNP Detail
Alliance Variant
Chr1:140460310 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 836 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A C A A A A A A A A A A A A A A A A A A A A C A A A A
rs584265856
MGI SNP Detail
Alliance Variant
Chr1:140460317 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 843 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C
rs263388460
MGI SNP Detail
Alliance Variant
Chr1:140460347 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 873 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs227060376
MGI SNP Detail
Alliance Variant
Chr1:140460370 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 896 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs248547831
MGI SNP Detail
Alliance Variant
Chr1:140460395 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 921 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G G G G G G G G G G G G G G G G G A G G G G
rs260471343
MGI SNP Detail
Alliance Variant
Chr1:140460493 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1019 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224842876
MGI SNP Detail
Alliance Variant
Chr1:140460497 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1023 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs249074646
MGI SNP Detail
Alliance Variant
Chr1:140460501 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1027 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C G C C C C C C G C C C C C C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs51652649
MGI SNP Detail
Alliance Variant
Chr1:140460550 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1076 bp distal
SNP A/G G G G G G G G G G A G G A G
rs236142110
MGI SNP Detail
Alliance Variant
Chr1:140460551 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1077 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs258230419
MGI SNP Detail
Alliance Variant
Chr1:140460573 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1099 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs215964599
MGI SNP Detail
Alliance Variant
Chr1:140460675 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1201 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A
rs232940032
MGI SNP Detail
Alliance Variant
Chr1:140460682 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1208 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs253324418
MGI SNP Detail
Alliance Variant
Chr1:140460699 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1225 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C
rs222135701
MGI SNP Detail
Alliance Variant
Chr1:140460750 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1276 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs48061147
MGI SNP Detail
Alliance Variant
Chr1:140460754 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1280 bp distal
SNP C/G G G G G G G G G G G C G G C G
rs255712878
MGI SNP Detail
Alliance Variant
Chr1:140460793 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1319 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs223466765
MGI SNP Detail
Alliance Variant
Chr1:140460856 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1382 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T
rs243567464
MGI SNP Detail
Alliance Variant
Chr1:140460875 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1401 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs265818010
MGI SNP Detail
Alliance Variant
Chr1:140460916 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1442 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A
rs220705192
MGI SNP Detail
Alliance Variant
Chr1:140460935 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1461 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs242496591
MGI SNP Detail
Alliance Variant
Chr1:140460953 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1479 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C
rs260438221
MGI SNP Detail
Alliance Variant
Chr1:140460959 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1485 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A
rs47071927
MGI SNP Detail
Alliance Variant
Chr1:140460964 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1490 bp distal
SNP C/T C C C C C C C C C T C C C
rs252198750
MGI SNP Detail
Alliance Variant
Chr1:140460976 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1502 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T G T T T T T T T T T T T T T T T T T T T G T T T T
rs262695837
MGI SNP Detail
Alliance Variant
Chr1:140460977 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1503 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T A T T T T T T T T T T T T T T T T T T T A T T T T
rs52495991
MGI SNP Detail
Alliance Variant
Chr1:140461072 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1598 bp distal
SNP C/T C C C C C C C C C T C C C
rs230076528
MGI SNP Detail
Alliance Variant
Chr1:140461088 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1614 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs48291847
MGI SNP Detail
Alliance Variant
Chr1:140461115 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1641 bp distal
SNP A/G G G G A A
rs215189687
MGI SNP Detail
Alliance Variant
Chr1:140461135 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1661 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs45985356
MGI SNP Detail
Alliance Variant
Chr1:140461141 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1667 bp distal
SNP A/G A A A A G A A A A G A G A A G A
rs247564125
MGI SNP Detail
Alliance Variant
Chr1:140461192 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1718 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs216741408
MGI SNP Detail
Alliance Variant
Chr1:140461200 Kcnt2 Intron
Kcnt2 Noncoding-Transcript-Variant
Rr419879 1726 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
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Showing SNP(s) 1 - 100 of 107

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory