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Mouse SNP Summary
Symbol
Name
ID 		Rr420196
regulatory region 420196
MGI:7882328

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs261322633
MGI SNP Detail
Alliance Variant		 Chr1:150868276 Hmcn1 Intron
Hmcn1 Noncoding-Transcript-Variant
Rr420192 within coordinates of
Rr420196 1978 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs224341160
MGI SNP Detail
Alliance Variant		 Chr1:150868331 Hmcn1 Intron
Hmcn1 Noncoding-Transcript-Variant
Rr420192 within coordinates of
Rr420196 1923 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs584929025
MGI SNP Detail
Alliance Variant		 Chr1:150868412 Hmcn1 Intron
Hmcn1 Noncoding-Transcript-Variant
Rr420196 1842 bp proximal
 SNP C/T T T T T C T T T C T T T T T T T T T T C T T C T T T T C T T T C T C T C T T T T C T T T T T T C T T T T T
rs386995561
MGI SNP Detail
Alliance Variant		 Chr1:150868500 Hmcn1 Intron
Hmcn1 Noncoding-Transcript-Variant
Rr420196 1754 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G A G G G A G A
rs244236160
MGI SNP Detail
Alliance Variant		 Chr1:150868715 Hmcn1 Coding-NonSynonymous
Hmcn1 Noncoding-Transcript-Variant
Rr420196 1539 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs213659401
MGI SNP Detail
Alliance Variant		 Chr1:150868734 Hmcn1 Coding-NonSynonymous
Hmcn1 Noncoding-Transcript-Variant
Rr420196 1520 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs231159768
MGI SNP Detail
Alliance Variant		 Chr1:150868782 Hmcn1 Coding-Synonymous
Hmcn1 Noncoding-Transcript-Variant
Rr420196 1472 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs252123991
MGI SNP Detail
Alliance Variant		 Chr1:150869106 Cpgi846 within coordinates of
Hmcn1 mRNA-UTR
Hmcn1 Noncoding-Transcript-Variant
Rr420193 within coordinates of
Rr420196 1148 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs217015200
MGI SNP Detail
Alliance Variant		 Chr1:150869116 Cpgi846 within coordinates of
Hmcn1 mRNA-UTR
Hmcn1 Noncoding-Transcript-Variant
Rr420193 within coordinates of
Rr420196 1138 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G
rs31127864
MGI SNP Detail
Alliance Variant		 Chr1:150869150 Cpgi846 within coordinates of
Hmcn1 mRNA-UTR
Hmcn1 Noncoding-Transcript-Variant
Rr420193 within coordinates of
Rr420196 1104 bp proximal
 SNP G/T G T G G G G
rs31127093
MGI SNP Detail
Alliance Variant		 Chr1:150869182 Cpgi846 within coordinates of
Hmcn1 mRNA-UTR
Hmcn1 Noncoding-Transcript-Variant
Rr420193 within coordinates of
Rr420196 1072 bp proximal
Tssr14168 within coordinates of
 SNP C/T C T C C C C T C T T
rs31127092
MGI SNP Detail
Alliance Variant		 Chr1:150869217 Cpgi846 within coordinates of
Hmcn1 mRNA-UTR
Hmcn1 Noncoding-Transcript-Variant
Rr420193 within coordinates of
Rr420196 1037 bp proximal
 SNP C/T T C T C T T T C C
rs230453820
MGI SNP Detail
Alliance Variant		 Chr1:150869233 Cpgi846 within coordinates of
Hmcn1 mRNA-UTR
Hmcn1 Noncoding-Transcript-Variant
Rr420193 within coordinates of
Rr420196 1021 bp proximal
 SNP C/T C C C C T C C C T C C C C C C C C C C C C C C C C C T C C C T C T C T C C C C C C C C C C C T C C C C C
rs249388528
MGI SNP Detail
Alliance Variant		 Chr1:150869234 Cpgi846 within coordinates of
Hmcn1 mRNA-UTR
Hmcn1 Noncoding-Transcript-Variant
Rr420193 within coordinates of
Rr420196 1020 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs222897754
MGI SNP Detail
Alliance Variant		 Chr1:150869235 Cpgi846 within coordinates of
Hmcn1 mRNA-UTR
Hmcn1 Noncoding-Transcript-Variant
Rr420193 within coordinates of
Rr420196 1019 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs247306475
MGI SNP Detail
Alliance Variant		 Chr1:150869308 Cpgi846 within coordinates of
Hmcn1 mRNA-UTR
Hmcn1 Noncoding-Transcript-Variant
Rr420196 946 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs258870190
MGI SNP Detail
Alliance Variant		 Chr1:150869363 Cpgi846 within coordinates of
Gm29188 within coordinates of
Hmcn1 mRNA-UTR
Hmcn1 Noncoding-Transcript-Variant
Rr420196 891 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs387359369
MGI SNP Detail
Alliance Variant		 Chr1:150869367 Cpgi846 within coordinates of
Gm29188 within coordinates of
Hmcn1 mRNA-UTR
Hmcn1 Noncoding-Transcript-Variant
Rr420196 887 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G A G G G A G
rs225584106
MGI SNP Detail
Alliance Variant		 Chr1:150869370 Cpgi846 within coordinates of
Gm29188 within coordinates of
Hmcn1 mRNA-UTR
Hmcn1 Noncoding-Transcript-Variant
Rr420196 884 bp proximal
 SNP C/T T T T C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C T T C C C C C C C C C C C C C C
rs31127091
MGI SNP Detail
Alliance Variant		 Chr1:150869421 Cpgi846 within coordinates of
Gm29188 within coordinates of
Hmcn1 mRNA-UTR
Hmcn1 Noncoding-Transcript-Variant
Rr420196 833 bp proximal
 SNP C/T C T C T C C T C T T
rs31127090
MGI SNP Detail
Alliance Variant		 Chr1:150869495 Cpgi846 within coordinates of
Gm29188 within coordinates of
Hmcn1 mRNA-UTR
Hmcn1 Noncoding-Transcript-Variant
Rr420196 759 bp proximal
 SNP C/T T C T T T T C T C
rs224276233
MGI SNP Detail		 Chr1:150869569 Gm29188 within coordinates of
Rr420196 685 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs238104638
MGI SNP Detail		 Chr1:150869617 Gm29188 within coordinates of
Rr420194 within coordinates of
Rr420196 637 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs265097780
MGI SNP Detail		 Chr1:150869646 Gm29188 within coordinates of
Rr420196 608 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs31127089
MGI SNP Detail		 Chr1:150869650 Gm29188 within coordinates of
Rr420196 604 bp proximal
 SNP A/T A A T A T T A T A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs31127088
MGI SNP Detail		 Chr1:150869686 Gm29188 within coordinates of
Rr420196 568 bp proximal
 SNP A/G G G G A G G G G G
rs387435092
MGI SNP Detail		 Chr1:150869688 Gm29188 within coordinates of
Rr420196 566 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G C G G G C G G
rs582738487
MGI SNP Detail		 Chr1:150869718 Gm29188 within coordinates of
Rr420196 536 bp proximal
 SNP G/T T T T T G T T T G T T T T T T T T T T G T T G T T T T T T T G T G T G T T T T G T T T T T T G T T T T
rs585291202
MGI SNP Detail		 Chr1:150869719 Gm29188 within coordinates of
Rr420196 535 bp proximal
 SNP G/T T T T T G T T T G T T T T T T T T T T G T T G T T T T T T T G T G T G T T T T G T T T T T T G T T T T
rs578918885
MGI SNP Detail		 Chr1:150869720 Gm29188 within coordinates of
Rr420196 534 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs582539329
MGI SNP Detail		 Chr1:150869728 Gm29188 within coordinates of
Rr420195 within coordinates of
Rr420196 526 bp proximal
 SNP A/C/T C C C C A C C C A C C C C C C C C C C A C C A C C C C C C C A C A C A C C C C A C C C C C C A T C C C C
rs216529879
MGI SNP Detail		 Chr1:150869733 Gm29188 within coordinates of
Rr420195 within coordinates of
Rr420196 521 bp proximal
 SNP A/G A A A A G A A A G A A A A A A A A A A G A A G A A A A G A A A G A G A G A A A A G A A A A A A G G A A A
rs233955050
MGI SNP Detail		 Chr1:150869739 Gm29188 within coordinates of
Rr420195 within coordinates of
Rr420196 515 bp proximal
 SNP A/G A A A A G A A A G A A A A A A A A A A G A A G A A A A G A A A G A G A G A A A A G A A A A A A G G A A A A
rs247209260
MGI SNP Detail		 Chr1:150869761 Gm29188 within coordinates of
Rr420196 493 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs211806295
MGI SNP Detail		 Chr1:150869774 Gm29188 within coordinates of
Rr420196 480 bp proximal
 SNP A/G G G G G A G G G A G G G G G G G G G G A G G A G G G G A G G G A G A G A G G G G A G G G G G G A A G G G G
rs230529536
MGI SNP Detail		 Chr1:150869807 Gm29188 within coordinates of
Rr420196 447 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs243469905
MGI SNP Detail		 Chr1:150869817 Gm29188 within coordinates of
Rr420196 437 bp proximal
 SNP A/C A A A A C A A A C A A A A A A A A A A A A A C A A A A C A A A C A C A C A A A A C A A A A A A A A A A A
rs214763827
MGI SNP Detail		 Chr1:150869822 Gm29188 within coordinates of
Rr420196 432 bp proximal
 SNP A/G G G G G A G G G A G G G G G G G G G G A G G A G G G G A G G G G A G A G G G G A G G G G G G A G G G G
rs237395881
MGI SNP Detail		 Chr1:150869823 Gm29188 within coordinates of
Rr420196 431 bp proximal
 SNP A/G A A A A G A A A G A A A A A A A A A A G A A G A A A A G A A A A G A G A A A A G A A A A A A G A A A A
rs31565271
MGI SNP Detail		 Chr1:150869895 Gm29188 within coordinates of
Rr420196 359 bp proximal
 SNP C/T T C C C
rs584799039
MGI SNP Detail		 Chr1:150869937 Gm29188 within coordinates of
Rr420196 317 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G
rs582328693
MGI SNP Detail		 Chr1:150869938 Gm29188 within coordinates of
Rr420196 316 bp proximal
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs585017350
MGI SNP Detail		 Chr1:150869939 Gm29188 within coordinates of
Rr420196 315 bp proximal
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs579709324
MGI SNP Detail		 Chr1:150869942 Gm29188 within coordinates of
Rr420196 312 bp proximal
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs583955422
MGI SNP Detail		 Chr1:150869943 Gm29188 within coordinates of
Rr420196 311 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G
rs587384144
MGI SNP Detail		 Chr1:150869944 Gm29188 within coordinates of
Rr420196 310 bp proximal
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs238244465
MGI SNP Detail		 Chr1:150869951 Gm29188 within coordinates of
Rr420196 303 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A G A A G A A A A A A A A A A A A G A A A A A A A A A A
rs32099783
MGI SNP Detail		 Chr1:150869953 Gm29188 within coordinates of
Rr420196 301 bp proximal
 SNP A/G A G G G
rs223274556
MGI SNP Detail		 Chr1:150869963 Gm29188 within coordinates of
Rr420196 291 bp proximal
 SNP A/G A A A A G A A A G A A A A A A A A A A G A A G A A A A A A A A G A A A A A G A A A A A A A A A A A
rs247050008
MGI SNP Detail		 Chr1:150869974 Gm29188 within coordinates of
Rr420196 280 bp proximal
 SNP A/G G A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs213252405
MGI SNP Detail		 Chr1:150869982 Gm29188 within coordinates of
Rr420196 272 bp proximal
 SNP A/T A T
rs236896513
MGI SNP Detail		 Chr1:150870030 Gm29188 within coordinates of
Rr420196 224 bp proximal
 SNP A/G G A
rs255163010
MGI SNP Detail		 Chr1:150870033 Gm29188 within coordinates of
Rr420196 221 bp proximal
 SNP A/G G A
rs253790393
MGI SNP Detail		 Chr1:150870046 Gm29188 within coordinates of
Rr420196 208 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs31127087
MGI SNP Detail		 Chr1:150870164 Gm29188 within coordinates of
Rr420196 90 bp proximal
 SNP A/C A C A C C C A A
rs243644582
MGI SNP Detail		 Chr1:150870195 Gm29188 within coordinates of
Rr420196 59 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs31127086
MGI SNP Detail		 Chr1:150870197 Gm29188 within coordinates of
Rr420196 57 bp proximal
 SNP C/T C C T C C C C T
rs239606381
MGI SNP Detail		 Chr1:150870220 Gm29188 within coordinates of
Rr420196 34 bp proximal
 SNP A/G G G G G A G G G A G G G G G G G G G G G G G A G G G G A G G G A G A G A G G G G A G G G G G G A G G G G G
rs252683193
MGI SNP Detail		 Chr1:150870224 Gm29188 within coordinates of
Rr420196 30 bp proximal
 SNP A/T T T T T A T T T A T T T T T T T T T T T T T T T T T T A T T T A T A T A T T T T T T T T T T T A T T T T T
rs217567842
MGI SNP Detail		 Chr1:150870242 Gm29188 within coordinates of
Rr420196 12 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs235969651
MGI SNP Detail		 Chr1:150870245 Gm29188 within coordinates of
Rr420196 9 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs255479636
MGI SNP Detail		 Chr1:150870246 Gm29188 within coordinates of
Rr420196 8 bp proximal
 SNP A/G G G G G A G G G A G G G G G G G G G G A G G A G G G G A G G G A G A G A G G G G A G G G G G G A G G G G G
rs218407296
MGI SNP Detail		 Chr1:150870257 Gm29188 within coordinates of
Rr420196 within coordinates of
 SNP G/T T T T T G T T T G T T T T T T T T T T G T T G T T T T G T T T G T G T G T T T T G T T T T T T G G T T T T
rs263198465
MGI SNP Detail		 Chr1:150870263 Gm29188 within coordinates of
Rr420196 within coordinates of
 SNP C/G C G
rs262121737
MGI SNP Detail		 Chr1:150870264 Gm29188 within coordinates of
Rr420196 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220914448
MGI SNP Detail		 Chr1:150870268 Gm29188 within coordinates of
Rr420196 within coordinates of
 SNP A/T A T
rs247857132
MGI SNP Detail		 Chr1:150870297 Gm29188 within coordinates of
Rr420196 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs263620107
MGI SNP Detail		 Chr1:150870304 Gm29188 within coordinates of
Rr420196 within coordinates of
 SNP C/T T T T T C T T T C T T T T T T T T T T C T T C T T T T C T T T C T C T C T T T T C T T T T T T C T T T T T
rs242645194
MGI SNP Detail		 Chr1:150870320 Gm29188 within coordinates of
Rr420196 within coordinates of
 SNP C/T C T
rs31127085
MGI SNP Detail		 Chr1:150870349 Gm29188 within coordinates of
Rr420196 within coordinates of
 SNP C/T C C C C C C C T
rs31127084
MGI SNP Detail		 Chr1:150870435 Gm29188 within coordinates of
Rr420196 within coordinates of
 SNP C/G G C G C C C G G
rs242833086
MGI SNP Detail		 Chr1:150870532 Gm29188 within coordinates of
Rr420196 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs265234910
MGI SNP Detail		 Chr1:150870551 Gm29188 within coordinates of
Rr420196 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs218833932
MGI SNP Detail		 Chr1:150870552 Gm29188 within coordinates of
Rr420196 within coordinates of
 SNP G/T T G
rs257823035
MGI SNP Detail		 Chr1:150870577 Gm29188 within coordinates of
Rr420196 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs244152920
MGI SNP Detail		 Chr1:150870582 Gm29188 within coordinates of
Rr420196 within coordinates of
 SNP A/G A G
rs228815774
MGI SNP Detail		 Chr1:150870740 Gm29188 within coordinates of
Rr420196 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249225137
MGI SNP Detail		 Chr1:150870783 Gm29188 within coordinates of
Rr420196 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs262823343
MGI SNP Detail		 Chr1:150870801 Gm29188 within coordinates of
Rr420196 14 bp distal
 SNP A/C C A
rs231033679
MGI SNP Detail		 Chr1:150870873 Gm29188 within coordinates of
Rr420196 86 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257364447
MGI SNP Detail		 Chr1:150870900 Gm29188 within coordinates of
Rr420196 113 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31713090
MGI SNP Detail		 Chr1:150870911 Gm29188 within coordinates of
Rr420196 124 bp distal
 SNP A/G G G A G G G
rs238058199
MGI SNP Detail		 Chr1:150870930 Gm29188 within coordinates of
Rr420196 143 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs263372974
MGI SNP Detail		 Chr1:150870976 Gm29188 within coordinates of
Rr420196 189 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs246632312
MGI SNP Detail		 Chr1:150871001 Gm29188 within coordinates of
Rr420196 214 bp distal
 SNP C/T T C
rs248169336
MGI SNP Detail		 Chr1:150871024 Gm29188 within coordinates of
Rr420196 237 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs257370867
MGI SNP Detail		 Chr1:150871038 Gm29188 within coordinates of
Rr420196 251 bp distal
 SNP C/T C T
rs245777402
MGI SNP Detail		 Chr1:150871056 Gm29188 within coordinates of
Rr420196 269 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31126313
MGI SNP Detail		 Chr1:150871205 Gm29188 within coordinates of
Rr420196 418 bp distal
 SNP A/T T A T A A T A T T
rs246940916
MGI SNP Detail		 Chr1:150871267 Gm29188 within coordinates of
Rr420196 480 bp distal
 SNP C/T C T
rs246106433
MGI SNP Detail		 Chr1:150871315 Gm29188 within coordinates of
Rr420196 528 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C
rs213293786
MGI SNP Detail		 Chr1:150871355 Gm29188 within coordinates of
Rr420196 568 bp distal
 SNP C/G G C
rs228182385
MGI SNP Detail		 Chr1:150871371 Gm29188 within coordinates of
Rr420196 584 bp distal
 SNP C/G G C
rs256681502
MGI SNP Detail		 Chr1:150871396 Gm29188 within coordinates of
Rr420196 609 bp distal
 SNP A/G G A
rs214398929
MGI SNP Detail		 Chr1:150871417 Gm29188 within coordinates of
Rr420196 630 bp distal
 SNP C/T C T
rs237589630
MGI SNP Detail		 Chr1:150871453 Gm29188 within coordinates of
Rr420196 666 bp distal
 SNP A/C A C
rs255550199
MGI SNP Detail		 Chr1:150871468 Gm29188 within coordinates of
Rr420196 681 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs247099590
MGI SNP Detail		 Chr1:150871544 Gm29188 within coordinates of
Rr420196 757 bp distal
 SNP A/T T A
rs240169635
MGI SNP Detail		 Chr1:150871602 Gm29188 within coordinates of
Rr420196 815 bp distal
 SNP A/G A A A A G A A A G A A A A A A A A A A G A A G A A A A G A A A G A G A G A A A A G A A A A A A G A A A A A
rs259678324
MGI SNP Detail		 Chr1:150871621 Gm29188 within coordinates of
Rr420196 834 bp distal
 SNP A/C A A A A C A A A C A A A A A A A A A A C A A C A A A A C A A A C A C A C A A A A C A A A A A A C C A A A A
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Showing SNP(s) 1 - 100 of 130
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory