About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID
Rr420418
regulatory region 420418
MGI:7882550

<< first < prev1 next > last >>
Showing SNP(s) 1 - 64 of 64

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs243215075
MGI SNP Detail
Alliance Variant
Chr1:151963874 1700025G04Rik Intron
Rr420418 1992 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs254796705
MGI SNP Detail
Alliance Variant
Chr1:151963876 1700025G04Rik Intron
Rr420418 1990 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs223618376
MGI SNP Detail
Alliance Variant
Chr1:151963974 1700025G04Rik Intron
Rr420418 1892 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs249655012
MGI SNP Detail
Alliance Variant
Chr1:151963981 1700025G04Rik Intron
Rr420418 1885 bp proximal
SNP A/C C A
rs216879307
MGI SNP Detail
Alliance Variant
Chr1:151963991 1700025G04Rik Intron
Rr420418 1875 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs221437860
MGI SNP Detail
Alliance Variant
Chr1:151964014 1700025G04Rik Intron
Rr420418 1852 bp proximal
SNP A/T A T
rs257786641
MGI SNP Detail
Alliance Variant
Chr1:151964034 1700025G04Rik Intron
Rr420418 1832 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs245058663
MGI SNP Detail
Alliance Variant
Chr1:151964099 1700025G04Rik Intron
Rr420418 1767 bp proximal
SNP A/G A G
rs238726893
MGI SNP Detail
Alliance Variant
Chr1:151964162 1700025G04Rik Intron
Rr420418 1704 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs250890444
MGI SNP Detail
Alliance Variant
Chr1:151964179 1700025G04Rik Intron
Rr420418 1687 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T
rs212659145
MGI SNP Detail
Alliance Variant
Chr1:151964232 1700025G04Rik Intron
Rr420418 1634 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs264170050
MGI SNP Detail
Alliance Variant
Chr1:151964239 1700025G04Rik Intron
Rr420418 1627 bp proximal
SNP C/T T C
rs586381596
MGI SNP Detail
Alliance Variant
Chr1:151964291 1700025G04Rik Intron
Rr420417 within coordinates of
Rr420418 1575 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs6263952
MGI SNP Detail
Alliance Variant
Chr1:151964449 1700025G04Rik Intron
Rr420417 within coordinates of
Rr420418 1417 bp proximal
SNP C/G G C G C
rs579392146
MGI SNP Detail
Alliance Variant
Chr1:151964473 1700025G04Rik Intron
Rr420417 within coordinates of
Rr420418 1393 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs226096006
MGI SNP Detail
Alliance Variant
Chr1:151964608 1700025G04Rik Intron
Rr420417 within coordinates of
Rr420418 1258 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs246237916
MGI SNP Detail
Alliance Variant
Chr1:151964731 1700025G04Rik Intron
Rr420417 within coordinates of
Rr420418 1135 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs262903795
MGI SNP Detail
Alliance Variant
Chr1:151964761 1700025G04Rik Intron
Rr420417 within coordinates of
Rr420418 1105 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs223334595
MGI SNP Detail
Alliance Variant
Chr1:151964957 1700025G04Rik Intron
Rr420417 within coordinates of
Rr420418 909 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs237672323
MGI SNP Detail
Alliance Variant
Chr1:151965217 1700025G04Rik Intron
Rr420417 within coordinates of
Rr420418 649 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254659735
MGI SNP Detail
Alliance Variant
Chr1:151965234 1700025G04Rik Intron
Rr420417 within coordinates of
Rr420418 632 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs218117230
MGI SNP Detail
Alliance Variant
Chr1:151965429 1700025G04Rik Intron
Cpgi853 within coordinates of
Rr420417 within coordinates of
Rr420418 437 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C
rs241773193
MGI SNP Detail
Alliance Variant
Chr1:151965491 1700025G04Rik Intron
Cpgi853 within coordinates of
Rr420417 within coordinates of
Rr420418 375 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs264104362
MGI SNP Detail
Alliance Variant
Chr1:151965495 1700025G04Rik Intron
Cpgi853 within coordinates of
Rr420417 within coordinates of
Rr420418 371 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C
rs233481788
MGI SNP Detail
Alliance Variant
Chr1:151965566 1700025G04Rik Intron
Cpgi853 within coordinates of
Rr420417 within coordinates of
Rr420418 300 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs252534569
MGI SNP Detail
Alliance Variant
Chr1:151965570 1700025G04Rik Intron
Cpgi853 within coordinates of
Rr420417 within coordinates of
Rr420418 296 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs245252655
MGI SNP Detail
Alliance Variant
Chr1:151965587 1700025G04Rik Intron
Cpgi853 within coordinates of
Rr420417 within coordinates of
Rr420418 279 bp proximal
SNP C/G C G
rs230423135
MGI SNP Detail
Alliance Variant
Chr1:151965782 1700025G04Rik Intron
1700025G04Rik mRNA-UTR
Cpgi853 within coordinates of
Rr420417 within coordinates of
Rr420418 84 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs244708601
MGI SNP Detail
Alliance Variant
Chr1:151965829 1700025G04Rik Intron
1700025G04Rik mRNA-UTR
Cpgi853 within coordinates of
Rr420417 within coordinates of
Rr420418 37 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs212495614
MGI SNP Detail
Alliance Variant
Chr1:151965997 1700025G04Rik Intron
1700025G04Rik mRNA-UTR
Cpgi853 within coordinates of
Rr420418 within coordinates of
Tssr14209 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs229664422
MGI SNP Detail
Alliance Variant
Chr1:151966081 1700025G04Rik Intron
Cpgi853 within coordinates of
Rr420418 within coordinates of
Tssr14211 within coordinates of
SNP A/G G G G G A G G G A G G G G G G G G G G G G G G G G A A G A G A G A A A A G G G G G G G G A G G G G G
rs248607245
MGI SNP Detail
Alliance Variant
Chr1:151966232 1700025G04Rik Intron
Cpgi853 within coordinates of
Rr420418 within coordinates of
SNP A/G A A A G A A A G A A A A A A A A G A A G A A A A G G A G A G A G G G G A G A A A A A A G G A A G
rs582893168
MGI SNP Detail
Alliance Variant
Chr1:151966358 1700025G04Rik Intron
Cpgi853 within coordinates of
Rr420418 within coordinates of
SNP C/T T T T T C T T T C T T T T T T T T T C T T T T T T C T C T C T C C C T C T T T T T T C T T T T
rs585950782
MGI SNP Detail
Alliance Variant
Chr1:151966369 1700025G04Rik Intron
Cpgi853 within coordinates of
Rr420418 3 bp distal
SNP C/T C C C C T C C C T C C C C C C C C C C T C C C C T T C T C T C T T T T C T C C C C C C T C C C
rs580101088
MGI SNP Detail
Alliance Variant
Chr1:151966443 1700025G04Rik Intron
Cpgi853 within coordinates of
Rr420418 77 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A
rs217657116
MGI SNP Detail
Alliance Variant
Chr1:151966489 1700025G04Rik Intron
Cpgi853 within coordinates of
Rr420418 123 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs240896915
MGI SNP Detail
Alliance Variant
Chr1:151966587 1700025G04Rik Intron
Cpgi853 within coordinates of
Rr420418 221 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs258494140
MGI SNP Detail
Alliance Variant
Chr1:151966602 1700025G04Rik Intron
Cpgi853 within coordinates of
Rr420418 236 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs223131088
MGI SNP Detail
Alliance Variant
Chr1:151966624 1700025G04Rik Intron
Cpgi853 within coordinates of
Rr420418 258 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs261533603
MGI SNP Detail
Alliance Variant
Chr1:151966649 1700025G04Rik Intron
Cpgi853 within coordinates of
Rr420418 283 bp distal
SNP A/G A G
rs248893851
MGI SNP Detail
Alliance Variant
Chr1:151966658 1700025G04Rik Intron
Cpgi853 within coordinates of
Rr420418 292 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs218059151
MGI SNP Detail
Alliance Variant
Chr1:151966669 1700025G04Rik Intron
Cpgi853 within coordinates of
Rr420418 303 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs241616167
MGI SNP Detail
Alliance Variant
Chr1:151966851 1700025G04Rik mRNA-UTR
Cpgi853 within coordinates of
Rr420418 485 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265978294
MGI SNP Detail
Alliance Variant
Chr1:151966879 1700025G04Rik mRNA-UTR
Cpgi853 within coordinates of
Rr420418 513 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs226614015
MGI SNP Detail
Alliance Variant
Chr1:151967024 1700025G04Rik mRNA-UTR
Rr420418 658 bp distal
SNP A/G A G
rs238998529
MGI SNP Detail
Alliance Variant
Chr1:151967036 1700025G04Rik mRNA-UTR
Rr420418 670 bp distal
SNP A/T T A
rs262890447
MGI SNP Detail
Alliance Variant
Chr1:151967061 1700025G04Rik mRNA-UTR
Rr420418 695 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs226149030
MGI SNP Detail
Alliance Variant
Chr1:151967062 1700025G04Rik mRNA-UTR
Rr420418 696 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244655336
MGI SNP Detail
Alliance Variant
Chr1:151967506 1700025G04Rik mRNA-UTR
Rr420418 1140 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs256367711
MGI SNP Detail
Alliance Variant
Chr1:151967537 1700025G04Rik mRNA-UTR
Rr420418 1171 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs32068048
MGI SNP Detail
Alliance Variant
Chr1:151967559 1700025G04Rik mRNA-UTR
Rr420418 1193 bp distal
SNP C/G G G C C G
rs248447070
MGI SNP Detail
Alliance Variant
Chr1:151967597 1700025G04Rik mRNA-UTR
Rr420418 1231 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217848515
MGI SNP Detail
Alliance Variant
Chr1:151967598 1700025G04Rik mRNA-UTR
Rr420418 1232 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs227764533
MGI SNP Detail
Alliance Variant
Chr1:151967600 1700025G04Rik mRNA-UTR
Rr420418 1234 bp distal
SNP C/T C T
rs257103607
MGI SNP Detail
Alliance Variant
Chr1:151967680 1700025G04Rik mRNA-UTR
Rr420418 1314 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214676379
MGI SNP Detail
Alliance Variant
Chr1:151967727 1700025G04Rik mRNA-UTR
Rr420418 1361 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs231304071
MGI SNP Detail
Alliance Variant
Chr1:151967815 1700025G04Rik mRNA-UTR
Rr420418 1449 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs248924262
MGI SNP Detail
Alliance Variant
Chr1:151967877 1700025G04Rik mRNA-UTR
Rr420418 1511 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254929570
MGI SNP Detail
Alliance Variant
Chr1:151967900 1700025G04Rik mRNA-UTR
Rr420418 1534 bp distal
SNP A/G A G
rs235284262
MGI SNP Detail
Alliance Variant
Chr1:151967936 1700025G04Rik mRNA-UTR
Rr420418 1570 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs260302170
MGI SNP Detail
Chr1:151967961 Rr420418 1595 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs218455521
MGI SNP Detail
Chr1:151968096 Rr420418 1730 bp distal
SNP A/T T A
rs245419657
MGI SNP Detail
Chr1:151968224 Rr420418 1858 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262544706
MGI SNP Detail
Chr1:151968233 Rr420418 1867 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
<< first < prev1 next > last >>
Showing SNP(s) 1 - 64 of 64

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
03/25/2025
MGI 6.24
The Jackson Laboratory