Rr420465 Mouse SNP Summary

Mouse SNP Summary

Symbol
Name
ID

Rr420465
regulatory region 420465
MGI:7882597

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SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs50718124 MGI SNP Detail Alliance Variant	Chr1:152335559	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 1971 bp proximal	SNP	A/T				A	T
rs578766626 MGI SNP Detail Alliance Variant	Chr1:152335579	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 1951 bp proximal	SNP	C/T	C	C			T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T		T	T	T	T	T	T	T		C	C	T	T	T
rs581678513 MGI SNP Detail Alliance Variant	Chr1:152335580	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 1950 bp proximal	SNP	A/G	A	A			G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	A	G	G	G
rs52242423 MGI SNP Detail Alliance Variant	Chr1:152335603	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 1927 bp proximal	SNP	C/T				C	T
rs51152107 MGI SNP Detail Alliance Variant	Chr1:152335610	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 1920 bp proximal	SNP	A/T				T	A
rs45679170 MGI SNP Detail Alliance Variant	Chr1:152335611	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 1919 bp proximal	SNP	A/G				A	G
rs230125158 MGI SNP Detail Alliance Variant	Chr1:152335694	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 1836 bp proximal	SNP	A/G																																G																			A
rs233834125 MGI SNP Detail Alliance Variant	Chr1:152335700	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 1830 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A		A	A	A	A	A	A	A		A	A	A	A	A
rs252892230 MGI SNP Detail Alliance Variant	Chr1:152335722	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 1808 bp proximal	SNP	A/G	A	A			G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G		G	G	G	G	G	G		G	G	G	G	G	G	G		A	A	G	G	G
rs50874081 MGI SNP Detail Alliance Variant	Chr1:152335733	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 1797 bp proximal	SNP	C/T				C	T
rs50466975 MGI SNP Detail Alliance Variant	Chr1:152335773	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 1757 bp proximal	SNP	A/G				G	A
rs243658627 MGI SNP Detail Alliance Variant	Chr1:152335819	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 1711 bp proximal	SNP	A/T	A	A			A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A		A	A	A	A	A	A	A	A	T	A	A	A	A
rs212874397 MGI SNP Detail Alliance Variant	Chr1:152335820	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 1710 bp proximal	SNP	C/T	T	T			T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs229942875 MGI SNP Detail Alliance Variant	Chr1:152336007	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 1523 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs264273105 MGI SNP Detail Alliance Variant	Chr1:152336015	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 1515 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	A	A	A	G	G	G	G	G	G	G	G		A	G	G	G	G	G		G	A	A	A	G	G	A	G	A	G	A	G	G
rs31207716 MGI SNP Detail Alliance Variant	Chr1:152336033	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 1497 bp proximal	SNP	A/G					A	G		A		G			A													A	A			G		A			G		A				G		G								G				A
rs49272240 MGI SNP Detail Alliance Variant	Chr1:152336091	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 1439 bp proximal	SNP	C/T				T	C																					C						C																			T
rs48822405 MGI SNP Detail Alliance Variant	Chr1:152336101	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 1429 bp proximal	SNP	G/T				T	G																					G
rs51580319 MGI SNP Detail Alliance Variant	Chr1:152336118	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 1412 bp proximal	SNP	C/T				T	C																					C						C																			T
rs50535514 MGI SNP Detail Alliance Variant	Chr1:152336163	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 1367 bp proximal	SNP	C/G				G	C																					C						C																			G
rs257007954 MGI SNP Detail Alliance Variant	Chr1:152336196	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 1334 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C
rs213100796 MGI SNP Detail Alliance Variant	Chr1:152336221	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 1309 bp proximal	SNP	C/T																																C																			T
rs243097639 MGI SNP Detail Alliance Variant	Chr1:152336271	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 1259 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G		G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	A
rs46262669 MGI SNP Detail Alliance Variant	Chr1:152336286	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 1244 bp proximal	SNP	A/G				A	G																					G						G																			A
rs250521982 MGI SNP Detail Alliance Variant	Chr1:152336357	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 1173 bp proximal	SNP	A/G																																G																			A
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs258016012 MGI SNP Detail Alliance Variant	Chr1:152336375	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 1155 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs222646463 MGI SNP Detail Alliance Variant	Chr1:152336415	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 1115 bp proximal	SNP	C/T																																C																			T
rs585535273 MGI SNP Detail Alliance Variant	Chr1:152336440	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 1090 bp proximal	SNP	C/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G		G	G	G	G	G	G	G	G	C	G	G	G	G
rs31207715 MGI SNP Detail Alliance Variant	Chr1:152336456	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 1074 bp proximal	SNP	A/C					A	C		A		C			A								A					A	A			C		A			C		A				C		C								C				A
rs580305792 MGI SNP Detail Alliance Variant	Chr1:152336459	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 1071 bp proximal	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C		C	C	C	C	C	C	C	C	A	C	C	C	C
rs225858564 MGI SNP Detail Alliance Variant	Chr1:152336489	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 1041 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C	C	C	C	T	C	C		C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	T
rs243720310 MGI SNP Detail Alliance Variant	Chr1:152336507	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 1023 bp proximal	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	T	G	G	G	G	G	G	G	G	G	G	G	T	G	G		G	G	G	G	G	G		G	G	G	G	G	G	G	G	T	G	G	G	T
rs212736675 MGI SNP Detail Alliance Variant	Chr1:152336508	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 1022 bp proximal	SNP	A/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	A	T	T	T	T	T	T	T	T	T	T	T	A	T	T		T	T	T	T	T	T		T	T	T	T	T	T	T	T	A	T	T	T	A
rs586810156 MGI SNP Detail Alliance Variant	Chr1:152336547	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 983 bp proximal	SNP	C/G	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C		C	C	C	C	C	C	C	C	G	C	C	C	C
rs580115147 MGI SNP Detail Alliance Variant	Chr1:152336549	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 981 bp proximal	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C		C	C	C	C	C	C	C	C	A	C	C	C	C
rs583755427 MGI SNP Detail Alliance Variant	Chr1:152336552	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 978 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs31207714 MGI SNP Detail Alliance Variant	Chr1:152336597	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 933 bp proximal	SNP	A/G					A	G		A		G			A								G					A	A			G		A			G	G	A				G		G								G				G
rs254680939 MGI SNP Detail Alliance Variant	Chr1:152336614	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 916 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs49137686 MGI SNP Detail Alliance Variant	Chr1:152336648	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 882 bp proximal	SNP	A/G					G																					G						G				A															A
rs238753186 MGI SNP Detail Alliance Variant	Chr1:152336649	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 881 bp proximal	SNP	C/T	C	C	C		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	C	T	T		T	T	T	T	T	T		T	T	T	T	T	T	T	T	T	C	T	C	C
rs31206863 MGI SNP Detail Alliance Variant	Chr1:152336650	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 880 bp proximal	SNP	A/G					A			A					A													A						A				G							G								G
rs46400656 MGI SNP Detail Alliance Variant	Chr1:152336672	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 858 bp proximal	SNP	A/G					A																					A						A				G															G
rs231942156 MGI SNP Detail Alliance Variant	Chr1:152336673	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 857 bp proximal	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G		G	G	G	G	G	G	G	G	T	G	G	G	G
rs250757234 MGI SNP Detail Alliance Variant	Chr1:152336686	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 844 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs218386663 MGI SNP Detail Alliance Variant	Chr1:152336766	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 764 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G		G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	A
rs251927036 MGI SNP Detail Alliance Variant	Chr1:152336782	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 748 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C		C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	T	C
rs264208145 MGI SNP Detail Alliance Variant	Chr1:152336802	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 728 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs225595424 MGI SNP Detail Alliance Variant	Chr1:152336826	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 704 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs31206862 MGI SNP Detail Alliance Variant	Chr1:152336902	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 628 bp proximal	SNP	A/G					A	G		A		G			A													G	G			G		A			G	G	G				G		G								G
rs31206861 MGI SNP Detail Alliance Variant	Chr1:152336906	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 624 bp proximal	SNP	A/G					G	G		G		G			G														G			G					G						G		G												A
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs225895543 MGI SNP Detail Alliance Variant	Chr1:152336923	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 607 bp proximal	SNP	C/G	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C		C	C	C	C	C	C	C	C	G	C	C	C	C
rs31206860 MGI SNP Detail Alliance Variant	Chr1:152336986	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 544 bp proximal	SNP	C/T					T	C		T		C			T													T	T			C		T			C	C	T				C		C								C
rs254549530 MGI SNP Detail Alliance Variant	Chr1:152336997	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 533 bp proximal	SNP	A/T	A	A	A		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	A	T	T	T	T		T	T	T	T	T	T		T	T	T	T	T	T	T	T	T	A	T	A	T
rs585718076 MGI SNP Detail Alliance Variant	Chr1:152337016	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 514 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs223382705 MGI SNP Detail Alliance Variant	Chr1:152337066	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 464 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs259966187 MGI SNP Detail Alliance Variant	Chr1:152337121	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 409 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C		C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	T	C
rs217992081 MGI SNP Detail Alliance Variant	Chr1:152337143	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 387 bp proximal	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G		G	G	G	G	G	G	G	G	T	G	G	G	G
rs233021277 MGI SNP Detail Alliance Variant	Chr1:152337155	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 375 bp proximal	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G		G	G	G	G	G	G	G	G	T	G	G	G	G
rs31206859 MGI SNP Detail Alliance Variant	Chr1:152337158	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 372 bp proximal	SNP	C/T		T			T	C		T		C			T													T	T			C		T			C	C	T				C		C								C				T
rs214450470 MGI SNP Detail Alliance Variant	Chr1:152337172	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 358 bp proximal	SNP	A/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T		T	T	T	T	T	T	T	T	A	T	T	T	T
rs232036528 MGI SNP Detail Alliance Variant	Chr1:152337194	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 336 bp proximal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T	T	T	T	C	T	T		T	T	T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	C
rs250606027 MGI SNP Detail Alliance Variant	Chr1:152337195	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 335 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G		G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	A
rs31206858 MGI SNP Detail Alliance Variant	Chr1:152337223	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 307 bp proximal	SNP	A/G					G	A		G		A			G								G					G	G			A		G			A		G				A		A								A				G
rs240601404 MGI SNP Detail Alliance Variant	Chr1:152337260	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 270 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C
rs31206857 MGI SNP Detail Alliance Variant	Chr1:152337262	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 268 bp proximal	SNP	A/C					C	A		C		A			C													C	C			A		C			A		C				A		A								A				C
rs263178699 MGI SNP Detail Alliance Variant	Chr1:152337271	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 259 bp proximal	SNP	G/T																																G																			T
rs248353975 MGI SNP Detail Alliance Variant	Chr1:152337272	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 258 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C	C	C	C	T	C	C		C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C
rs250957508 MGI SNP Detail Alliance Variant	Chr1:152337279	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 251 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C
rs219769901 MGI SNP Detail Alliance Variant	Chr1:152337296	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 234 bp proximal	SNP	C/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	C	G	G	G	G	G	G	G	G	G	G	G	C	G	G		G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G
rs31206856 MGI SNP Detail Alliance Variant	Chr1:152337303	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 227 bp proximal	SNP	A/G					A			A		G			A													A	A					A					A				G		G								G				A
rs254436630 MGI SNP Detail Alliance Variant	Chr1:152337304	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 226 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs227816693 MGI SNP Detail Alliance Variant	Chr1:152337315	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 215 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	A	G	G		G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G
rs31206855 MGI SNP Detail Alliance Variant	Chr1:152337319	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 211 bp proximal	SNP	C/G		G			C	G		C		G			C			C										C	C			G		C											G								G
rs212784848 MGI SNP Detail Alliance Variant	Chr1:152337365	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 165 bp proximal	SNP	A/T																																A																			T
rs230110557 MGI SNP Detail Alliance Variant	Chr1:152337366	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 164 bp proximal	SNP	G/T																																T																			G
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs265884328 MGI SNP Detail Alliance Variant	Chr1:152337374	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 156 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G
rs579888447 MGI SNP Detail Alliance Variant	Chr1:152337379	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 151 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs232375798 MGI SNP Detail Alliance Variant	Chr1:152337387	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 143 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C
rs246427807 MGI SNP Detail Alliance Variant	Chr1:152337404	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 126 bp proximal	SNP	A/T	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A		A	A	A	A	A	A	A	A	T	A	A	A	A
rs31206854 MGI SNP Detail Alliance Variant	Chr1:152337424	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 106 bp proximal	SNP	A/C					A	C		A		C			A								A					A	A			C		A			C		A				C		C								C				A
rs31205893 MGI SNP Detail Alliance Variant	Chr1:152337438	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 92 bp proximal	SNP	A/C		C			C	A		C		A			C								C					C	C			A		C			A		C				A		A								A				C
rs244303098 MGI SNP Detail Alliance Variant	Chr1:152337556	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 within coordinates of	SNP	A/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	A	T	T		T	T	T	T	T	T		T	T	T	T	T	T	T	T	A	T	T	T
rs31205892 MGI SNP Detail Alliance Variant	Chr1:152337646	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 within coordinates of	SNP	C/G					G	C		G		C			G													G				C		G			C						C		C								C
rs243218122 MGI SNP Detail Alliance Variant	Chr1:152337667	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 within coordinates of	SNP	T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T
rs31205891 MGI SNP Detail Alliance Variant	Chr1:152337759	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 within coordinates of	SNP	G/T					G	G		G		T			G																	T		G			T						T		G								T				G
rs31205890 MGI SNP Detail Alliance Variant	Chr1:152337779	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 within coordinates of	SNP	C/T					T	C		T		C			T													T	T			C		T			C						C		C								C				T
rs238285554 MGI SNP Detail Alliance Variant	Chr1:152337808	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 within coordinates of	SNP	A/C	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	C	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A
rs31205889 MGI SNP Detail Alliance Variant	Chr1:152337885	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 within coordinates of	SNP	A/T					T	A		T		A			T													T	T			A		T			A						A		A								A				T
rs219652011 MGI SNP Detail Alliance Variant	Chr1:152337906	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 within coordinates of	SNP	A/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T		T	T	T	T	T	T	T	T	A	T	T	T	T
rs30756781 MGI SNP Detail Alliance Variant	Chr1:152337953	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 4 bp distal	SNP	A/G					G	A		G		A			G			G										A	A			A		G			A						A		A								A				G
rs248596600 MGI SNP Detail Alliance Variant	Chr1:152337954	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 5 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C
rs220127915 MGI SNP Detail Alliance Variant	Chr1:152337962	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 13 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C		C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	T
rs250895341 MGI SNP Detail Alliance Variant	Chr1:152337986	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 37 bp distal	SNP	G/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	G	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T
rs263975778 MGI SNP Detail Alliance Variant	Chr1:152338017	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 68 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs31205888 MGI SNP Detail Alliance Variant	Chr1:152338030	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 81 bp distal	SNP	A/C		A			C	A		C		A			C													C	C			A		C			A		C				A		A								A				C
rs240543803 MGI SNP Detail Alliance Variant	Chr1:152338063	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 114 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C
rs31205887 MGI SNP Detail Alliance Variant	Chr1:152338119	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 170 bp distal	SNP	A/G					G	A		G		A			G								G					G	G			A		G			A		G				A		A								A				G
rs225697481 MGI SNP Detail Alliance Variant	Chr1:152338153	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 204 bp distal	SNP	A/T	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	T	A	A		A	A	A	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	T
rs31205886 MGI SNP Detail Alliance Variant	Chr1:152338179	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 230 bp distal Rr420466 within coordinates of	SNP	A/G					G	A		G		A			G													G	G			A		G			A						A		A								A				G
rs264663859 MGI SNP Detail Alliance Variant	Chr1:152338191	Colgalt2 Intron Colgalt2 Noncoding-Transcript-Variant Rr420465 242 bp distal Rr420466 within coordinates of	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G

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Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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