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Mouse SNP Summary
Symbol
Name
ID
Rr420547
regulatory region 420547
MGI:7882679

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs255939060
MGI SNP Detail
Alliance Variant
Chr1:152681378 Ncf2 Intron
Rr420547 1896 bp proximal
SNP G/T T T T T T T T T T G T T T T T T T T T T T T T T T G T T T T T G T T T T T T T T T T T G T T G T T T G T T
rs229369324
MGI SNP Detail
Alliance Variant
Chr1:152681406 Ncf2 Intron
Rr420547 1868 bp proximal
SNP G/T T T T T T T T T T G T T T T T T T T T G T T T T T G T T T G T G T T T T T T T T T T T G T T G T G T G G
rs221077710
MGI SNP Detail
Alliance Variant
Chr1:152681441 Ncf2 Intron
Rr420547 1833 bp proximal
SNP A/G G A
rs31173309
MGI SNP Detail
Alliance Variant
Chr1:152681477 Ncf2 Intron
Rr420547 1797 bp proximal
SNP A/G A A G A G A A G G A G A G G G
rs260695834
MGI SNP Detail
Alliance Variant
Chr1:152681499 Ncf2 Intron
Rr420547 1775 bp proximal
SNP A/C C A
rs256380965
MGI SNP Detail
Alliance Variant
Chr1:152681505 Ncf2 Intron
Rr420547 1769 bp proximal
SNP C/T C C C C C C C T T C C C C C C C C C T C C T C C T C T T C T C T C T T T C C C T C C T C C T T
rs214251562
MGI SNP Detail
Alliance Variant
Chr1:152681573 Ncf2 Intron
Rr420547 1701 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G A A
rs581996227
MGI SNP Detail
Alliance Variant
Chr1:152681578 Ncf2 Intron
Rr420547 1696 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31173308
MGI SNP Detail
Alliance Variant
Chr1:152681606 Ncf2 Intron
Rr420547 1668 bp proximal
SNP C/T T T C T C T T C C T C T C C
rs31173307
MGI SNP Detail
Alliance Variant
Chr1:152681621 Ncf2 Intron
Rr420547 1653 bp proximal
SNP A/G G G G G G G G A G G G G G
rs249483417
MGI SNP Detail
Alliance Variant
Chr1:152681673 Ncf2 Intron
Rr420547 1601 bp proximal
SNP C/T C T
rs265357684
MGI SNP Detail
Alliance Variant
Chr1:152681694 Ncf2 Intron
Rr420547 1580 bp proximal
SNP A/G G A
rs234667344
MGI SNP Detail
Alliance Variant
Chr1:152681735 Ncf2 Intron
Rr420547 1539 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C A A
rs252418561
MGI SNP Detail
Alliance Variant
Chr1:152681752 Ncf2 Intron
Rr420547 1522 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31173306
MGI SNP Detail
Alliance Variant
Chr1:152681760 Ncf2 Intron
Rr420547 1514 bp proximal
SNP A/G G G A G A G G G A G A G A A A
rs237542134
MGI SNP Detail
Alliance Variant
Chr1:152681791 Ncf2 Intron
Rr420547 1483 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262295162
MGI SNP Detail
Alliance Variant
Chr1:152681811 Ncf2 Intron
Rr420547 1463 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T G G
rs243611038
MGI SNP Detail
Alliance Variant
Chr1:152681818 Ncf2 Intron
Rr420547 1456 bp proximal
SNP A/G G A
rs31173305
MGI SNP Detail
Alliance Variant
Chr1:152681821 Ncf2 Intron
Rr420547 1453 bp proximal
SNP A/G G G G G G G A G
rs215751925
MGI SNP Detail
Alliance Variant
Chr1:152681824 Ncf2 Intron
Rr420547 1450 bp proximal
SNP A/G G A
rs223327489
MGI SNP Detail
Alliance Variant
Chr1:152681867 Ncf2 Intron
Rr420547 1407 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs241883547
MGI SNP Detail
Alliance Variant
Chr1:152681871 Ncf2 Intron
Rr420547 1403 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260056838
MGI SNP Detail
Alliance Variant
Chr1:152681893 Ncf2 Intron
Rr420547 1381 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31173304
MGI SNP Detail
Alliance Variant
Chr1:152681896 Ncf2 Intron
Rr420547 1378 bp proximal
SNP A/G G A G A G A A A G G A A G
rs244210100
MGI SNP Detail
Alliance Variant
Chr1:152681904 Ncf2 Intron
Rr420547 1370 bp proximal
SNP G/T T T T T T T T T T G T T T T T T T T T T T T T T T G T T T T T G T T T T T T T T T T T G T T G T T T G T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs265099017
MGI SNP Detail
Alliance Variant
Chr1:152681947 Ncf2 Intron
Rr420547 1327 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs228888384
MGI SNP Detail
Alliance Variant
Chr1:152681987 Ncf2 Intron
Rr420547 1287 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs31172493
MGI SNP Detail
Alliance Variant
Chr1:152681994 Ncf2 Intron
Rr420547 1280 bp proximal
SNP A/G A A G A G A A G G A G
rs31172492
MGI SNP Detail
Alliance Variant
Chr1:152682008 Ncf2 Intron
Rr420547 1266 bp proximal
SNP C/T T T C T C T T C C T C
rs228711138
MGI SNP Detail
Alliance Variant
Chr1:152682023 Ncf2 Intron
Rr420547 1251 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G T T
rs247093103
MGI SNP Detail
Alliance Variant
Chr1:152682045 Ncf2 Intron
Rr420547 1229 bp proximal
SNP A/G G A
rs246264957
MGI SNP Detail
Alliance Variant
Chr1:152682048 Ncf2 Intron
Rr420547 1226 bp proximal
SNP A/G G G G G G G G G G A G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G A G G A G G G A G
rs215712161
MGI SNP Detail
Alliance Variant
Chr1:152682050 Ncf2 Intron
Rr420547 1224 bp proximal
SNP C/T T T T T T T T T T C T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T C T T C T T T C C
rs217575740
MGI SNP Detail
Alliance Variant
Chr1:152682067 Ncf2 Intron
Rr420547 1207 bp proximal
SNP A/T A T
rs257530084
MGI SNP Detail
Alliance Variant
Chr1:152682081 Ncf2 Intron
Rr420547 1193 bp proximal
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs213777474
MGI SNP Detail
Alliance Variant
Chr1:152682083 Ncf2 Intron
Rr420547 1191 bp proximal
SNP A/C C C C C A C C C A C C C C C C C C C C C C C A C C C C A A C C C C A C A A A A C A C C C C C C A C C C C C
rs235185839
MGI SNP Detail
Alliance Variant
Chr1:152682085 Ncf2 Intron
Rr420547 1189 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs237201333
MGI SNP Detail
Alliance Variant
Chr1:152682092 Ncf2 Intron
Rr420547 1182 bp proximal
SNP C/T T C
rs31172491
MGI SNP Detail
Alliance Variant
Chr1:152682105 Ncf2 Intron
Rr420547 1169 bp proximal
SNP A/T T T T T T A T T A
rs241873587
MGI SNP Detail
Alliance Variant
Chr1:152682238 Ncf2 Intron
Rr420547 1036 bp proximal
SNP C/G C C C C C C C C C G C C C C C C C C C G C C C C C G C C C C C G C C C C C C C C C C C G C C G C G C G C C
rs253535942
MGI SNP Detail
Alliance Variant
Chr1:152682252 Ncf2 Intron
Rr420547 1022 bp proximal
SNP C/T C C C C C C C C C T C C C C C C C C C T C C C C C T C C C C C T C C C C C C C C C C C T C C T C C C T C C
rs222991004
MGI SNP Detail
Alliance Variant
Chr1:152682277 Ncf2 Intron
Rr420547 997 bp proximal
SNP G/T G T
rs247114798
MGI SNP Detail
Alliance Variant
Chr1:152682299 Ncf2 Intron
Rr420547 975 bp proximal
SNP A/G G G G G G G G G G A G G G G G G G G G A G G G G G A G G G G G A G G G G G G G G G G G A G G A G G G A G G
rs231616800
MGI SNP Detail
Alliance Variant
Chr1:152682333 Ncf2 Intron
Rr420547 941 bp proximal
SNP A/C A C
rs229268064
MGI SNP Detail
Alliance Variant
Chr1:152682345 Ncf2 Intron
Rr420547 929 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs253499774
MGI SNP Detail
Alliance Variant
Chr1:152682362 Ncf2 Intron
Rr420547 912 bp proximal
SNP C/T C T
rs235957136
MGI SNP Detail
Alliance Variant
Chr1:152682404 Ncf2 Intron
Rr420547 870 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs260239292
MGI SNP Detail
Alliance Variant
Chr1:152682405 Ncf2 Intron
Rr420547 869 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs228889011
MGI SNP Detail
Alliance Variant
Chr1:152682412 Ncf2 Intron
Rr420547 862 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs246211178
MGI SNP Detail
Alliance Variant
Chr1:152682422 Ncf2 Intron
Rr420547 852 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs265586319
MGI SNP Detail
Alliance Variant
Chr1:152682433 Ncf2 Intron
Rr420547 841 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs231180230
MGI SNP Detail
Alliance Variant
Chr1:152682485 Ncf2 Intron
Rr420547 789 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs255962000
MGI SNP Detail
Alliance Variant
Chr1:152682487 Ncf2 Intron
Rr420547 787 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31172490
MGI SNP Detail
Alliance Variant
Chr1:152682528 Ncf2 Intron
Rr420547 746 bp proximal
SNP C/T T T T C T T T C T C T C C C
rs230264526
MGI SNP Detail
Alliance Variant
Chr1:152682532 Ncf2 Intron
Rr420547 742 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs243253235
MGI SNP Detail
Alliance Variant
Chr1:152682533 Ncf2 Intron
Rr420547 741 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs217384312
MGI SNP Detail
Alliance Variant
Chr1:152682534 Ncf2 Intron
Rr420547 740 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs235536930
MGI SNP Detail
Alliance Variant
Chr1:152682536 Ncf2 Intron
Rr420547 738 bp proximal
SNP A/T A A A A A A A A A T A A A A A A A A A A A A A A A T A A A A A T A A A A A A A A A A A T A A T A A A T A A
rs31172489
MGI SNP Detail
Alliance Variant
Chr1:152682547 Ncf2 Intron
Rr420547 727 bp proximal
SNP A/G G G A G A G G G G G A A
rs224011506
MGI SNP Detail
Alliance Variant
Chr1:152682554 Ncf2 Intron
Rr420547 720 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs31172488
MGI SNP Detail
Alliance Variant
Chr1:152682586 Ncf2 Intron
Rr420547 688 bp proximal
SNP C/T T T C T C T T C C T C T C C C
rs31172487
MGI SNP Detail
Alliance Variant
Chr1:152682630 Ncf2 Intron
Rr420547 644 bp proximal
SNP A/G A A A A A A A G A A A A A
rs585825541
MGI SNP Detail
Alliance Variant
Chr1:152682673 Ncf2 Intron
Rr420547 601 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs579536089
MGI SNP Detail
Alliance Variant
Chr1:152682713 Ncf2 Intron
Rr420547 561 bp proximal
SNP C/G G G G G G G G G G C G G G G G G G G G G G G G G C G G G G C G G G G G G G G G G C G G C G G C G
rs221886575
MGI SNP Detail
Alliance Variant
Chr1:152682744 Ncf2 Intron
Rr420547 530 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs235946655
MGI SNP Detail
Alliance Variant
Chr1:152682835 Ncf2 Intron
Rr420547 439 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs31172486
MGI SNP Detail
Alliance Variant
Chr1:152682963 Ncf2 Intron
Rr420547 311 bp proximal
SNP A/T A A T A T A A T T A T A T T T
rs222264137
MGI SNP Detail
Alliance Variant
Chr1:152682969 Ncf2 Intron
Rr420547 305 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs240378173
MGI SNP Detail
Alliance Variant
Chr1:152682994 Ncf2 Intron
Rr420547 280 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs263367175
MGI SNP Detail
Alliance Variant
Chr1:152682999 Ncf2 Intron
Rr420547 275 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs31172485
MGI SNP Detail
Alliance Variant
Chr1:152683005 Ncf2 Intron
Ncf2 Splice-Site
Rr420547 269 bp proximal
SNP C/T C C C C C C C T C C C C C
rs250987296
MGI SNP Detail
Alliance Variant
Chr1:152683023 Ncf2 mRNA-UTR
Rr420547 251 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs265009003
MGI SNP Detail
Alliance Variant
Chr1:152683055 Ncf2 mRNA-UTR
Rr420547 219 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224806886
MGI SNP Detail
Alliance Variant
Chr1:152683081 Ncf2 mRNA-UTR
Rr420547 193 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs243189561
MGI SNP Detail
Alliance Variant
Chr1:152683176 Ncf2 Intron
Ncf2 mRNA-UTR
Rr420547 98 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs31172484
MGI SNP Detail
Alliance Variant
Chr1:152683182 Ncf2 Intron
Ncf2 mRNA-UTR
Rr420547 92 bp proximal
SNP G/T T T T T T T T G T T T T T
rs235277867
MGI SNP Detail
Alliance Variant
Chr1:152683189 Ncf2 Intron
Ncf2 mRNA-UTR
Rr420547 85 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs258164453
MGI SNP Detail
Alliance Variant
Chr1:152683257 Ncf2 Intron
Ncf2 mRNA-UTR
Rr420547 17 bp proximal
SNP C/T T T T T T T T T T C T T T T T T T T T C T T T T T C T T T C T C T T T T T T T T T T T C T T C T C T C C C
rs215713288
MGI SNP Detail
Alliance Variant
Chr1:152683310 Ncf2 Intron
Ncf2 mRNA-UTR
Rr420547 within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs31180152
MGI SNP Detail
Alliance Variant
Chr1:152683382 Ncf2 Intron
Ncf2 mRNA-UTR
Rr420547 within coordinates of
SNP A/G G G G G G G G A G G G G G
rs257008557
MGI SNP Detail
Alliance Variant
Chr1:152683403 Ncf2 Intron
Ncf2 mRNA-UTR
Rr420547 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G A A
rs218801170
MGI SNP Detail
Alliance Variant
Chr1:152683410 Ncf2 Intron
Ncf2 mRNA-UTR
Rr420547 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230186062
MGI SNP Detail
Alliance Variant
Chr1:152683440 Ncf2 Intron
Ncf2 mRNA-UTR
Rr420547 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253360570
MGI SNP Detail
Alliance Variant
Chr1:152683460 Ncf2 Intron
Ncf2 mRNA-UTR
Rr420547 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs31180151
MGI SNP Detail
Alliance Variant
Chr1:152683607 Ncf2 mRNA-UTR
Ncf2 Splice-Site
Rr420547 within coordinates of
Tssr9425 within coordinates of
SNP C/T T T C T C T T C C C T C C
rs31180150
MGI SNP Detail
Alliance Variant
Chr1:152683651 Ncf2 mRNA-UTR
Rr420547 within coordinates of
SNP C/T C C T C T C C T T T C T T
rs49691055
MGI SNP Detail
Alliance Variant
Chr1:152683725 Ncf2 mRNA-UTR
Rr420547 74 bp distal
SNP A/G G A
rs47373647
MGI SNP Detail
Alliance Variant
Chr1:152683729 Ncf2 mRNA-UTR
Rr420547 78 bp distal
SNP A A
rs31180149
MGI SNP Detail
Alliance Variant
Chr1:152683851 Ncf2 Coding-NonSynonymous
Ncf2 Intron
Rr420547 200 bp distal
SNP G/T G G T G T G G T T G T T
rs265591505
MGI SNP Detail
Alliance Variant
Chr1:152683854 Ncf2 Coding-Synonymous
Ncf2 Intron
Rr420547 203 bp distal
SNP G/T T T T T G T T T G G T T T T T T T T T G T T G T T G T G G T G T G T G G G G T G T T G T T G G T T G G G
rs223849895
MGI SNP Detail
Alliance Variant
Chr1:152683874 Ncf2 Coding-NonSynonymous
Ncf2 Intron
Rr420547 223 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A C C A A A A A A A A A A
rs31180148
MGI SNP Detail
Alliance Variant
Chr1:152683926 Ncf2 Coding-Synonymous
Ncf2 Intron
Rr420547 275 bp distal
SNP C/T T T C T C T T C C T C T C C C
rs262099939
MGI SNP Detail
Alliance Variant
Chr1:152683991 Ncf2 Intron
Rr420547 340 bp distal
SNP C/T C C C C C C C C C T C C C C C C C C C T C C C C C T C C C T C T C C C C C C C C C C C T C C T C C C T T T
rs224747641
MGI SNP Detail
Alliance Variant
Chr1:152684015 Ncf2 Intron
Rr420547 364 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236933714
MGI SNP Detail
Alliance Variant
Chr1:152684020 Ncf2 Intron
Rr420547 369 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G A A
rs31180147
MGI SNP Detail
Alliance Variant
Chr1:152684100 Ncf2 Intron
Rr420547 449 bp distal
SNP C/T C C C C C C C T C C C C C
rs228344987
MGI SNP Detail
Alliance Variant
Chr1:152684102 Ncf2 Intron
Rr420547 451 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs252848065
MGI SNP Detail
Alliance Variant
Chr1:152684103 Ncf2 Intron
Rr420547 452 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs216142888
MGI SNP Detail
Alliance Variant
Chr1:152684138 Ncf2 Intron
Rr420547 487 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs262985994
MGI SNP Detail
Alliance Variant
Chr1:152684148 Ncf2 Intron
Rr420547 497 bp distal
SNP C/T T C
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Showing SNP(s) 1 - 100 of 177

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory

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