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Mouse SNP Summary
Symbol
Name
ID
Rr421480
regulatory region 421480
MGI:7883612

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Showing SNP(s) 1 - 78 of 78

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs239359426
MGI SNP Detail
Chr1:158523235 Rr421480 1978 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C
rs47856937
MGI SNP Detail
Chr1:158523244 Rr421480 1969 bp proximal
SNP A/C C C C C C C A C C C C C C C C
rs46230958
MGI SNP Detail
Chr1:158523312 Rr421480 1901 bp proximal
SNP G/T T T T T T T G T T T T T T T T
rs31694355
MGI SNP Detail
Chr1:158523326 Rr421480 1887 bp proximal
SNP A/T A A A A T A A A T T A A T A A T A
rs32654404
MGI SNP Detail
Chr1:158523391 Rr421480 1822 bp proximal
SNP C/T C C C C T C C C C T C C C C C C C
rs235244366
MGI SNP Detail
Chr1:158523416 Rr421480 1797 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs254294288
MGI SNP Detail
Chr1:158523529 Rr421480 1684 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32140396
MGI SNP Detail
Chr1:158523530 Rr421480 1683 bp proximal
SNP A/G G G G A G G G G A G G A G G A G
rs47226361
MGI SNP Detail
Chr1:158523534 Rr421480 1679 bp proximal
SNP C/T C C C C C C T C C C C C C C C
rs250538478
MGI SNP Detail
Chr1:158523569 Rr421480 1644 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs49102649
MGI SNP Detail
Chr1:158523622 Rr421480 1591 bp proximal
SNP A/G G G G G G G A G G G G G G G
rs230876153
MGI SNP Detail
Chr1:158523750 Rr421480 1463 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs260997209
MGI SNP Detail
Chr1:158523762 Rr421480 1451 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226575029
MGI SNP Detail
Chr1:158523887 Rr421480 1326 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32305056
MGI SNP Detail
Chr1:158523923 Rr421480 1290 bp proximal
SNP C/T C C T
rs259469133
MGI SNP Detail
Chr1:158523939 Rr421480 1274 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs220983374
MGI SNP Detail
Chr1:158523952 Rr421480 1261 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs239420637
MGI SNP Detail
Chr1:158523998 Rr421480 1215 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C
rs257223636
MGI SNP Detail
Chr1:158524025 Rr421480 1188 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs51452762
MGI SNP Detail
Chr1:158524250 Rr421480 963 bp proximal
SNP G/T G G G G G T G G G G G G G G
rs240917104
MGI SNP Detail
Chr1:158524262 Rr421480 951 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs266068086
MGI SNP Detail
Chr1:158524263 Rr421480 950 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs46694254
MGI SNP Detail
Chr1:158524365 Rr421480 848 bp proximal
SNP C/T T T T C T T C C T T C T T C T
rs47992728
MGI SNP Detail
Chr1:158524373 Rr421480 840 bp proximal
SNP C/T C T
rs50164016
MGI SNP Detail
Chr1:158524532 Rr421480 681 bp proximal
SNP G/T G G G G T G G G T G G T G G T G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs227166538
MGI SNP Detail
Chr1:158524571 Rr421480 642 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs244664020
MGI SNP Detail
Chr1:158524576 Rr421480 637 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs213727897
MGI SNP Detail
Chr1:158524757 Rr421480 456 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs45660903
MGI SNP Detail
Chr1:158524829 Rr421480 384 bp proximal
SNP C/T C C C C C C T C C C C C C C C
rs47581842
MGI SNP Detail
Chr1:158524845 Rr421480 368 bp proximal
SNP A/G G G G G G G A G G G G G G G G
rs219278459
MGI SNP Detail
Chr1:158524881 Rr421480 332 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs46026686
MGI SNP Detail
Chr1:158524916 Rr421480 297 bp proximal
SNP A/C C C C C C C A C C C C C C C C
rs48412419
MGI SNP Detail
Chr1:158524960 Rr421480 253 bp proximal
SNP C/T C C C C C C T C C C C C C C C
rs221037789
MGI SNP Detail
Chr1:158524994 Rr421480 219 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G
rs51325144
MGI SNP Detail
Chr1:158525043 Rr421480 170 bp proximal
SNP A/G G G G A G G G A G G A G G A G
rs251163120
MGI SNP Detail
Chr1:158525064 Rr421480 149 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs218589054
MGI SNP Detail
Chr1:158525145 Rr421480 68 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs243580988
MGI SNP Detail
Chr1:158525185 Rr421480 28 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G A G G G G G G G G G G G G G G G G A G G G G
rs264328606
MGI SNP Detail
Chr1:158525233 Rr421480 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs225917316
MGI SNP Detail
Chr1:158525319 Rr421480 85 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs247860788
MGI SNP Detail
Chr1:158525381 Rr421480 147 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs45862537
MGI SNP Detail
Chr1:158525401 Rr421480 167 bp distal
SNP C/T C C C C C C T C C C C C C C C
rs227045117
MGI SNP Detail
Chr1:158525463 Rr421480 229 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244903426
MGI SNP Detail
Chr1:158525464 Rr421480 230 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255776075
MGI SNP Detail
Chr1:158525579 Rr421480 345 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs50192957
MGI SNP Detail
Chr1:158525617 Rr421480 383 bp distal
SNP A/G G G G G G G A G G G G G G G G
rs252703015
MGI SNP Detail
Chr1:158525648 Rr421480 414 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs219522870
MGI SNP Detail
Chr1:158525654 Rr421480 420 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs49805133
MGI SNP Detail
Chr1:158525655 Rr421480 421 bp distal
SNP A/G G G G G G G A G G G G G G G G
rs47103630
MGI SNP Detail
Chr1:158525685 Rr421480 451 bp distal
SNP A/G A A A A A A G A A A A A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs50603464
MGI SNP Detail
Chr1:158525811 Rr421480 577 bp distal
SNP C/T C C C T C C C T C C T C C T C
rs232596497
MGI SNP Detail
Chr1:158525883 Rr421480 649 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs251214105
MGI SNP Detail
Chr1:158525911 Rr421480 677 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T C T T T T T T T T T T T T T T T T C T T T T
rs221012278
MGI SNP Detail
Chr1:158526041 Rr421480 807 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs49540342
MGI SNP Detail
Chr1:158526042 Rr421480 808 bp distal
SNP A/G G G G A G G G A G G A G G A G
rs264029147
MGI SNP Detail
Chr1:158526126 Rr421480 892 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C
rs225580451
MGI SNP Detail
Chr1:158526171 Rr421480 937 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs248663999
MGI SNP Detail
Chr1:158526173 Rr421480 939 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs256930777
MGI SNP Detail
Chr1:158526177 Rr421480 943 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs221021531
MGI SNP Detail
Chr1:158526215 Rr421480 981 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs51511730
MGI SNP Detail
Chr1:158526248 Rr421480 1014 bp distal
SNP C/T T T T T C T T C C T T C T T C T
rs255847750
MGI SNP Detail
Chr1:158526256 Rr421480 1022 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229663939
MGI SNP Detail
Chr1:158526274 Rr421480 1040 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs51623354
MGI SNP Detail
Chr1:158526337 Rr421480 1103 bp distal
SNP A/G G G G G A G G G A G G A G G A G
rs266159873
MGI SNP Detail
Chr1:158526354 Rr421480 1120 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs233149254
MGI SNP Detail
Chr1:158526377 Rr421480 1143 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247425898
MGI SNP Detail
Chr1:158526405 Rr421480 1171 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs215323014
MGI SNP Detail
Chr1:158526438 Rr421480 1204 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs226465158
MGI SNP Detail
Chr1:158526611 Rr421480 1377 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs244863573
MGI SNP Detail
Chr1:158526689 Rr421480 1455 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs212847791
MGI SNP Detail
Chr1:158526725 Rr421480 1491 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs236190749
MGI SNP Detail
Chr1:158526804 Rr421480 1570 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T C T T T T T T T T T T T T T T T T C T T T T
rs260831305
MGI SNP Detail
Chr1:158526811 Rr421480 1577 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs217722620
MGI SNP Detail
Chr1:158526937 Rr421480 1703 bp distal
Rr421481 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs233254923
MGI SNP Detail
Chr1:158526949 Rr421480 1715 bp distal
Rr421481 within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs251047963
MGI SNP Detail
Chr1:158527013 Rr421480 1779 bp distal
Rr421481 within coordinates of
SNP A/C C C C C C C A A C C C C C C C C A A A C C C A A A C A A C C C C A A C C C C C C A C C C A C C C C C C C C
rs32213230
MGI SNP Detail
Chr1:158527059 Gm53639 within coordinates of
Rr421480 1825 bp distal
Rr421481 within coordinates of
SNP C/T C C C T C C C T C C C C T C C C C C C
rs238699279
MGI SNP Detail
Chr1:158527182 Gm53639 within coordinates of
Rr421480 1948 bp distal
Rr421481 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
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Showing SNP(s) 1 - 78 of 78

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory

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