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Mouse SNP Summary
Symbol
Name
ID
Rr421574
regulatory region 421574
MGI:7883706

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Showing SNP(s) 1 - 73 of 73

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs245939790
MGI SNP Detail
Alliance Variant
Chr1:159680050 Rr421574 1876 bp proximal
Tnr Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G A A
rs49068458
MGI SNP Detail
Alliance Variant
Chr1:159680062 Rr421574 1864 bp proximal
Tnr Intron
SNP G G
rs51640999
MGI SNP Detail
Alliance Variant
Chr1:159680143 Rr421574 1783 bp proximal
Tnr Intron
SNP A A A
rs48459150
MGI SNP Detail
Alliance Variant
Chr1:159680145 Rr421574 1781 bp proximal
Tnr Intron
SNP A A A
rs31285913
MGI SNP Detail
Alliance Variant
Chr1:159680178 Rr421574 1748 bp proximal
Tnr Intron
SNP A/C C C C C C C C C C C C C C A C
rs31285912
MGI SNP Detail
Alliance Variant
Chr1:159680227 Rr421574 1699 bp proximal
Tnr Intron
SNP C/T T ? T C T T T C T T T T C
rs248703777
MGI SNP Detail
Alliance Variant
Chr1:159680254 Rr421574 1672 bp proximal
Tnr Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31285911
MGI SNP Detail
Alliance Variant
Chr1:159680300 Rr421574 1626 bp proximal
Tnr Intron
SNP C/G C C C C C C C C C C C C C C G
rs233087041
MGI SNP Detail
Alliance Variant
Chr1:159680355 Rr421574 1571 bp proximal
Tnr Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31285910
MGI SNP Detail
Alliance Variant
Chr1:159680381 Rr421574 1545 bp proximal
Tnr Intron
SNP A/T A A A T A A A T A A T A A T A
rs215242399
MGI SNP Detail
Alliance Variant
Chr1:159680383 Rr421574 1543 bp proximal
Tnr Intron
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs31285909
MGI SNP Detail
Alliance Variant
Chr1:159680400 Rr421574 1526 bp proximal
Tnr Intron
SNP C/T C C C C C C C C C C C C C C T
rs31285908
MGI SNP Detail
Alliance Variant
Chr1:159680415 Rr421574 1511 bp proximal
Tnr Intron
SNP A/C A A A C A A A C A A C A A A A
rs216873830
MGI SNP Detail
Alliance Variant
Chr1:159680432 Rr421574 1494 bp proximal
Tnr Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs235414316
MGI SNP Detail
Alliance Variant
Chr1:159680446 Rr421574 1480 bp proximal
Tnr Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs51247421
MGI SNP Detail
Alliance Variant
Chr1:159680451 Rr421574 1475 bp proximal
Tnr Intron
SNP T T
rs31285907
MGI SNP Detail
Alliance Variant
Chr1:159680469 Rr421574 1457 bp proximal
Tnr Intron
SNP C/T T T T C T T T C T T C T T C T
rs246420694
MGI SNP Detail
Alliance Variant
Chr1:159680470 Rr421574 1456 bp proximal
Tnr Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs50234027
MGI SNP Detail
Alliance Variant
Chr1:159680472 Rr421574 1454 bp proximal
Tnr Intron
SNP A A
rs31285906
MGI SNP Detail
Alliance Variant
Chr1:159680491 Rr421574 1435 bp proximal
Tnr Intron
SNP G/T T T T G T T T G T T T T G T
rs240839294
MGI SNP Detail
Alliance Variant
Chr1:159680547 Rr421574 1379 bp proximal
Tnr Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256561976
MGI SNP Detail
Alliance Variant
Chr1:159680582 Rr421574 1344 bp proximal
Tnr Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31285905
MGI SNP Detail
Alliance Variant
Chr1:159680603 Rr421574 1323 bp proximal
Tnr Intron
SNP C/T T T T C T T T C T T C T T C T
rs31285904
MGI SNP Detail
Alliance Variant
Chr1:159680936 Rr421574 990 bp proximal
Tnr Intron
SNP A/G A A A A G A A A G A A A A G A
rs48375202
MGI SNP Detail
Alliance Variant
Chr1:159680949 Rr421574 977 bp proximal
Tnr Intron
SNP A/G A A G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs31285133
MGI SNP Detail
Alliance Variant
Chr1:159681084 Rr421574 842 bp proximal
Tnr Intron
SNP A/G G G G G A G G G A G G A G G A G
rs31285132
MGI SNP Detail
Alliance Variant
Chr1:159681134 Rr421574 792 bp proximal
Tnr Intron
SNP A/T A A A A T A A A T A A T A A T A
rs214774674
MGI SNP Detail
Alliance Variant
Chr1:159681409 Rr421574 517 bp proximal
Tnr Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs31285131
MGI SNP Detail
Alliance Variant
Chr1:159681502 Rr421574 424 bp proximal
Tnr Intron
SNP A/C C C C A C C C C A C C C A
rs243185840
MGI SNP Detail
Alliance Variant
Chr1:159681556 Rr421574 370 bp proximal
Tnr Intron
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs50904736
MGI SNP Detail
Alliance Variant
Chr1:159681584 Rr421574 342 bp proximal
Tnr Intron
SNP C/T T T T T T T C C T T T T T T T T C C C T T T C C C T T C T C T C T C T T T T T T C T T T T T T T C T T C C
rs235354574
MGI SNP Detail
Alliance Variant
Chr1:159681590 Rr421574 336 bp proximal
Tnr Intron
SNP A/C A A A A A A C C A A A A A A A A C C C A A A C C C A A C A A A A A C A A A A A A C A A A A A A A C A A A A
rs251436353
MGI SNP Detail
Alliance Variant
Chr1:159681657 Rr421574 269 bp proximal
Tnr Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217507593
MGI SNP Detail
Alliance Variant
Chr1:159681710 Rr421574 216 bp proximal
Tnr Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236524499
MGI SNP Detail
Alliance Variant
Chr1:159681764 Rr421574 162 bp proximal
Tnr Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31285130
MGI SNP Detail
Alliance Variant
Chr1:159681777 Rr421574 149 bp proximal
Tnr Intron
SNP A/C C C C A C C C A C C A C C A C
rs220989114
MGI SNP Detail
Alliance Variant
Chr1:159681794 Rr421574 132 bp proximal
Tnr Intron
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs49356166
MGI SNP Detail
Alliance Variant
Chr1:159682088 Rr421574 within coordinates of
Tnr Intron
SNP C/T C T
rs31285129
MGI SNP Detail
Alliance Variant
Chr1:159682089 Rr421574 within coordinates of
Tnr Intron
SNP A/G G G A G A G G G G G G A A G G
rs222399642
MGI SNP Detail
Alliance Variant
Chr1:159682171 Rr421574 within coordinates of
Tnr Intron
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs46444183
MGI SNP Detail
Alliance Variant
Chr1:159682184 Rr421574 within coordinates of
Tnr Intron
SNP G/T G G T
rs263097991
MGI SNP Detail
Alliance Variant
Chr1:159682192 Rr421574 1 bp distal
Tnr Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225020038
MGI SNP Detail
Alliance Variant
Chr1:159682237 Rr421574 46 bp distal
Tnr Intron
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs31285128
MGI SNP Detail
Alliance Variant
Chr1:159682247 Rr421574 56 bp distal
Tnr Intron
SNP A/G A A A A G A A A G A A G G A A G A
rs31285127
MGI SNP Detail
Alliance Variant
Chr1:159682298 Rr421574 107 bp distal
Tnr Intron
SNP A/C C C C C C C C C C C C C C C A
rs31285126
MGI SNP Detail
Alliance Variant
Chr1:159682378 Rr421574 187 bp distal
Tnr Intron
SNP A/G G G G G A G G G A G G A A G G A G
rs31285125
MGI SNP Detail
Alliance Variant
Chr1:159682407 Rr421574 216 bp distal
Tnr Intron
SNP C/T C C C C T C C C T C C T T C C T C
rs45676247
MGI SNP Detail
Alliance Variant
Chr1:159682480 Rr421574 289 bp distal
Tnr Intron
SNP A/G A A G G
rs31285124
MGI SNP Detail
Alliance Variant
Chr1:159682497 Rr421574 306 bp distal
Tnr Intron
SNP C/T C C C T C C C T C C T C C T C
rs50744650
MGI SNP Detail
Alliance Variant
Chr1:159682547 Rr421574 356 bp distal
Tnr Intron
SNP A/G G G A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs31284593
MGI SNP Detail
Alliance Variant
Chr1:159682548 Rr421574 357 bp distal
Tnr Intron
SNP A/C A A A A A A A A A C A A C A
rs31284592
MGI SNP Detail
Alliance Variant
Chr1:159682558 Rr421574 367 bp distal
Tnr Intron
SNP C/T C C C C T C C C T C C T T C C T C
rs31284591
MGI SNP Detail
Alliance Variant
Chr1:159682582 Rr421574 391 bp distal
Tnr Intron
SNP G/T G G G G T G G G T G G T T G G T G
rs31284590
MGI SNP Detail
Alliance Variant
Chr1:159682817 Rr421574 626 bp distal
Tnr Intron
SNP G/T G G G G T G G G T G G T T G G T G
rs212669751
MGI SNP Detail
Alliance Variant
Chr1:159682967 Rr421574 776 bp distal
Tnr Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31284589
MGI SNP Detail
Alliance Variant
Chr1:159682994 Rr421574 803 bp distal
Tnr Intron
SNP A/G A A A A G A A A G A A G A A G G
rs45916131
MGI SNP Detail
Alliance Variant
Chr1:159683057 Rr421574 866 bp distal
Tnr Intron
SNP C/T C C T
rs31284588
MGI SNP Detail
Alliance Variant
Chr1:159683078 Rr421574 887 bp distal
Tnr Intron
SNP A/G G G G G A G G G A G G G G G G
rs31284587
MGI SNP Detail
Alliance Variant
Chr1:159683211 Rr421574 1020 bp distal
Tnr Intron
SNP G/T T T T G G G G G G T T G G G G G
rs262761359
MGI SNP Detail
Alliance Variant
Chr1:159683288 Rr421574 1097 bp distal
Tnr Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31284586
MGI SNP Detail
Alliance Variant
Chr1:159683318 Rr421574 1127 bp distal
Tnr Intron
SNP A/G G G G A G G G A G G A G G A G
rs245804698
MGI SNP Detail
Alliance Variant
Chr1:159683421 Rr421574 1230 bp distal
Tnr Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262719944
MGI SNP Detail
Alliance Variant
Chr1:159683495 Rr421574 1304 bp distal
Tnr Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs31284585
MGI SNP Detail
Alliance Variant
Chr1:159683688 Rr421574 1497 bp distal
Tnr Intron
SNP A/G G G G A G G G A G G A G G A G
rs236688452
MGI SNP Detail
Alliance Variant
Chr1:159683732 Rr421574 1541 bp distal
Tnr Intron
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs259046171
MGI SNP Detail
Alliance Variant
Chr1:159683746 Rr421574 1555 bp distal
Tnr Intron
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs229282009
MGI SNP Detail
Alliance Variant
Chr1:159683837 Rr421574 1646 bp distal
Tnr Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs252390939
MGI SNP Detail
Alliance Variant
Chr1:159683907 Rr421574 1716 bp distal
Tnr Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs578537116
MGI SNP Detail
Alliance Variant
Chr1:159684015 Rr421574 1824 bp distal
Tnr Intron
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs580164998
MGI SNP Detail
Alliance Variant
Chr1:159684027 Rr421574 1836 bp distal
Tnr Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs265757897
MGI SNP Detail
Alliance Variant
Chr1:159684063 Rr421574 1872 bp distal
Tnr Intron
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs230214932
MGI SNP Detail
Alliance Variant
Chr1:159684085 Rr421574 1894 bp distal
Tnr Intron
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs256549108
MGI SNP Detail
Alliance Variant
Chr1:159684095 Rr421574 1904 bp distal
Tnr Intron
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
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Showing SNP(s) 1 - 73 of 73

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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory