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Mouse SNP Summary
Symbol
Name
ID
Rr421675
regulatory region 421675
MGI:7883807

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs243591957
MGI SNP Detail
Alliance Variant
Chr1:160346369 Rabgap1l Intron
Rr421674 within coordinates of
Rr421675 1941 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs261849255
MGI SNP Detail
Alliance Variant
Chr1:160346411 Rabgap1l Intron
Rr421674 within coordinates of
Rr421675 1899 bp proximal
SNP A/T T T T T T T A A T T T T T T T T A A A T T T A A A T T A T T T T T A T T T T T T A T T T T T T T T T T T T
rs228104525
MGI SNP Detail
Alliance Variant
Chr1:160346650 Rabgap1l Intron
Rr421675 1660 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241444419
MGI SNP Detail
Alliance Variant
Chr1:160346752 Rabgap1l Intron
Rr421675 1558 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs31324630
MGI SNP Detail
Alliance Variant
Chr1:160346793 Rabgap1l Intron
Rr421675 1517 bp proximal
SNP A/G A A G A A A A A A A A A A A A A A
rs227567615
MGI SNP Detail
Alliance Variant
Chr1:160346832 Rabgap1l Intron
Rr421675 1478 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs243833009
MGI SNP Detail
Alliance Variant
Chr1:160346833 Rabgap1l Intron
Rr421675 1477 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs215095995
MGI SNP Detail
Alliance Variant
Chr1:160347006 Rabgap1l Intron
Rr421675 1304 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs227793809
MGI SNP Detail
Alliance Variant
Chr1:160347201 Rabgap1l Intron
Rr421675 1109 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs31324629
MGI SNP Detail
Alliance Variant
Chr1:160347202 Rabgap1l Intron
Rr421675 1108 bp proximal
SNP A/G G G G A G G G A G G G G A G
rs31324628
MGI SNP Detail
Alliance Variant
Chr1:160347287 Rabgap1l Intron
Rr421675 1023 bp proximal
SNP A/G A A A G A A A G A A G A A G A
rs236528095
MGI SNP Detail
Alliance Variant
Chr1:160347376 Rabgap1l Intron
Rr421675 934 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs253147382
MGI SNP Detail
Alliance Variant
Chr1:160347384 Rabgap1l Intron
Rr421675 926 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs31324627
MGI SNP Detail
Alliance Variant
Chr1:160347476 Rabgap1l Intron
Rr421675 834 bp proximal
SNP C/G C C C G C C C G G C G C G C G C C C G
rs31324626
MGI SNP Detail
Alliance Variant
Chr1:160347528 Rabgap1l Intron
Rr421675 782 bp proximal
SNP C/T C C C T C C C T C C T C C T C
rs31324625
MGI SNP Detail
Alliance Variant
Chr1:160347593 Rabgap1l Intron
Rr421675 717 bp proximal
SNP A/T A T A A A A A A A A A A A A A
rs32331431
MGI SNP Detail
Alliance Variant
Chr1:160347840 Rabgap1l Intron
Rr421675 470 bp proximal
SNP C/T T T C T C
rs32721208
MGI SNP Detail
Alliance Variant
Chr1:160347841 Rabgap1l Intron
Rr421675 469 bp proximal
SNP A/G G G A G A
rs13476205
MGI SNP Detail
Alliance Variant
Chr1:160347861 Rabgap1l Intron
Rr421675 449 bp proximal
SNP C/G C ? G C G C C C C C C G G G C C C G G G C C C G C C C G C G G C C C C G C G G C C G C C G C C C C
rs221821322
MGI SNP Detail
Alliance Variant
Chr1:160347959 Rabgap1l Intron
Rr421675 351 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs582500792
MGI SNP Detail
Alliance Variant
Chr1:160348012 Rabgap1l Intron
Rr421675 298 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs31324624
MGI SNP Detail
Alliance Variant
Chr1:160348017 Rabgap1l Intron
Rr421675 293 bp proximal
SNP A/G A A G A A A A A A A A A A A A A A
rs256950205
MGI SNP Detail
Alliance Variant
Chr1:160348072 Rabgap1l Intron
Rr421675 238 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs227484640
MGI SNP Detail
Alliance Variant
Chr1:160348079 Rabgap1l Intron
Rr421675 231 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs245805002
MGI SNP Detail
Alliance Variant
Chr1:160348111 Rabgap1l Intron
Rr421675 199 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs262788416
MGI SNP Detail
Alliance Variant
Chr1:160348120 Rabgap1l Intron
Rr421675 190 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs228061386
MGI SNP Detail
Alliance Variant
Chr1:160348166 Rabgap1l Intron
Rr421675 144 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs249978500
MGI SNP Detail
Alliance Variant
Chr1:160348258 Rabgap1l Intron
Rr421675 52 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs216723646
MGI SNP Detail
Alliance Variant
Chr1:160348282 Rabgap1l Intron
Rr421675 28 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31323833
MGI SNP Detail
Alliance Variant
Chr1:160348329 Rabgap1l Intron
Rr421675 within coordinates of
SNP C/T C C C C C C C C C C T C C C C
rs229403828
MGI SNP Detail
Alliance Variant
Chr1:160348343 Rabgap1l Intron
Rr421675 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246698373
MGI SNP Detail
Alliance Variant
Chr1:160348394 Rabgap1l Intron
Rr421675 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216062823
MGI SNP Detail
Alliance Variant
Chr1:160348405 Rabgap1l Intron
Rr421675 within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs232168279
MGI SNP Detail
Alliance Variant
Chr1:160348560 Rabgap1l Intron
Rr421675 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs256598301
MGI SNP Detail
Alliance Variant
Chr1:160348569 Rabgap1l Intron
Rr421675 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs212399317
MGI SNP Detail
Alliance Variant
Chr1:160348628 Rabgap1l Intron
Rr421675 20 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs31323832
MGI SNP Detail
Alliance Variant
Chr1:160348673 Rabgap1l Intron
Rr421675 65 bp distal
SNP C/T T C T C T T T T C T T C T T C T
rs255963589
MGI SNP Detail
Alliance Variant
Chr1:160348699 Rabgap1l Intron
Rr421675 91 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs31095209
MGI SNP Detail
Alliance Variant
Chr1:160348799 Rabgap1l Intron
Rr421675 191 bp distal
SNP C/T C T C C
rs251060168
MGI SNP Detail
Alliance Variant
Chr1:160348843 Rabgap1l Intron
Rr421675 235 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs221267388
MGI SNP Detail
Alliance Variant
Chr1:160348850 Rabgap1l Intron
Rr421675 242 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31323831
MGI SNP Detail
Alliance Variant
Chr1:160348863 Rabgap1l Intron
Rr421675 255 bp distal
SNP A/T T T A T T T T T T T T T T T T T T
rs265241902
MGI SNP Detail
Alliance Variant
Chr1:160348900 Rabgap1l Intron
Rr421675 292 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220402438
MGI SNP Detail
Alliance Variant
Chr1:160348942 Rabgap1l Intron
Rr421675 334 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs244968114
MGI SNP Detail
Alliance Variant
Chr1:160348943 Rabgap1l Intron
Rr421675 335 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs260596254
MGI SNP Detail
Alliance Variant
Chr1:160348955 Rabgap1l Intron
Rr421675 347 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs229323096
MGI SNP Detail
Alliance Variant
Chr1:160349030 Rabgap1l Intron
Rr421675 422 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs50852366
MGI SNP Detail
Alliance Variant
Chr1:160349042 Rabgap1l Intron
Rr421675 434 bp distal
SNP C C C
rs260140338
MGI SNP Detail
Alliance Variant
Chr1:160349059 Rabgap1l Intron
Rr421675 451 bp distal
SNP A/G A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs230369030
MGI SNP Detail
Alliance Variant
Chr1:160349198 Rabgap1l Intron
Rr421675 590 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs251783680
MGI SNP Detail
Alliance Variant
Chr1:160349248 Rabgap1l Intron
Rr421675 640 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs31323830
MGI SNP Detail
Alliance Variant
Chr1:160349543 Rabgap1l Intron
Rr421675 935 bp distal
SNP A/C C C C A C C C A C C A C C A C
rs235816312
MGI SNP Detail
Alliance Variant
Chr1:160349557 Rabgap1l Intron
Rr421675 949 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs31323829
MGI SNP Detail
Alliance Variant
Chr1:160349564 Rabgap1l Intron
Rr421675 956 bp distal
SNP C/G G G G C G G G C G G G G C G
rs31323828
MGI SNP Detail
Alliance Variant
Chr1:160349589 Rabgap1l Intron
Rr421675 981 bp distal
SNP C/G G G G C G G G C G G C G G C G
rs234899331
MGI SNP Detail
Alliance Variant
Chr1:160349610 Rabgap1l Intron
Rr421675 1002 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs584763308
MGI SNP Detail
Alliance Variant
Chr1:160349619 Rabgap1l Intron
Rr421675 1011 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs48881629
MGI SNP Detail
Alliance Variant
Chr1:160349706 Rabgap1l Intron
Rr421675 1098 bp distal
SNP A/G G A
rs31323827
MGI SNP Detail
Alliance Variant
Chr1:160349716 Rabgap1l Intron
Rr421675 1108 bp distal
SNP C/T C C C T C C C T C C C C T C
rs31323826
MGI SNP Detail
Alliance Variant
Chr1:160349746 Rabgap1l Intron
Rr421675 1138 bp distal
SNP C/T C T C T C C C T C C T C C T C
rs257763032
MGI SNP Detail
Alliance Variant
Chr1:160349752 Rabgap1l Intron
Rr421675 1144 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs31323825
MGI SNP Detail
Alliance Variant
Chr1:160349761 Rabgap1l Intron
Rr421675 1153 bp distal
SNP C/T C C C C C C C C C C C C T C C
rs242026493
MGI SNP Detail
Alliance Variant
Chr1:160349783 Rabgap1l Intron
Rr421675 1175 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs260646343
MGI SNP Detail
Alliance Variant
Chr1:160349914 Rabgap1l Intron
Rr421675 1306 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs223439818
MGI SNP Detail
Alliance Variant
Chr1:160349957 Rabgap1l Intron
Rr421675 1349 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs31323824
MGI SNP Detail
Alliance Variant
Chr1:160350095 Rabgap1l Intron
Rr421675 1487 bp distal
SNP C/T T C T C T T T C T T C T T C T
rs579411423
MGI SNP Detail
Alliance Variant
Chr1:160350197 Rabgap1l Intron
Rr421675 1589 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259955711
MGI SNP Detail
Alliance Variant
Chr1:160350239 Rabgap1l Intron
Rr421675 1631 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230219278
MGI SNP Detail
Alliance Variant
Chr1:160350358 Rabgap1l Intron
Rr421675 1750 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs256463235
MGI SNP Detail
Alliance Variant
Chr1:160350492 Rabgap1l Intron
Rr421675 1884 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31430331
MGI SNP Detail
Alliance Variant
Chr1:160350563 Rabgap1l Intron
Rr421675 1955 bp distal
SNP A/G G G G A
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Showing SNP(s) 1 - 71 of 71

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory