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Mouse SNP Summary
Symbol
Name
ID 		Rr422080
regulatory region 422080
MGI:7884212

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Showing SNP(s) 1 - 68 of 68

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs237845174
MGI SNP Detail		 Chr1:163183796 Rr422079 within coordinates of
Rr422080 1941 bp proximal
Rr846 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs31546135
MGI SNP Detail		 Chr1:163183810 Rr422079 within coordinates of
Rr422080 1927 bp proximal
Rr846 within coordinates of
 SNP A/G A A A G
rs31364594
MGI SNP Detail		 Chr1:163183898 Rr422079 within coordinates of
Rr422080 1839 bp proximal
Rr846 within coordinates of
 SNP A/G A A A A A A G A A A A A A A A
rs31363683
MGI SNP Detail		 Chr1:163183991 Rr422079 within coordinates of
Rr422080 1746 bp proximal
Rr846 within coordinates of
 SNP C/T C C C C C C C C T T C C T C C T C
rs31363682
MGI SNP Detail		 Chr1:163184033 Rr422079 within coordinates of
Rr422080 1704 bp proximal
Rr846 within coordinates of
 SNP A/G A A A A A A G A A A A A A A A
rs259237773
MGI SNP Detail		 Chr1:163184328 Rr422080 1409 bp proximal
Rr846 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A A A G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs235050274
MGI SNP Detail		 Chr1:163184335 Rr422080 1402 bp proximal
Rr846 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs31363681
MGI SNP Detail		 Chr1:163184537 Rr422080 1200 bp proximal
Rr846 within coordinates of
 SNP C/T T T T T T T C C T T C T T C T
rs265492835
MGI SNP Detail		 Chr1:163184557 Rr422080 1180 bp proximal
Rr846 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs232373799
MGI SNP Detail		 Chr1:163184673 Rr422080 1064 bp proximal
Rr846 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs244996298
MGI SNP Detail		 Chr1:163184784 Rr422080 953 bp proximal
Rr846 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31363680
MGI SNP Detail		 Chr1:163184833 Rr422080 904 bp proximal
Rr846 within coordinates of
 SNP C/T C C C C C C C C C C C C C T C
rs31363679
MGI SNP Detail		 Chr1:163184846 Rr422080 891 bp proximal
Rr846 within coordinates of
 SNP C/T C C C C C C C T C C T C C T C
rs244019787
MGI SNP Detail		 Chr1:163184866 Rr422080 871 bp proximal
Rr846 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs217753423
MGI SNP Detail		 Chr1:163184911 Rr422080 826 bp proximal
Rr846 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs242659954
MGI SNP Detail		 Chr1:163184931 Rr422080 806 bp proximal
Rr846 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs258361872
MGI SNP Detail		 Chr1:163184944 Rr422080 793 bp proximal
Rr846 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs217579257
MGI SNP Detail		 Chr1:163184945 Rr422080 792 bp proximal
Rr846 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs231728028
MGI SNP Detail		 Chr1:163184951 Rr422080 786 bp proximal
Rr846 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs250859372
MGI SNP Detail		 Chr1:163185061 Rr422080 676 bp proximal
Rr846 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs218167403
MGI SNP Detail		 Chr1:163185106 Rr422080 631 bp proximal
Rr846 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs31363678
MGI SNP Detail		 Chr1:163185107 Rr422080 630 bp proximal
Rr846 within coordinates of
 SNP A/G G G G G G G G G G A G G G G G G G
rs263844142
MGI SNP Detail		 Chr1:163185143 Rr422080 594 bp proximal
Rr846 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228978002
MGI SNP Detail		 Chr1:163185163 Rr422080 574 bp proximal
Rr846 within coordinates of
 SNP A/G A G
rs226958305
MGI SNP Detail		 Chr1:163185181 Rr422080 556 bp proximal
Rr846 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs31363677
MGI SNP Detail		 Chr1:163185295 Rr422080 442 bp proximal
Rr846 within coordinates of
 SNP A/C C C C C C C A C C C C C C C C
rs31363676
MGI SNP Detail		 Chr1:163185349 Rr422080 388 bp proximal
Rr846 within coordinates of
 SNP A/C A A A A A A C A A A A A A A A
rs31363675
MGI SNP Detail		 Chr1:163185374 Rr422080 363 bp proximal
Rr846 within coordinates of
 SNP A/G A A A A A A G G A A G A A G A
rs238791304
MGI SNP Detail		 Chr1:163185416 Rr422080 321 bp proximal
Rr846 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs31363674
MGI SNP Detail		 Chr1:163185419 Rr422080 318 bp proximal
Rr846 within coordinates of
 SNP A/G G G G G G G G G G A G G A G G A G
rs224104277
MGI SNP Detail		 Chr1:163185467 Rr422080 270 bp proximal
Rr846 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs244197811
MGI SNP Detail		 Chr1:163185500 Rr422080 237 bp proximal
Rr846 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265861192
MGI SNP Detail		 Chr1:163185583 Rr422080 154 bp proximal
Rr846 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A A
rs6377424
MGI SNP Detail		 Chr1:163185595 Rr422080 142 bp proximal
Rr846 within coordinates of
 SNP A/G A A A A A A A A A G G A A G A A G A
rs31362513
MGI SNP Detail		 Chr1:163185602 Rr422080 135 bp proximal
Rr846 within coordinates of
 SNP C/T C C C C C C T C C C C C C C C
rs216250086
MGI SNP Detail		 Chr1:163185874 Rr422080 within coordinates of
Rr846 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs31362512
MGI SNP Detail		 Chr1:163185918 Rr422080 within coordinates of
Rr846 within coordinates of
 SNP C/T T T T T T T C T T T T T T T T
rs246492039
MGI SNP Detail		 Chr1:163186058 Rr422080 within coordinates of
Rr846 within coordinates of
 SNP A/C A C
rs31362511
MGI SNP Detail		 Chr1:163186085 Rr422080 within coordinates of
Rr846 within coordinates of
 SNP C/T T T T T T T C T T T T T T T T
rs31362510
MGI SNP Detail		 Chr1:163186174 Rr422080 76 bp distal
Rr846 within coordinates of
 SNP A/T T T A T T T T T T T T T T
rs212498555
MGI SNP Detail		 Chr1:163186181 Rr422080 83 bp distal
Rr846 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs578611037
MGI SNP Detail		 Chr1:163186253 Rr422080 155 bp distal
Rr846 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs260503760
MGI SNP Detail		 Chr1:163186263 Rr422080 165 bp distal
Rr846 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A C A A C C C A A C A A A A A A A A A A A C A A A A A A A C A A C C
rs227525890
MGI SNP Detail		 Chr1:163186296 Rr422080 198 bp distal
Rr846 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs581393147
MGI SNP Detail		 Chr1:163186308 Rr422080 210 bp distal
Rr846 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs31362509
MGI SNP Detail		 Chr1:163186461 Rr422080 363 bp distal
Rr846 within coordinates of
 SNP C/T T T T T T T C C T T T T C T
rs31362508
MGI SNP Detail		 Chr1:163186613 Rr422080 515 bp distal
Rr846 within coordinates of
 SNP A/C C C C C C C A A C C A A C C A C A
rs219590088
MGI SNP Detail		 Chr1:163186617 Rr422080 519 bp distal
Rr846 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239836965
MGI SNP Detail		 Chr1:163186974 Rr422080 876 bp distal
Rr846 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs258303179
MGI SNP Detail		 Chr1:163187089 Rr422080 991 bp distal
Rr846 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs31362507
MGI SNP Detail		 Chr1:163187143 Rr422080 1045 bp distal
Rr846 within coordinates of
 SNP A/G A A A A A A G A A A A A A A A
rs585046133
MGI SNP Detail		 Chr1:163187199 Rr422080 1101 bp distal
Rr846 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs52603958
MGI SNP Detail		 Chr1:163187226 Rr422080 1128 bp distal
Rr846 within coordinates of
 SNP C/T C C T
rs52635835
MGI SNP Detail		 Chr1:163187227 Rr422080 1129 bp distal
Rr846 within coordinates of
 SNP A/G A A G
rs234859058
MGI SNP Detail		 Chr1:163187246 Rr422080 1148 bp distal
Rr846 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs252017915
MGI SNP Detail		 Chr1:163187295 Rr422080 1197 bp distal
Rr846 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs265656568
MGI SNP Detail		 Chr1:163187354 Rr422080 1256 bp distal
Rr846 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224927125
MGI SNP Detail		 Chr1:163187376 Rr422080 1278 bp distal
Rr846 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs31362506
MGI SNP Detail		 Chr1:163187415 Rr422080 1317 bp distal
Rr846 within coordinates of
 SNP C/T C C C C C C C C T C C T C C T C
rs223681079
MGI SNP Detail		 Chr1:163187428 Rr422080 1330 bp distal
Rr846 within coordinates of
 SNP C/T C T
rs212436699
MGI SNP Detail		 Chr1:163187490 Rr422080 1392 bp distal
Rr846 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs31362505
MGI SNP Detail		 Chr1:163187567 Rr422080 1469 bp distal
Rr846 within coordinates of
 SNP C/T C C C T C C C T C C C T C
rs259681437
MGI SNP Detail		 Chr1:163187719 Rr422080 1621 bp distal
Rr846 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs219545906
MGI SNP Detail		 Chr1:163187764 Rr422080 1666 bp distal
Rr846 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240318119
MGI SNP Detail		 Chr1:163187788 Rr422080 1690 bp distal
Rr846 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs31088541
MGI SNP Detail		 Chr1:163187857 Rr422080 1759 bp distal
 SNP C/T C C C C C C C C T C C T C C C C
rs219750014
MGI SNP Detail		 Chr1:163187974 Rr422080 1876 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs232925503
MGI SNP Detail		 Chr1:163188017 Rr422080 1919 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
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Showing SNP(s) 1 - 68 of 68
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory