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Mouse SNP Summary
Symbol
Name
ID 		Rr422218
regulatory region 422218
MGI:7884350

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs254493472
MGI SNP Detail
Alliance Variant		 Chr1:164284656 Atp1b1 Intron
Rr422218 1649 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs233940729
MGI SNP Detail
Alliance Variant		 Chr1:164284738 Atp1b1 Intron
Rr422218 1567 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs254674036
MGI SNP Detail
Alliance Variant		 Chr1:164285019 Atp1b1 Intron
Rr422218 1286 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs216177408
MGI SNP Detail
Alliance Variant		 Chr1:164285028 Atp1b1 Intron
Rr422218 1277 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs237956365
MGI SNP Detail
Alliance Variant		 Chr1:164285036 Atp1b1 Intron
Rr422218 1269 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs247272808
MGI SNP Detail
Alliance Variant		 Chr1:164285060 Atp1b1 Intron
Cpgi945 within coordinates of
Rr422218 1245 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C C C T C C T T T T T C T T T T T T C T T T T T T T T T T T C
rs213724540
MGI SNP Detail
Alliance Variant		 Chr1:164285211 Atp1b1 Intron
Cpgi945 within coordinates of
Rr422212 within coordinates of
Rr422218 1094 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233027027
MGI SNP Detail
Alliance Variant		 Chr1:164285273 Atp1b1 Intron
Cpgi945 within coordinates of
Rr422212 within coordinates of
Rr422218 1032 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T T T C T T C C C C C T C C C C C C T C C C C C C T C C C
rs249805971
MGI SNP Detail
Alliance Variant		 Chr1:164285304 Atp1b1 Intron
Cpgi945 within coordinates of
Rr422212 within coordinates of
Rr422218 1001 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G
rs47004200
MGI SNP Detail
Alliance Variant		 Chr1:164285802 Atp1b1 mRNA-UTR
Cpgi945 within coordinates of
Rr422213 within coordinates of
Rr422218 503 bp proximal
 SNP T T
rs46500225
MGI SNP Detail
Alliance Variant		 Chr1:164285806 Atp1b1 mRNA-UTR
Cpgi945 within coordinates of
Rr422213 within coordinates of
Rr422218 499 bp proximal
 SNP C C
rs47134641
MGI SNP Detail
Alliance Variant		 Chr1:164285831 Atp1b1 mRNA-UTR
Cpgi945 within coordinates of
Rr422213 within coordinates of
Rr422218 474 bp proximal
 SNP C/T C T
rs32115205
MGI SNP Detail		 Chr1:164286079 Cpgi945 within coordinates of
Gm70492 within coordinates of
Rr422215 within coordinates of
Rr422218 226 bp proximal
 SNP A/G A A G
rs240422398
MGI SNP Detail		 Chr1:164286095 Cpgi945 within coordinates of
Gm32391 within coordinates of
Gm70492 within coordinates of
Rr422217 within coordinates of
Rr422218 210 bp proximal
Tssr9788 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A T A A T T T A T T A A A A T A A A A A A T A A A A A A A A A A A A
rs255023669
MGI SNP Detail		 Chr1:164286167 Cpgi945 within coordinates of
Gm32391 within coordinates of
Gm70492 within coordinates of
Rr422217 within coordinates of
Rr422218 138 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C C C T C C T T T T C T T T T T T C T T T T T T C T T T T
rs219806167
MGI SNP Detail		 Chr1:164286168 Cpgi945 within coordinates of
Gm32391 within coordinates of
Gm70492 within coordinates of
Rr422217 within coordinates of
Rr422218 137 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A A A G A A G G G G A G G G G G G A G G G G G G G G G G G
rs235656758
MGI SNP Detail		 Chr1:164286267 Cpgi945 within coordinates of
Gm32391 within coordinates of
Gm70492 within coordinates of
Rr422217 within coordinates of
Rr422218 38 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T G T
rs254461411
MGI SNP Detail		 Chr1:164286298 Cpgi945 within coordinates of
Gm32391 within coordinates of
Gm70492 within coordinates of
Rr422217 within coordinates of
Rr422218 7 bp proximal
Tssr14748 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T C T T C C C T C C T T T T C T T T T T T C T T T T T T T T T T T
rs232984793
MGI SNP Detail		 Chr1:164286396 Cpgi945 within coordinates of
Gm32391 within coordinates of
Rr422218 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T T T G T T G G G G T G G G G G G T G G G G G G G G G G G
rs260086820
MGI SNP Detail		 Chr1:164286407 Cpgi945 within coordinates of
Gm32391 within coordinates of
Rr422218 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs263118966
MGI SNP Detail		 Chr1:164286575 Cpgi945 within coordinates of
Gm32391 within coordinates of
Rr422218 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs232999649
MGI SNP Detail		 Chr1:164286845 Gm32391 within coordinates of
Rr422218 40 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244998025
MGI SNP Detail		 Chr1:164286847 Gm32391 within coordinates of
Rr422218 42 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs46312749
MGI SNP Detail		 Chr1:164286878 Gm32391 within coordinates of
Rr422218 73 bp distal
 SNP A/C C C A
rs51715324
MGI SNP Detail		 Chr1:164286881 Gm32391 within coordinates of
Rr422218 76 bp distal
 SNP C/T T T C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs48387612
MGI SNP Detail		 Chr1:164286978 Gm32391 within coordinates of
Rr422218 173 bp distal
 SNP A/C/T C C C C C C C C C C C C C C C C C C T C C T A A C A A C C C C C A C C C C C C T C C C C C C C T C C C C
rs213519235
MGI SNP Detail		 Chr1:164286987 Gm32391 within coordinates of
Rr422218 182 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs239762022
MGI SNP Detail		 Chr1:164287082 Gm32391 within coordinates of
Rr422218 277 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264349405
MGI SNP Detail		 Chr1:164287320 Gm32391 within coordinates of
Gm70485 within coordinates of
Rr422218 515 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G G G A G G A A A A A G A A A A A A G A A A A A A A G A A A A
rs581774958
MGI SNP Detail		 Chr1:164287382 Gm32391 within coordinates of
Gm70485 within coordinates of
Rr422218 577 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224468458
MGI SNP Detail		 Chr1:164287473 Gm32391 within coordinates of
Gm70485 within coordinates of
Rr422218 668 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs233882632
MGI SNP Detail		 Chr1:164287507 Gm32391 within coordinates of
Gm70485 within coordinates of
Rr422218 702 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A A A A A A A A A A C A A A A A A A A A A A C
rs250098863
MGI SNP Detail		 Chr1:164287537 Gm32391 within coordinates of
Gm70485 within coordinates of
Rr422218 732 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C C C T C C T T T T T C T T T T T T C T T T T T T T C T T T T
rs219770055
MGI SNP Detail		 Chr1:164287542 Gm32391 within coordinates of
Gm70485 within coordinates of
Rr422218 737 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G G G A G G A A A A A G A A A A A A G A A A A A A A G A A A A
rs235622647
MGI SNP Detail		 Chr1:164287543 Gm32391 within coordinates of
Gm70485 within coordinates of
Rr422218 738 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G G G A G G A A A A A G A A A A A A G A A A A A A A A A A A A
rs50225196
MGI SNP Detail		 Chr1:164287591 Gm32391 within coordinates of
Gm70485 within coordinates of
Rr422218 786 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T T T A T T A A A A A T A A A A A A T A A A A A A A T A A A A
rs47459514
MGI SNP Detail		 Chr1:164287637 Gm32391 within coordinates of
Gm70485 within coordinates of
Rr422218 832 bp distal
 SNP C/T T T C
rs50174137
MGI SNP Detail		 Chr1:164287661 Gm32391 within coordinates of
Gm70485 within coordinates of
Rr422218 856 bp distal
 SNP A/T A A T
rs265462717
MGI SNP Detail		 Chr1:164287699 Gm32391 within coordinates of
Gm70485 within coordinates of
Rr422218 894 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs52359332
MGI SNP Detail		 Chr1:164287751 Gm32391 within coordinates of
Gm70485 within coordinates of
Rr422218 946 bp distal
 SNP C/T T T C
rs584005392
MGI SNP Detail		 Chr1:164287762 Gm32391 within coordinates of
Gm70485 within coordinates of
Rr422218 957 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G A G G G A
rs586330813
MGI SNP Detail		 Chr1:164287764 Gm32391 within coordinates of
Gm70485 within coordinates of
Rr422218 959 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs580774690
MGI SNP Detail		 Chr1:164287822 Gm32391 within coordinates of
Gm70485 within coordinates of
Rr422218 1017 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A
rs583944993
MGI SNP Detail		 Chr1:164287874 Gm32391 within coordinates of
Gm70485 within coordinates of
Rr422218 1069 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A G G A G G A A A A A G A A A A A A A A A A A A A A A A A A A
rs580977416
MGI SNP Detail		 Chr1:164287879 Gm32391 within coordinates of
Gm70485 within coordinates of
Rr422218 1074 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A G G A G G A A A A A G A A A A A A G A A A A A A A G A A A A
rs585052784
MGI SNP Detail		 Chr1:164287889 Gm32391 within coordinates of
Gm70485 within coordinates of
Rr422218 1084 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs30755382
MGI SNP Detail		 Chr1:164287903 Gm32391 within coordinates of
Gm70485 within coordinates of
Rr422218 1098 bp distal
 SNP C/T C C C C T
rs32368544
MGI SNP Detail		 Chr1:164287916 Gm32391 within coordinates of
Gm70485 within coordinates of
Rr422218 1111 bp distal
 SNP A/G G G G G A
rs30854269
MGI SNP Detail		 Chr1:164287948 Gm32391 within coordinates of
Gm70485 within coordinates of
Rr422218 1143 bp distal
 SNP A/G G G G G A
rs243630717
MGI SNP Detail		 Chr1:164287990 Gm32391 within coordinates of
Gm70485 within coordinates of
Rr422218 1185 bp distal
Rr422219 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs212913168
MGI SNP Detail		 Chr1:164288027 Gm32391 within coordinates of
Gm70485 within coordinates of
Rr422218 1222 bp distal
Rr422219 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs234230600
MGI SNP Detail		 Chr1:164288077 Gm32391 within coordinates of
Gm70485 within coordinates of
Rr422218 1272 bp distal
Rr422219 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254897142
MGI SNP Detail		 Chr1:164288079 Gm32391 within coordinates of
Gm70485 within coordinates of
Rr422218 1274 bp distal
Rr422219 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs216474002
MGI SNP Detail		 Chr1:164288086 Gm32391 within coordinates of
Gm70485 within coordinates of
Rr422218 1281 bp distal
Rr422219 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs31937799
MGI SNP Detail		 Chr1:164288130 Gm32391 within coordinates of
Gm70485 within coordinates of
Rr422218 1325 bp distal
Rr422219 within coordinates of
 SNP C/T T T T C
rs250057057
MGI SNP Detail		 Chr1:164288157 Gm32391 within coordinates of
Gm70485 within coordinates of
Rr422218 1352 bp distal
Rr422219 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs214824561
MGI SNP Detail		 Chr1:164288176 Gm32391 within coordinates of
Gm70485 within coordinates of
Rr422218 1371 bp distal
Rr422219 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs32686549
MGI SNP Detail		 Chr1:164288266 Gm32391 within coordinates of
Gm70485 within coordinates of
Rr422218 1461 bp distal
Rr422219 within coordinates of
 SNP C/T C C C T
rs261240316
MGI SNP Detail		 Chr1:164288299 Gm32391 within coordinates of
Gm70485 within coordinates of
Rr422218 1494 bp distal
Rr422219 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225459504
MGI SNP Detail		 Chr1:164288302 Gm32391 within coordinates of
Gm70485 within coordinates of
Rr422218 1497 bp distal
Rr422219 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs250865320
MGI SNP Detail		 Chr1:164288303 Gm32391 within coordinates of
Gm70485 within coordinates of
Rr422218 1498 bp distal
Rr422219 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs258459905
MGI SNP Detail		 Chr1:164288314 Gm32391 within coordinates of
Gm70485 within coordinates of
Rr422218 1509 bp distal
Rr422219 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs31796052
MGI SNP Detail		 Chr1:164288349 Gm32391 within coordinates of
Gm70485 within coordinates of
Rr422218 1544 bp distal
Rr422219 within coordinates of
 SNP A/T A A A A T
rs238777645
MGI SNP Detail		 Chr1:164288561 Gm32391 within coordinates of
Gm70485 within coordinates of
Rr422218 1756 bp distal
Rr422219 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs32050088
MGI SNP Detail		 Chr1:164288732 Gm32391 within coordinates of
Gm70485 within coordinates of
Rr422218 1927 bp distal
Rr422219 within coordinates of
 SNP A/G A A G
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Showing SNP(s) 1 - 65 of 65
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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MGI 6.24 		The Jackson Laboratory