Rr423405 Mouse SNP Summary

Mouse SNP Summary

Symbol
Name
ID

Rr423405
regulatory region 423405
MGI:7885537

<< first < prev1 next > last >>
Showing SNP(s) 1 - 32 of 32

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.

Show only selected strains with alleles Show all selected strains
Drag columns to re-order.

Column order is reset with Filter or Show option change.

Export:

SNPs to Text File

SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs31529723 MGI SNP Detail Alliance Variant	Chr1:171675241	Cd84 Intron Cd84 Noncoding-Transcript-Variant Rr423405 1692 bp proximal	SNP	A/C		A		A	A	A		A		C			A			C					C					A	A			A		A			C	A				A		A								A				A
rs31529722 MGI SNP Detail Alliance Variant	Chr1:171675423	Cd84 Intron Cd84 Noncoding-Transcript-Variant Rr423405 1510 bp proximal	SNP	A/G		G		G	G	G		G		A			G			A					G					G	G			G		G			A	G				G		G								G				G
rs30754114 MGI SNP Detail Alliance Variant	Chr1:171675432	Cd84 Intron Cd84 Noncoding-Transcript-Variant Rr423405 1501 bp proximal	SNP	G/T				G	G											T										G						G																		G
rs31515118 MGI SNP Detail Alliance Variant	Chr1:171675457	Cd84 Intron Cd84 Noncoding-Transcript-Variant Rr423405 1476 bp proximal	SNP	A/C		C		C	C	C		C		A			C			A					A					C	C			C		C			A	C				C		C								C				C
rs258585623 MGI SNP Detail Alliance Variant	Chr1:171675464	Cd84 Intron Cd84 Noncoding-Transcript-Variant Rr423405 1469 bp proximal	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	T	G	G	G	G
rs215981358 MGI SNP Detail Alliance Variant	Chr1:171675500	Cd84 Intron Cd84 Noncoding-Transcript-Variant Rr423405 1433 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs243261677 MGI SNP Detail Alliance Variant	Chr1:171675677	Cd84 Intron Cd84 Noncoding-Transcript-Variant Rr423405 1256 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs32646238 MGI SNP Detail Alliance Variant	Chr1:171675688	Cd84 Intron Cd84 Noncoding-Transcript-Variant Rr423405 1245 bp proximal	SNP	A/G				A	A											G										A						A																		A
rs31529721 MGI SNP Detail Alliance Variant	Chr1:171675893	Cd84 Intron Cd84 Noncoding-Transcript-Variant Rr423405 1040 bp proximal	SNP	C/T		T		T	T	T		T		C			T			C					C					T	T			T		T			C	T				T		T								T				T
rs31529720 MGI SNP Detail Alliance Variant	Chr1:171676054	Cd84 Intron Cd84 Noncoding-Transcript-Variant Rr423405 879 bp proximal	SNP	A/G		A		A	A	A		A		G			A			G					G					A	A			A		A			G	A				A		A								A				A
rs31529719 MGI SNP Detail Alliance Variant	Chr1:171676072	Cd84 Intron Cd84 Noncoding-Transcript-Variant Rr423405 861 bp proximal	SNP	A/T		A			A	A		A		A			A								A					A	A			T					A	A				T		A												A
rs31529718 MGI SNP Detail Alliance Variant	Chr1:171676172	Cd84 Intron Cd84 Noncoding-Transcript-Variant Rr423405 761 bp proximal	SNP	C/T		T			T	T		T		T			T								T					T	T			C					T	T				C		T												T
rs578455954 MGI SNP Detail Alliance Variant	Chr1:171676269	Cd84 Intron Cd84 Noncoding-Transcript-Variant Rr423405 664 bp proximal	SNP	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C		C	C	C	C
rs31529717 MGI SNP Detail Alliance Variant	Chr1:171676453	Cd84 Intron Cd84 Noncoding-Transcript-Variant Rr423404 within coordinates of Rr423405 480 bp proximal	SNP	C/T		T			T	T		T		C			T			C					C					T	T			T		T			C	T				T		T								T				T
rs31529716 MGI SNP Detail Alliance Variant	Chr1:171676889	Cd84 Intron Cd84 Noncoding-Transcript-Variant Rr423405 44 bp proximal	SNP	A/C		A		A	A	A		A		C			A			C					C					A	A			C		A				A						A								A				A
rs31499761 MGI SNP Detail Alliance Variant	Chr1:171677050	Cd84 Intron Cd84 Noncoding-Transcript-Variant Rr423405 within coordinates of	SNP	G/T		G		G	G	G		G		T			G			T					T					G	G			G		G			T	G				G		G								G				G
rs31529715 MGI SNP Detail Alliance Variant	Chr1:171677077	Cd84 Intron Cd84 Noncoding-Transcript-Variant Rr423405 within coordinates of	SNP	A/G		A			A	A		A		A			A								G					A	A			A					A	A				A		A												A
rs31529714 MGI SNP Detail Alliance Variant	Chr1:171677150	Cd84 Intron Cd84 Noncoding-Transcript-Variant Rr423405 within coordinates of	SNP	A/G		A		A	A	A		A		G			A			G					G					A	A			G		A			G	A				G		A								A				A
rs250942798 MGI SNP Detail Alliance Variant	Chr1:171677214	Cd84 Intron Cd84 Noncoding-Transcript-Variant Rr423405 within coordinates of	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs31528583 MGI SNP Detail Alliance Variant	Chr1:171677396	Cd84 Intron Cd84 Noncoding-Transcript-Variant Rr423405 within coordinates of Tssr10112 within coordinates of	SNP	C/G		C			C	C		C		C			C								G					C	C			C					C	C				C		C												C
rs224687405 MGI SNP Detail Alliance Variant	Chr1:171677528	Cd84 Intron Cd84 Noncoding-Transcript-Variant Rr423405 97 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs30600627 MGI SNP Detail Alliance Variant	Chr1:171677679	Cd84 Intron Cd84 Noncoding-Transcript-Variant Rr423405 248 bp distal	SNP	C/G		C			G	C		C		C			C			C					C					C	C			C		C			C							G								G
rs32430249 MGI SNP Detail Alliance Variant	Chr1:171677687	Cd84 Intron Cd84 Noncoding-Transcript-Variant Rr423405 256 bp distal	SNP	A/T		A			A											T										A						A																		A
rs31528582 MGI SNP Detail Alliance Variant	Chr1:171677692	Cd84 Intron Cd84 Noncoding-Transcript-Variant Rr423405 261 bp distal	SNP	G/T		T			T			T		G						G					T					T	T			T		T			G	T														T				T
rs31528581 MGI SNP Detail Alliance Variant	Chr1:171677909	Cd84 Intron Cd84 Noncoding-Transcript-Variant Rr423405 478 bp distal	SNP	C/T		C			C	C		C		C			C								C					C	C			T					C	C				T		C												C
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs31528580 MGI SNP Detail Alliance Variant	Chr1:171678081	Cd84 Intron Cd84 Noncoding-Transcript-Variant Rr423405 650 bp distal	SNP	C/T		C			C	C		C		C			C								T					C	C			C					C	C				C		C												C
rs31528579 MGI SNP Detail Alliance Variant	Chr1:171678107	Cd84 Intron Cd84 Noncoding-Transcript-Variant Rr423405 676 bp distal	SNP	C/G		C			C	C		C		C			C								G					C	C			C					C	C				C		C												C
rs31501203 MGI SNP Detail Alliance Variant	Chr1:171678499	Cd84 Intron Cd84 Noncoding-Transcript-Variant Rr423405 1068 bp distal	SNP	C/T		C		C	C	C		C		T			C			T					T					C	C			C		C			T	C				C		C								C				C
rs30768051 MGI SNP Detail Alliance Variant	Chr1:171678873	Cd84 Intron Cd84 Noncoding-Transcript-Variant Rr423405 1442 bp distal	SNP	A/G		G		G	G											A										G						G																		G
rs31528578 MGI SNP Detail Alliance Variant	Chr1:171678901	Cd84 Intron Cd84 Noncoding-Transcript-Variant Rr423405 1470 bp distal	SNP	A/T		A			A	A		A		A			A								T					A	A			A					A	A				A		A												A
rs230094518 MGI SNP Detail Alliance Variant	Chr1:171679072	Cd84 Intron Cd84 Noncoding-Transcript-Variant Rr423405 1641 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs31528577 MGI SNP Detail Alliance Variant	Chr1:171679402	Cd84 Coding-NonSynonymous Cd84 Intron Cd84 mRNA-UTR Cd84 Noncoding-Transcript-Variant Rr423405 1971 bp distal	SNP	A/G		A			A	A		A		G			A			G					A					A	A			A		A			G	A				A		A								A				A

<< first < prev1 next > last >>
Showing SNP(s) 1 - 32 of 32

Filter

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 07/22/2025 MGI 6.24