Rr423487 Mouse SNP Summary

Mouse SNP Summary

Symbol
Name
ID

Rr423487
regulatory region 423487
MGI:7885619

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Showing SNP(s) 1 - 100 of 121

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SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs245772896 MGI SNP Detail Alliance Variant	Chr1:172039126	Casq1 Intron Gm17224 within coordinates of Rr423487 1987 bp proximal	SNP	A/T	T	T	T		T	T	T	T	T	T	T	T	T		T	T	T		T	T	A	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	A	T	T	T	T
rs266250897 MGI SNP Detail Alliance Variant	Chr1:172039143	Casq1 Intron Gm17224 within coordinates of Rr423487 1970 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A		A	A					A	A	A	A	A	A	A		A	A		A	A	A		A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs233480680 MGI SNP Detail Alliance Variant	Chr1:172039148	Casq1 Intron Gm17224 within coordinates of Rr423487 1965 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C		C	C					C	C	C	C	C	C	C		C	C		C	C	C		C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs244578730 MGI SNP Detail Alliance Variant	Chr1:172039167	Casq1 Intron Gm17224 within coordinates of Rr423487 1946 bp proximal	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G		G	G	G		G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	T	G	G	G	G
rs108925272 MGI SNP Detail Alliance Variant	Chr1:172039172	Casq1 Intron Gm17224 within coordinates of Rr423487 1941 bp proximal	SNP	C/T																T										C						T																		C
rs226348967 MGI SNP Detail Alliance Variant	Chr1:172039173	Casq1 Intron Gm17224 within coordinates of Rr423487 1940 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A		A	A	A		A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs45688075 MGI SNP Detail Alliance Variant	Chr1:172039196	Casq1 Intron Gm17224 within coordinates of Rr423487 1917 bp proximal	SNP	A/G				G	G											A										G						G																		G
rs215777371 MGI SNP Detail Alliance Variant	Chr1:172039208	Casq1 Intron Gm17224 within coordinates of Rr423487 1905 bp proximal	SNP	A/C	C	C	C		C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	A	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	A	C	C	C	C
rs47781233 MGI SNP Detail Alliance Variant	Chr1:172039250	Casq1 Intron Gm17224 within coordinates of Rr423487 1863 bp proximal	SNP	A/T				A	A											T										A						A																		A
rs52028457 MGI SNP Detail Alliance Variant	Chr1:172039262	Casq1 Intron Gm17224 within coordinates of Rr423487 1851 bp proximal	SNP	A/G				G	G											A										G						G																		G
rs50972532 MGI SNP Detail Alliance Variant	Chr1:172039268	Casq1 Intron Gm17224 within coordinates of Rr423487 1845 bp proximal	SNP	A/G				A	A											G										A						A																		A
rs31568824 MGI SNP Detail Alliance Variant	Chr1:172039326	Casq1 Intron Gm17224 within coordinates of Rr423487 1787 bp proximal	SNP	C/T		T			T			T		C			T																	T					T	T						T
rs47475201 MGI SNP Detail Alliance Variant	Chr1:172039339	Casq1 Intron Gm17224 within coordinates of Rr423487 1774 bp proximal	SNP	C/T				T	T											C										T						T																		T
rs49137590 MGI SNP Detail Alliance Variant	Chr1:172039367	Casq1 Intron Gm17224 within coordinates of Rr423487 1746 bp proximal	SNP	A/G				G	G											A										G						G																		G
rs212199770 MGI SNP Detail Alliance Variant	Chr1:172039410	Casq1 Intron Gm17224 within coordinates of Rr423487 1703 bp proximal	SNP	G/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	G	T	T	T	T
rs232279885 MGI SNP Detail Alliance Variant	Chr1:172039411	Casq1 Intron Gm17224 within coordinates of Rr423487 1702 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs50135828 MGI SNP Detail Alliance Variant	Chr1:172039416	Casq1 Intron Gm17224 within coordinates of Rr423487 1697 bp proximal	SNP	C/T				C	C											T										C						C																		C
rs48980743 MGI SNP Detail Alliance Variant	Chr1:172039488	Casq1 Intron Gm17224 within coordinates of Rr423487 1625 bp proximal	SNP	A/G				A	A											G										A						A																		A
rs248214229 MGI SNP Detail Alliance Variant	Chr1:172039499	Casq1 Intron Gm17224 within coordinates of Rr423487 1614 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A
rs261108018 MGI SNP Detail Alliance Variant	Chr1:172039557	Casq1 Coding-Synonymous Gm17224 within coordinates of Rr423487 1556 bp proximal Tssr15175 within coordinates of	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs31567913 MGI SNP Detail Alliance Variant	Chr1:172039608	Casq1 Intron Gm17224 within coordinates of Rr423487 1505 bp proximal	SNP	A/G		G		G	G			G		A						A										G				G		G										G								G
rs238491776 MGI SNP Detail Alliance Variant	Chr1:172039610	Casq1 Intron Gm17224 within coordinates of Rr423487 1503 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs255719553 MGI SNP Detail Alliance Variant	Chr1:172039637	Casq1 Intron Gm17224 within coordinates of Rr423487 1476 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs32720838 MGI SNP Detail Alliance Variant	Chr1:172039754	Casq1 Intron Gm17224 within coordinates of Rr423487 1359 bp proximal	SNP	A/G				A	A											A										G
rs238605092 MGI SNP Detail Alliance Variant	Chr1:172039761	Casq1 Intron Gm17224 within coordinates of Rr423487 1352 bp proximal	SNP	A/T	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	T	A	A	A	A
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs259658225 MGI SNP Detail Alliance Variant	Chr1:172039763	Casq1 Intron Gm17224 within coordinates of Rr423487 1350 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs231460438 MGI SNP Detail Alliance Variant	Chr1:172039820	Casq1 Intron Gm17224 within coordinates of Rr423487 1293 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs259971952 MGI SNP Detail Alliance Variant	Chr1:172039848	Casq1 Intron Gm17224 within coordinates of Rr423487 1265 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs31492351 MGI SNP Detail Alliance Variant	Chr1:172039909	Casq1 Intron Gm17224 within coordinates of Rr423487 1204 bp proximal	SNP	A/C				C	C											A										C
rs32549203 MGI SNP Detail Alliance Variant	Chr1:172039911	Casq1 Intron Gm17224 within coordinates of Rr423487 1202 bp proximal	SNP	A/C				A	A											C										A
rs31750310 MGI SNP Detail Alliance Variant	Chr1:172039913	Casq1 Intron Gm17224 within coordinates of Rr423487 1200 bp proximal	SNP	A/G				A	A											G										A
rs584962800 MGI SNP Detail Alliance Variant	Chr1:172039919	Casq1 Intron Gm17224 within coordinates of Rr423487 1194 bp proximal	SNP	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C		C	C	C	C
rs578891701 MGI SNP Detail Alliance Variant	Chr1:172039920	Casq1 Intron Gm17224 within coordinates of Rr423487 1193 bp proximal	SNP	T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T		T	T	T	T
rs579325376 MGI SNP Detail Alliance Variant	Chr1:172039941	Casq1 Intron Gm17224 within coordinates of Rr423487 1172 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G		G	G	G	G
rs31935674 MGI SNP Detail Alliance Variant	Chr1:172039945	Casq1 Intron Gm17224 within coordinates of Rr423487 1168 bp proximal	SNP	A/G				G	G											A										G						A																		G
rs217839715 MGI SNP Detail Alliance Variant	Chr1:172040023	Casq1 Intron Gm17224 within coordinates of Rr423487 1090 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs229196763 MGI SNP Detail Alliance Variant	Chr1:172040069	Casq1 Intron Gm17224 within coordinates of Rr423487 1044 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs242324832 MGI SNP Detail Alliance Variant	Chr1:172040217	Casq1 Intron Gm17224 within coordinates of Rr423487 896 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs51035719 MGI SNP Detail Alliance Variant	Chr1:172040315	Casq1 Intron Gm17224 within coordinates of Rr423487 798 bp proximal	SNP	A/G				A												G										A						A																		A
rs232222196 MGI SNP Detail Alliance Variant	Chr1:172040359	Casq1 Intron Gm17224 within coordinates of Rr423487 754 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs32664169 MGI SNP Detail Alliance Variant	Chr1:172040417	Casq1 Intron Gm17224 within coordinates of Rr423487 696 bp proximal	SNP	C/T				C												C										T
rs582757738 MGI SNP Detail Alliance Variant	Chr1:172040431	Casq1 Intron Gm17224 within coordinates of Rr423487 682 bp proximal	SNP	A/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T		A	T	T	T	T
rs217334755 MGI SNP Detail Alliance Variant	Chr1:172040445	Casq1 Intron Gm17224 within coordinates of Rr423487 668 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A		G	A	A	A	A
rs238059650 MGI SNP Detail Alliance Variant	Chr1:172040467	Casq1 Intron Gm17224 within coordinates of Rr423487 646 bp proximal	SNP	C/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	C	G	G	G	G	G	G	G	G	G	C		G	G	G	G	G	G	G	G	C	G	G	C	G
rs264369574 MGI SNP Detail Alliance Variant	Chr1:172040598	Casq1 Coding-Synonymous Gm17224 within coordinates of Rr423487 515 bp proximal	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	A	C	C	C	C
rs226122493 MGI SNP Detail Alliance Variant	Chr1:172040691	Casq1 Coding-Synonymous Gm17224 within coordinates of Rr423487 422 bp proximal Tssr15177 within coordinates of	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs49317822 MGI SNP Detail Alliance Variant	Chr1:172040753	Casq1 Intron Gm17224 within coordinates of Rr423487 360 bp proximal	SNP	C/T					C											T										C						C																		C
rs250032981 MGI SNP Detail Alliance Variant	Chr1:172040783	Casq1 Intron Gm17224 within coordinates of Rr423487 330 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs220654958 MGI SNP Detail Alliance Variant	Chr1:172040794	Casq1 Intron Gm17224 within coordinates of Rr423487 319 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs238507701 MGI SNP Detail Alliance Variant	Chr1:172040795	Casq1 Intron Gm17224 within coordinates of Rr423487 318 bp proximal	SNP	G/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	G	T	T	T	T
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs263411287 MGI SNP Detail Alliance Variant	Chr1:172040842	Casq1 Intron Gm17224 within coordinates of Rr423487 271 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G		A	G	G	G	G
rs223844463 MGI SNP Detail Alliance Variant	Chr1:172040845	Casq1 Intron Gm17224 within coordinates of Rr423487 268 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	A		G	G	G	G	G	G	G		G	G	G	A	G
rs248164351 MGI SNP Detail Alliance Variant	Chr1:172040849	Casq1 Intron Gm17224 within coordinates of Rr423487 264 bp proximal	SNP	A/C	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A		C	A	A	A	A
rs265888633 MGI SNP Detail Alliance Variant	Chr1:172040850	Casq1 Intron Gm17224 within coordinates of Rr423487 263 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C	C	T		C	C	C	C	C	C	C		C	C	C	T	C
rs224258774 MGI SNP Detail Alliance Variant	Chr1:172040881	Casq1 Intron Gm17224 within coordinates of Rr423487 232 bp proximal	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	A	C	C	C	C	C	C	C	C	C	A		C	C	C	C	C	C	C	C	C	C	C	A	C
rs49288122 MGI SNP Detail Alliance Variant	Chr1:172040905	Casq1 Coding-Synonymous Casq1 Splice-Site Gm17224 within coordinates of Rr423487 208 bp proximal	SNP	A/G					A											G										A						A																		A
rs256246286 MGI SNP Detail Alliance Variant	Chr1:172040926	Casq1 Coding-Synonymous Gm17224 within coordinates of Rr423487 187 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	A		G	G	G	G	G	G	G	G	G	G	G	A	G
rs225276217 MGI SNP Detail Alliance Variant	Chr1:172040932	Casq1 Coding-Synonymous Gm17224 within coordinates of Rr423487 181 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A	A	G		A	A	A	A	A	A	A	A	A	A	A	G	A
rs586221513 MGI SNP Detail Alliance Variant	Chr1:172041038	Casq1 Intron Gm17224 within coordinates of Rr423487 75 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs31567912 MGI SNP Detail Alliance Variant	Chr1:172041091	Casq1 Intron Gm17224 within coordinates of Rr423487 22 bp proximal	SNP	C/T		C			C			C		C						C										T	C			C						C						C
rs216847880 MGI SNP Detail Alliance Variant	Chr1:172041092	Casq1 Intron Gm17224 within coordinates of Rr423487 21 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs240175036 MGI SNP Detail Alliance Variant	Chr1:172041165	Casq1 Intron Gm17224 within coordinates of Rr423487 within coordinates of	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs31567911 MGI SNP Detail Alliance Variant	Chr1:172041168	Casq1 Intron Gm17224 within coordinates of Rr423487 within coordinates of	SNP	A/G		A			A			A		G						G										A	A			A		A										A								A
rs218424179 MGI SNP Detail Alliance Variant	Chr1:172041209	Casq1 Intron Gm17224 within coordinates of Rr423487 within coordinates of	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C
rs230959851 MGI SNP Detail Alliance Variant	Chr1:172041264	Casq1 Intron Rr423487 within coordinates of	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs249917324 MGI SNP Detail Alliance Variant	Chr1:172041342	Casq1 Intron Rr423487 within coordinates of	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs220597138 MGI SNP Detail Alliance Variant	Chr1:172041364	Casq1 Intron Rr423487 within coordinates of	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs386883523 MGI SNP Detail Alliance Variant	Chr1:172041464	Casq1 Intron Rr423487 within coordinates of	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C		C	C	T	C	C
rs31567910 MGI SNP Detail Alliance Variant	Chr1:172041559	Casq1 Intron Rr423487 within coordinates of	SNP	C/T		T			C			T																						T		T										C								C
rs263162564 MGI SNP Detail Alliance Variant	Chr1:172041659	Casq1 Intron Rr423487 86 bp distal	SNP	A/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	T	A		T	T	T	T	T	T	T	T	T	T	T	A	T
rs223935269 MGI SNP Detail Alliance Variant	Chr1:172041666	Casq1 Intron Rr423487 93 bp distal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs250899438 MGI SNP Detail Alliance Variant	Chr1:172041669	Casq1 Intron Rr423487 96 bp distal	SNP	C/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	C	G	G	G	G
rs263921128 MGI SNP Detail Alliance Variant	Chr1:172041770	Casq1 Intron Rr423487 197 bp distal	SNP	G/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	G	T	T	T	T	T	T	T	T	T	G		T	T	T	T	T	T	T	T	T	T	T	G	T
rs31567908 MGI SNP Detail Alliance Variant	Chr1:172041823	Casq1 Intron Rr423487 250 bp distal	SNP	A/G		G		G	G			G		A						A										G	G					G										G								G
rs235739493 MGI SNP Detail Alliance Variant	Chr1:172041835	Casq1 Intron Rr423487 262 bp distal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs256173529 MGI SNP Detail Alliance Variant	Chr1:172041874	Casq1 Intron Rr423487 301 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs225264472 MGI SNP Detail Alliance Variant	Chr1:172041877	Casq1 Intron Rr423487 304 bp distal	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	A	C	C	C	C
rs253186167 MGI SNP Detail Alliance Variant	Chr1:172041966	Casq1 Intron Rr423487 393 bp distal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T		T	T	T	T	T
rs265729800 MGI SNP Detail Alliance Variant	Chr1:172041989	Casq1 Intron Rr423487 416 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	T		C	C	C	C	C	C	C		C	C	C	T	C
rs30946697 MGI SNP Detail Alliance Variant	Chr1:172041990	Casq1 Intron Rr423487 417 bp distal	SNP	A/G				A	A											G										A						A																		A
rs386924496 MGI SNP Detail Alliance Variant	Chr1:172042004	Casq1 Intron Rr423487 431 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C		C	C	T	C	C
rs31694366 MGI SNP Detail Alliance Variant	Chr1:172042008	Casq1 Intron Rr423487 435 bp distal	SNP	A/G				G	G											G										A
rs218236516 MGI SNP Detail Alliance Variant	Chr1:172042012	Casq1 Intron Rr423487 439 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G		G	G	G	G	G
rs31836615 MGI SNP Detail Alliance Variant	Chr1:172042032	Casq1 Intron Rr423487 459 bp distal	SNP	A/G				A	A											G										A						A																		A
rs243741825 MGI SNP Detail Alliance Variant	Chr1:172042084	Casq1 Intron Rr423487 511 bp distal	SNP	A/T	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	T	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A
rs214705812 MGI SNP Detail Alliance Variant	Chr1:172042137	Casq1 Intron Rr423487 564 bp distal	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	A	C	C	C	C
rs585400307 MGI SNP Detail Alliance Variant	Chr1:172042141	Casq1 Intron Rr423487 568 bp distal	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	A	C	C	C	C
rs30706647 MGI SNP Detail Alliance Variant	Chr1:172042158	Casq1 Intron Rr423487 585 bp distal	SNP	A/G				A	A											G										A						A																		A
rs232242718 MGI SNP Detail Alliance Variant	Chr1:172042170	Casq1 Intron Rr423487 597 bp distal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T
rs259872768 MGI SNP Detail Alliance Variant	Chr1:172042209	Casq1 Intron Rr423487 636 bp distal	SNP	C/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	C	G	G	G	G
rs215737646 MGI SNP Detail Alliance Variant	Chr1:172042253	Casq1 Intron Rr423487 680 bp distal	SNP	A/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	A	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T
rs239952727 MGI SNP Detail Alliance Variant	Chr1:172042311	Casq1 Intron Rr423487 738 bp distal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T
rs263633771 MGI SNP Detail Alliance Variant	Chr1:172042321	Casq1 Intron Rr423487 748 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	A		G	G	G	G	G	G	G	G	G	G	G	A	G
rs218425692 MGI SNP Detail Alliance Variant	Chr1:172042323	Casq1 Intron Rr423487 750 bp distal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	T	C		T	T	T	T	T	T	T	T	C	T	T	C	T
rs45695292 MGI SNP Detail Alliance Variant	Chr1:172042353	Casq1 Intron Rr423487 780 bp distal	SNP	A/C					C											A										C						C																		C
rs579701850 MGI SNP Detail Alliance Variant	Chr1:172042363	Casq1 Intron Rr423487 790 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs250359330 MGI SNP Detail Alliance Variant	Chr1:172042402	Casq1 Intron Rr423487 829 bp distal	SNP	A/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	A	T	T	T	T	T	T	T	T	T	A		T	T	T	T	T	T	T	T	T	T	T	A	T
rs219307490 MGI SNP Detail Alliance Variant	Chr1:172042467	Casq1 Intron Rr423487 894 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	A		G	G	G	G	G	G	G	G	G	G	G	A	G
rs248881207 MGI SNP Detail Alliance Variant	Chr1:172042479	Casq1 Intron Rr423487 906 bp distal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs263152391 MGI SNP Detail Alliance Variant	Chr1:172042532	Casq1 Intron Rr423487 959 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C	C	T		C	C	C	C	C	C	C	C	C	C	C	T	C

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Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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