Rr423588 Mouse SNP Summary

Mouse SNP Summary

Symbol
Name
ID

Rr423588
regulatory region 423588
MGI:7885720

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SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs31559820 MGI SNP Detail Alliance Variant	Chr1:172315321	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 1933 bp proximal	SNP	G/T		G			T					T											T					T	T			T					T					T		T												T
rs232708689 MGI SNP Detail Alliance Variant	Chr1:172315325	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 1929 bp proximal	SNP	C/T					C		C			C	C			C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C				C	C					C	C		C				C	C	C		T		C	C	C
rs252002464 MGI SNP Detail Alliance Variant	Chr1:172315414	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 1840 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs48221715 MGI SNP Detail Alliance Variant	Chr1:172315437	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 1817 bp proximal	SNP	A/C					C											A										C						C																		C
rs228437706 MGI SNP Detail Alliance Variant	Chr1:172315461	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 1793 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs244044759 MGI SNP Detail Alliance Variant	Chr1:172315488	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 1766 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs45864897 MGI SNP Detail Alliance Variant	Chr1:172315509	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 1745 bp proximal	SNP	C/T				T	T																					C						T																		T
rs584160115 MGI SNP Detail Alliance Variant	Chr1:172315513	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 1741 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs31559819 MGI SNP Detail Alliance Variant	Chr1:172315516	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 1738 bp proximal	SNP	C/G		C			C			C		C						G					G					C	C			C		C			G					C		G								C
rs586702791 MGI SNP Detail Alliance Variant	Chr1:172315518	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 1736 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs244989829 MGI SNP Detail Alliance Variant	Chr1:172315561	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 1693 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs31559818 MGI SNP Detail Alliance Variant	Chr1:172315576	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 1678 bp proximal	SNP	C/T		T		T	T	T		T		C			T								C					C	T			C		T			C	T				C		C								T				T
rs31559817 MGI SNP Detail Alliance Variant	Chr1:172315631	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 1623 bp proximal	SNP	A/G		G			G	G		G		G			G								G					G	G			G					G	G				G		A												G
rs31559816 MGI SNP Detail Alliance Variant	Chr1:172315664	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 1590 bp proximal	SNP	C/T		T		T	T	T		T		C			T								C					C	T			C		T			C	T				C		C								T				T
rs31559815 MGI SNP Detail Alliance Variant	Chr1:172315729	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 1525 bp proximal	SNP	G/T		G		G	G	G		G		T			G								T					T	G			T		G			T	G				T		T								G				G
rs31559814 MGI SNP Detail Alliance Variant	Chr1:172315824	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 1430 bp proximal	SNP	G/T		T		T	T	T		T		G			T								G					G	T			G		T			G	T				G		T								T				T
rs249036249 MGI SNP Detail Alliance Variant	Chr1:172315869	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 1385 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs31558953 MGI SNP Detail Alliance Variant	Chr1:172315938	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 1316 bp proximal	SNP	A/G		G		G	G	G		G		A			G								A					A	G			A		G			A	G				A		G								G				G
rs47638443 MGI SNP Detail Alliance Variant	Chr1:172315941	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 1313 bp proximal	SNP	G/T				G	G											G										T
rs265143086 MGI SNP Detail Alliance Variant	Chr1:172316040	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423587 within coordinates of Rr423588 1214 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs31558952 MGI SNP Detail Alliance Variant	Chr1:172316090	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423587 within coordinates of Rr423588 1164 bp proximal	SNP	A/G		G		G	G	G		G		A											A					A	G			A		G			A	G				A		G								G				G
rs248370465 MGI SNP Detail Alliance Variant	Chr1:172316120	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423587 within coordinates of Rr423588 1134 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs31558951 MGI SNP Detail Alliance Variant	Chr1:172316128	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423587 within coordinates of Rr423588 1126 bp proximal	SNP	C/T		C		C	C	C		C		T			C								T					T	C			T		C			T	C				T		C								C				C
rs46163767 MGI SNP Detail Alliance Variant	Chr1:172316219	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423587 within coordinates of Rr423588 1035 bp proximal	SNP	C/T																										T						C																		C
rs48808964 MGI SNP Detail Alliance Variant	Chr1:172316262	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423587 within coordinates of Rr423588 992 bp proximal	SNP	A/G																A										G						G																		G
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs51676113 MGI SNP Detail Alliance Variant	Chr1:172316308	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423587 within coordinates of Rr423588 946 bp proximal	SNP	A/C					A											A										C
rs255785315 MGI SNP Detail Alliance Variant	Chr1:172316314	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423587 within coordinates of Rr423588 940 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs48435772 MGI SNP Detail Alliance Variant	Chr1:172316315	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423587 within coordinates of Rr423588 939 bp proximal	SNP	A/G				G	G											A										G
rs250630424 MGI SNP Detail Alliance Variant	Chr1:172316399	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423587 within coordinates of Rr423588 855 bp proximal	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	T	G	G	G	G
rs46384080 MGI SNP Detail Alliance Variant	Chr1:172316402	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423587 within coordinates of Rr423588 852 bp proximal	SNP	C/T				T	T											C										T						T																		T
rs46141556 MGI SNP Detail Alliance Variant	Chr1:172316425	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423587 within coordinates of Rr423588 829 bp proximal	SNP	C/T				C	C											T										C						T																		C
rs30846716 MGI SNP Detail Alliance Variant	Chr1:172316431	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423587 within coordinates of Rr423588 823 bp proximal	SNP	A/G		A		A	A																					G
rs32298013 MGI SNP Detail Alliance Variant	Chr1:172316451	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423587 within coordinates of Rr423588 803 bp proximal	SNP	C/T		C		C	C																					T						C																		C
rs260119927 MGI SNP Detail Alliance Variant	Chr1:172316602	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423587 within coordinates of Rr423588 652 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs30612083 MGI SNP Detail Alliance Variant	Chr1:172316603	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423587 within coordinates of Rr423588 651 bp proximal	SNP	A/C		C		C	C	C		C		A			C			C					C					A	C			A					C	C				A		C												C
rs31558950 MGI SNP Detail Alliance Variant	Chr1:172316630	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423587 within coordinates of Rr423588 624 bp proximal	SNP	C/T		C		C	C	C		C		C			C			T					T					C	C			C		C			T	C				C		C								C				C
rs249073849 MGI SNP Detail Alliance Variant	Chr1:172316647	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423587 within coordinates of Rr423588 607 bp proximal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs580843428 MGI SNP Detail Alliance Variant	Chr1:172316673	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423587 within coordinates of Rr423588 581 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs218149784 MGI SNP Detail Alliance Variant	Chr1:172316679	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423587 within coordinates of Rr423588 575 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs232277617 MGI SNP Detail Alliance Variant	Chr1:172316714	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 540 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs257381999 MGI SNP Detail Alliance Variant	Chr1:172316730	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 524 bp proximal	SNP	G/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	G	T	T	T	T
rs47880591 MGI SNP Detail Alliance Variant	Chr1:172316810	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 444 bp proximal	SNP	A/G					A											G										A						A																		A
rs32329376 MGI SNP Detail Alliance Variant	Chr1:172316816	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 438 bp proximal	SNP	G/T				G	G											G										T
rs266234184 MGI SNP Detail Alliance Variant	Chr1:172316846	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 408 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs222353616 MGI SNP Detail Alliance Variant	Chr1:172316852	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 402 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs31558949 MGI SNP Detail Alliance Variant	Chr1:172316861	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 393 bp proximal	SNP	C/T		T		T	T	T		T		C			T								C					C	T			C		T			C	T				C		T								T
rs31558948 MGI SNP Detail Alliance Variant	Chr1:172316880	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 374 bp proximal	SNP	G/T		G			G			G		G						T					T					G	G			G		G			T					G		G								G
rs226389151 MGI SNP Detail Alliance Variant	Chr1:172316947	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 307 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs31558947 MGI SNP Detail Alliance Variant	Chr1:172316955	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 299 bp proximal	SNP	A/T		A			A	T		A		A			A								A					A	A			A					T	A				A		A												A
rs31875807 MGI SNP Detail Alliance Variant	Chr1:172316996	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 258 bp proximal	SNP	A/G				A	A											G										A						A																		A
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs254698075 MGI SNP Detail Alliance Variant	Chr1:172317019	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 235 bp proximal	SNP	A/G	A	A	A		A	G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	G	G	G	A	A	A	A	A	A	A	A	A
rs31558945 MGI SNP Detail Alliance Variant	Chr1:172317038	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 216 bp proximal	SNP	C/T		T		T	T	C		T		T			T			C					C					T	T			T		T			C	T				T		T								T				T
rs224327562 MGI SNP Detail Alliance Variant	Chr1:172317132	Igsf9 Coding-Synonymous Igsf9 mRNA-UTR Igsf9 Noncoding-Transcript-Variant Rr423588 122 bp proximal	SNP	A/G	G	G	G		G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	A	A	A	G	G	G	G	G	G	G	G	G
rs243178446 MGI SNP Detail Alliance Variant	Chr1:172317259	Igsf9 Intron Igsf9 mRNA-UTR Igsf9 Noncoding-Transcript-Variant Rr423588 within coordinates of	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C		T	C	C	C	C
rs31738990 MGI SNP Detail Alliance Variant	Chr1:172317260	Igsf9 Intron Igsf9 mRNA-UTR Igsf9 Noncoding-Transcript-Variant Rr423588 within coordinates of	SNP	A/G				G	G											A										G						G																		G
rs237202188 MGI SNP Detail Alliance Variant	Chr1:172317269	Igsf9 Intron Igsf9 mRNA-UTR Igsf9 Noncoding-Transcript-Variant Rr423588 within coordinates of	SNP	A/G	A	A	A		A	G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	G	G	G	A	A	A	A	A	A	A	A	A
rs262099101 MGI SNP Detail Alliance Variant	Chr1:172317270	Igsf9 Intron Igsf9 mRNA-UTR Igsf9 Noncoding-Transcript-Variant Rr423588 within coordinates of	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs32105765 MGI SNP Detail Alliance Variant	Chr1:172317278	Igsf9 Intron Igsf9 mRNA-UTR Igsf9 Noncoding-Transcript-Variant Rr423588 3 bp distal	SNP	A/G				A	A											G										A						A																		A
rs32223903 MGI SNP Detail Alliance Variant	Chr1:172317364	Igsf9 Intron Igsf9 mRNA-UTR Igsf9 Noncoding-Transcript-Variant Rr423588 89 bp distal	SNP	C/T					T											C										T						T																		T
rs30469913 MGI SNP Detail Alliance Variant	Chr1:172317388	Igsf9 Intron Igsf9 mRNA-UTR Igsf9 Noncoding-Transcript-Variant Rr423588 113 bp distal	SNP	A/G					G											A										G						G																		G
rs49697367 MGI SNP Detail Alliance Variant	Chr1:172317429	Igsf9 Intron Igsf9 mRNA-UTR Igsf9 Noncoding-Transcript-Variant Rr423588 154 bp distal	SNP	C/T					T											C										T						T																		T
rs49792967 MGI SNP Detail Alliance Variant	Chr1:172317435	Igsf9 Intron Igsf9 mRNA-UTR Igsf9 Noncoding-Transcript-Variant Rr423588 160 bp distal	SNP	C/T					T											C										T						T																		T
rs249316066 MGI SNP Detail Alliance Variant	Chr1:172317479	Igsf9 Intron Igsf9 mRNA-UTR Igsf9 Noncoding-Transcript-Variant Rr423588 204 bp distal	SNP	A/G	G	G	G		G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	A	A	A	G	G	G	G	G	G	G	G	G
rs31558944 MGI SNP Detail Alliance Variant	Chr1:172317504	Igsf9 Intron Igsf9 mRNA-UTR Igsf9 Noncoding-Transcript-Variant Rr423588 229 bp distal	SNP	A/G		A				G		A		A						G					G					A	A					A			G					A		A								A				A
rs242874467 MGI SNP Detail Alliance Variant	Chr1:172317516	Igsf9 Intron Igsf9 mRNA-UTR Igsf9 Noncoding-Transcript-Variant Rr423588 241 bp distal	SNP	C/T	T	T	T		T	C	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	C	C	C	T	T	T	T	T	T	T	T	T
rs31557973 MGI SNP Detail Alliance Variant	Chr1:172317517	Igsf9 Intron Igsf9 mRNA-UTR Igsf9 Noncoding-Transcript-Variant Rr423588 242 bp distal	SNP	C/T		T			T			T		T			T			C					C					T	T			T		T			C	T						T								T				T
rs231539948 MGI SNP Detail Alliance Variant	Chr1:172317560	Igsf9 Intron Igsf9 mRNA-UTR Igsf9 Noncoding-Transcript-Variant Rr423588 285 bp distal	SNP	A/G	A	A	A		A	G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	G	G	G	A	A	A	A	A	A	A	A	A
rs6328250 MGI SNP Detail Alliance Variant	Chr1:172317598	Igsf9 Intron Igsf9 mRNA-UTR Igsf9 Noncoding-Transcript-Variant Rr423588 323 bp distal	SNP	A/G																G								A
rs251176684 MGI SNP Detail Alliance Variant	Chr1:172317623	Igsf9 Intron Igsf9 mRNA-UTR Igsf9 Noncoding-Transcript-Variant Rr423588 348 bp distal	SNP	C/T	C	C	C		C	T	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	T	T	T	C	C	C	C	C	C	C	C	C
rs30592490 MGI SNP Detail Alliance Variant	Chr1:172317670	Igsf9 Intron Igsf9 mRNA-UTR Igsf9 Noncoding-Transcript-Variant Rr423588 395 bp distal	SNP	C/T		C			C											T										C						C																		C
rs224384516 MGI SNP Detail Alliance Variant	Chr1:172317674	Igsf9 Intron Igsf9 mRNA-UTR Igsf9 Noncoding-Transcript-Variant Rr423588 399 bp distal	SNP	C/G	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	G	C	C	G	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C
rs242268086 MGI SNP Detail Alliance Variant	Chr1:172317675	Igsf9 Intron Igsf9 mRNA-UTR Igsf9 Noncoding-Transcript-Variant Rr423588 400 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs32679502 MGI SNP Detail Alliance Variant	Chr1:172317676	Igsf9 Intron Igsf9 mRNA-UTR Igsf9 Noncoding-Transcript-Variant Rr423588 401 bp distal	SNP	G/T		G			G											T										G						G																		G
rs584215549 MGI SNP Detail Alliance Variant	Chr1:172317747	Igsf9 Intron Igsf9 mRNA-UTR Igsf9 Noncoding-Transcript-Variant Rr423588 472 bp distal	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	T	G	G	G	G
rs231225878 MGI SNP Detail Alliance Variant	Chr1:172317790	Igsf9 Intron Igsf9 mRNA-UTR Igsf9 Noncoding-Transcript-Variant Rr423588 515 bp distal	SNP	C/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	C	G	G	G	G
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs31557972 MGI SNP Detail Alliance Variant	Chr1:172317792	Igsf9 Intron Igsf9 mRNA-UTR Igsf9 Noncoding-Transcript-Variant Rr423588 517 bp distal	SNP	C/T		C			C	T		C		C			C			T					T					C	C			C		C			T	C				C		C								C				C
rs217331995 MGI SNP Detail Alliance Variant	Chr1:172317797	Igsf9 Intron Igsf9 mRNA-UTR Igsf9 Noncoding-Transcript-Variant Rr423588 522 bp distal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs238054808 MGI SNP Detail Alliance Variant	Chr1:172317807	Igsf9 Intron Igsf9 mRNA-UTR Igsf9 Noncoding-Transcript-Variant Rr423588 532 bp distal	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	T	G	G	G	G
rs255565681 MGI SNP Detail Alliance Variant	Chr1:172317857	Igsf9 Coding-Synonymous Igsf9 Noncoding-Transcript-Variant Igsf9 Splice-Site Rr423588 582 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs3706616 MGI SNP Detail Alliance Variant	Chr1:172317899	Igsf9 Coding-Synonymous Igsf9 Noncoding-Transcript-Variant Rr423588 624 bp distal	SNP	C/G		G			G	G		G		G			G			C					C					G	G			G		G			C	G				G		G								G				G
rs231173991 MGI SNP Detail Alliance Variant	Chr1:172317924	Igsf9 Coding-NonSynonymous Igsf9 Noncoding-Transcript-Variant Rr423588 649 bp distal	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	A	C	C	C	C
rs249975009 MGI SNP Detail Alliance Variant	Chr1:172318121	Cpgi1051 within coordinates of Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 846 bp distal	SNP	C/G	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	G	C	C	C	C
rs223031078 MGI SNP Detail Alliance Variant	Chr1:172318182	Cpgi1051 within coordinates of Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 907 bp distal	SNP	C/T	C	C	C		T	T	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	T	T	T	C	T	C	C	C	C	C	C	C
rs3707910 MGI SNP Detail Alliance Variant	Chr1:172318189	Cpgi1051 within coordinates of Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 914 bp distal	SNP	A/G		A		A	A			A		A			A			G					G					A	A			A		A			G	A				A		A								A				A
rs259093091 MGI SNP Detail Alliance Variant	Chr1:172318210	Cpgi1051 within coordinates of Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 935 bp distal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs51765677 MGI SNP Detail Alliance Variant	Chr1:172318408	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 1133 bp distal	SNP	A/G				G	G											A										G						G																		G
rs586962217 MGI SNP Detail Alliance Variant	Chr1:172318565	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 1290 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs581093031 MGI SNP Detail Alliance Variant	Chr1:172318612	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 1337 bp distal	SNP	A/C	A	A			C	C	C	A	A	A	A		A	C	C	C	C	C	C	A	C	C	A	C	C		A	A	C	A		A	A	C	C	A	A	A	A	A	A		C	C	C	C	C	C	A			A	A	A	C
rs46831854 MGI SNP Detail Alliance Variant	Chr1:172318646	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 1371 bp distal	SNP	C/T					C											T										C						T																		C
rs258877501 MGI SNP Detail Alliance Variant	Chr1:172318788	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 1513 bp distal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs31557971 MGI SNP Detail Alliance Variant	Chr1:172318915	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 1640 bp distal	SNP	C/G		C		C	G	G		C		C			C								C					C	C			C					C	C				C		C												C
rs47908008 MGI SNP Detail Alliance Variant	Chr1:172318945	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 1670 bp distal	SNP	A/T				A	T																					A
rs49994892 MGI SNP Detail Alliance Variant	Chr1:172318960	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 1685 bp distal	SNP	A/G				G	A																					G
rs31557970 MGI SNP Detail Alliance Variant	Chr1:172318986	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 1711 bp distal	SNP	A/T		A		A	A	A		A		A			A			T					T					A	A			A		A			T	A				A		A								A				A
rs31557969 MGI SNP Detail Alliance Variant	Chr1:172319038	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 1763 bp distal	SNP	C/T		C		C	T	T		C		C			C								C					C	C			C					C	C				C		C												C
rs31557968 MGI SNP Detail Alliance Variant	Chr1:172319047	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 1772 bp distal	SNP	A/G		A		A	G			A		A			A			G					G					A	A			A		A			G	A				A		A								A				A
rs232386748 MGI SNP Detail Alliance Variant	Chr1:172319060	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 1785 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs248959328 MGI SNP Detail Alliance Variant	Chr1:172319139	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 1864 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs46705329 MGI SNP Detail Alliance Variant	Chr1:172319166	Igsf9 Intron Igsf9 Noncoding-Transcript-Variant Rr423588 1891 bp distal	SNP	C/T				T	C																					T
rs230940940 MGI SNP Detail Alliance Variant	Chr1:172319201	Igsf9 Coding-Synonymous Igsf9 Noncoding-Transcript-Variant Rr423588 1926 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G

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Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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