About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID 		Rr423604
regulatory region 423604
MGI:7885736

<< first < prev1 next > last >>
Showing SNP(s) 1 - 63 of 63

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs217518988
MGI SNP Detail		 Chr1:172339608 Rr423604 1963 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242470656
MGI SNP Detail		 Chr1:172339811 Rr423604 1760 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G G A G G G G G G G G G G G G G G G G G G G
rs580456686
MGI SNP Detail		 Chr1:172340138 Rr423604 1433 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256553571
MGI SNP Detail		 Chr1:172340174 Rr423604 1397 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs31748493
MGI SNP Detail		 Chr1:172340231 Rr423604 1340 bp proximal
 SNP A/G A A G A A G
rs30744788
MGI SNP Detail		 Chr1:172340262 Rr423601 within coordinates of
Rr423604 1309 bp proximal
 SNP C/T T T C T T C T T T C T C T T C T T
rs250938473
MGI SNP Detail		 Chr1:172340300 Rr423601 within coordinates of
Rr423604 1271 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs221452346
MGI SNP Detail		 Chr1:172340386 Rr423601 within coordinates of
Rr423604 1185 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs31564007
MGI SNP Detail		 Chr1:172340388 Rr423601 within coordinates of
Rr423604 1183 bp proximal
 SNP G/T G G T G G T G G G T T T G T T G
rs261055525
MGI SNP Detail		 Chr1:172340399 Rr423601 within coordinates of
Rr423604 1172 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs225533114
MGI SNP Detail		 Chr1:172340448 Rr423601 within coordinates of
Rr423604 1123 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs244932068
MGI SNP Detail		 Chr1:172340515 Rr396590 within coordinates of
Rr423601 within coordinates of
Rr423604 1056 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs48194587
MGI SNP Detail		 Chr1:172340567 Rr396590 within coordinates of
Rr423601 within coordinates of
Rr423604 1004 bp proximal
 SNP G/T G G T G G G
rs47337074
MGI SNP Detail		 Chr1:172340573 Rr396590 within coordinates of
Rr423601 within coordinates of
Rr423604 998 bp proximal
 SNP A/C C C A C C C
rs243781421
MGI SNP Detail		 Chr1:172340596 Rr396590 within coordinates of
Rr423601 within coordinates of
Rr423602 within coordinates of
Rr423604 975 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs255509707
MGI SNP Detail		 Chr1:172340630 Rr396590 within coordinates of
Rr423601 within coordinates of
Rr423604 941 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31564006
MGI SNP Detail		 Chr1:172340649 Gm70635 within coordinates of
Rr396590 within coordinates of
Rr423601 within coordinates of
Rr423604 922 bp proximal
 SNP A/G G G G G G G G A A G G G G A G G G G
rs245431935
MGI SNP Detail		 Chr1:172340726 Gm70635 within coordinates of
Rr396590 within coordinates of
Rr423601 within coordinates of
Rr423604 845 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs219368253
MGI SNP Detail		 Chr1:172340978 Gm37125 within coordinates of
Gm57108 within coordinates of
Gm70635 within coordinates of
Rr423603 within coordinates of
Rr423604 593 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs239650079
MGI SNP Detail		 Chr1:172340999 Gm37125 within coordinates of
Gm57108 within coordinates of
Gm70635 within coordinates of
Rr423603 within coordinates of
Rr423604 572 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G G A G G G G G G G G G G G G G G G G G G G
rs212260937
MGI SNP Detail		 Chr1:172341141 Gm37125 within coordinates of
Gm57108 within coordinates of
Gm70635 within coordinates of
Rr423603 within coordinates of
Rr423604 430 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233353878
MGI SNP Detail		 Chr1:172341202 Gm37125 within coordinates of
Gm57108 within coordinates of
Gm70635 within coordinates of
Rr423603 within coordinates of
Rr423604 369 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251518311
MGI SNP Detail		 Chr1:172341313 Gm37125 within coordinates of
Gm57108 within coordinates of
Gm70635 within coordinates of
Rr423603 within coordinates of
Rr423604 258 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs221491299
MGI SNP Detail		 Chr1:172341519 Gm37125 within coordinates of
Gm57108 within coordinates of
Gm70635 within coordinates of
Rr423603 within coordinates of
Rr423604 52 bp proximal
Tssr15228 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C C T C C C C C C C C C C C C C C C C C C C
rs233531942
MGI SNP Detail		 Chr1:172341675 Gm37125 within coordinates of
Gm70635 within coordinates of
Rr396591 within coordinates of
Rr423604 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G C G G G G G C G G G G G G G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs254920399
MGI SNP Detail		 Chr1:172341717 Gm37125 within coordinates of
Gm70635 within coordinates of
Rr396591 within coordinates of
Rr423604 12 bp distal
Rr423605 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs31564005
MGI SNP Detail		 Chr1:172341757 Gm37125 within coordinates of
Gm70635 within coordinates of
Rr396591 within coordinates of
Rr423604 52 bp distal
Rr423605 within coordinates of
 SNP A/G G G G G G G G A A G G G G A G G G G
rs241904408
MGI SNP Detail		 Chr1:172341759 Gm37125 within coordinates of
Gm70635 within coordinates of
Rr396591 within coordinates of
Rr423604 54 bp distal
Rr423605 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs264618758
MGI SNP Detail		 Chr1:172341839 Gm37125 within coordinates of
Gm70635 within coordinates of
Rr396591 within coordinates of
Rr423604 134 bp distal
Rr423605 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223209846
MGI SNP Detail		 Chr1:172341900 Gm37125 within coordinates of
Gm70635 within coordinates of
Rr396591 within coordinates of
Rr423604 195 bp distal
Rr423605 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31564004
MGI SNP Detail		 Chr1:172341903 Gm37125 within coordinates of
Gm70635 within coordinates of
Rr423604 198 bp distal
Rr423605 within coordinates of
 SNP A/G G G G G G G G A A G G G G A G G G G
rs258022566
MGI SNP Detail		 Chr1:172341918 Gm37125 within coordinates of
Gm70635 within coordinates of
Rr423604 213 bp distal
Rr423605 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs226812544
MGI SNP Detail		 Chr1:172341944 Gm37125 within coordinates of
Gm70635 within coordinates of
Rr423604 239 bp distal
Rr423605 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs46049029
MGI SNP Detail		 Chr1:172342055 Gm37125 within coordinates of
Gm70635 within coordinates of
Rr423604 350 bp distal
Rr423605 within coordinates of
 SNP A/T A A T A A A
rs107622180
MGI SNP Detail		 Chr1:172342067 Gm37125 within coordinates of
Gm70635 within coordinates of
Rr423604 362 bp distal
Rr423605 within coordinates of
 SNP C C C
rs107697728
MGI SNP Detail		 Chr1:172342126 Gm37125 within coordinates of
Gm70635 within coordinates of
Rr423604 421 bp distal
Rr423605 within coordinates of
 SNP G/T T G
rs264454195
MGI SNP Detail		 Chr1:172342128 Gm37125 within coordinates of
Gm70635 within coordinates of
Rr423604 423 bp distal
Rr423605 within coordinates of
 SNP G/T G G G G G T G G G G G G T T T T T T G T G G T G G G G T G G G G T T G G G G G G G G G G G G G G G G G G G
rs234317957
MGI SNP Detail		 Chr1:172342129 Gm37125 within coordinates of
Gm70635 within coordinates of
Rr423604 424 bp distal
Rr423605 within coordinates of
 SNP C/T C C C C C T C C C C C C T T T T T T C T C C T C C C C T C C C C T T C C C C C C C C C C C C C C C C C C C
rs49757944
MGI SNP Detail		 Chr1:172342191 Gm37125 within coordinates of
Gm70635 within coordinates of
Rr423604 486 bp distal
Rr423605 within coordinates of
 SNP A/G G A G A G
rs253027319
MGI SNP Detail		 Chr1:172342198 Gm37125 within coordinates of
Gm70635 within coordinates of
Rr423604 493 bp distal
Rr423605 within coordinates of
 SNP G/T T G
rs233137838
MGI SNP Detail		 Chr1:172342218 Gm37125 within coordinates of
Gm70635 within coordinates of
Rr423604 513 bp distal
Rr423605 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs49057531
MGI SNP Detail		 Chr1:172342281 Gm37125 within coordinates of
Gm70635 within coordinates of
Rr423604 576 bp distal
 SNP C/T C T C C C
rs31563283
MGI SNP Detail		 Chr1:172342342 Gm37125 within coordinates of
Gm70635 within coordinates of
Rr423604 637 bp distal
 SNP A/T T T T T T A A T T T T A T T T T
rs31563282
MGI SNP Detail		 Chr1:172342354 Gm37125 within coordinates of
Gm70635 within coordinates of
Rr423604 649 bp distal
 SNP C/T C C C C C T T C C C C T C C C C
rs221526725
MGI SNP Detail		 Chr1:172342382 Gm37125 within coordinates of
Gm70635 within coordinates of
Rr423604 677 bp distal
 SNP A/C A C
rs243970771
MGI SNP Detail		 Chr1:172342390 Gm37125 within coordinates of
Gm70635 within coordinates of
Rr423604 685 bp distal
 SNP A/C A C
rs262735832
MGI SNP Detail		 Chr1:172342398 Gm37125 within coordinates of
Gm70635 within coordinates of
Rr423604 693 bp distal
 SNP A/C A C
rs225158523
MGI SNP Detail		 Chr1:172342406 Gm37125 within coordinates of
Gm70635 within coordinates of
Rr423604 701 bp distal
 SNP A/C A C
rs251828316
MGI SNP Detail		 Chr1:172342471 Gm70635 within coordinates of
Rr423604 766 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220752733
MGI SNP Detail		 Chr1:172342472 Gm70635 within coordinates of
Rr423604 767 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs241507521
MGI SNP Detail		 Chr1:172342517 Gm70635 within coordinates of
Rr423604 812 bp distal
Rr423606 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs48147515
MGI SNP Detail		 Chr1:172342522 Gm70635 within coordinates of
Rr423604 817 bp distal
Rr423606 within coordinates of
 SNP A/G A G A A A
rs233147499
MGI SNP Detail		 Chr1:172342536 Gm70635 within coordinates of
Rr423604 831 bp distal
Rr423606 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs245233565
MGI SNP Detail		 Chr1:172342540 Gm70635 within coordinates of
Rr423604 835 bp distal
Rr423606 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C C T C C C C C C C C C C C C C C C C C C C
rs31563281
MGI SNP Detail		 Chr1:172342565 Gm70635 within coordinates of
Rr423604 860 bp distal
Rr423606 within coordinates of
 SNP C/T C C C C C T T C C C C T C C
rs31563280
MGI SNP Detail		 Chr1:172342700 Gm70635 within coordinates of
Rr423604 995 bp distal
Rr423606 within coordinates of
 SNP G/T T T G T T G T G G G G T G G G T T
rs31563279
MGI SNP Detail		 Chr1:172342754 Gm70635 within coordinates of
Rr423604 1049 bp distal
Rr423606 within coordinates of
 SNP A/C C C C C C C C A A C C C C A C C C C C
rs216158543
MGI SNP Detail		 Chr1:172342813 Gm70635 within coordinates of
Rr423604 1108 bp distal
Rr423606 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227754111
MGI SNP Detail		 Chr1:172342889 Gm70635 within coordinates of
Rr423604 1184 bp distal
Rr423606 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31563278
MGI SNP Detail		 Chr1:172342908 Gm70635 within coordinates of
Rr423604 1203 bp distal
Rr423606 within coordinates of
 SNP A/G A A A A A A A G G A A A A G A A A A A
rs33859376
MGI SNP Detail		 Chr1:172343082 Gm70635 within coordinates of
Rr423604 1377 bp distal
Rr423606 within coordinates of
 SNP A/C A C A C
rs235123652
MGI SNP Detail		 Chr1:172343109 Gm70635 within coordinates of
Rr423604 1404 bp distal
Rr423606 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs260623155
MGI SNP Detail		 Chr1:172343187 Gm70635 within coordinates of
Rr423604 1482 bp distal
Rr423606 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
<< first < prev1 next > last >>
Showing SNP(s) 1 - 63 of 63
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory
Building initial tooltip...