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Mouse SNP Summary
Symbol
Name
ID
Rr423664
regulatory region 423664
MGI:7885796

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs249083534
MGI SNP Detail
Chr1:172899969 Rr423664 1989 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs218006904
MGI SNP Detail
Chr1:172900016 Rr423664 1942 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs46043506
MGI SNP Detail
Chr1:172900018 Rr423664 1940 bp proximal
SNP C C C C C C
rs250039376
MGI SNP Detail
Chr1:172900020 Rr423664 1938 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31433335
MGI SNP Detail
Chr1:172900104 Rr423664 1854 bp proximal
SNP A/G A A G A A A
rs32687310
MGI SNP Detail
Chr1:172900121 Rr423664 1837 bp proximal
SNP A/C C C A C C C
rs31971901
MGI SNP Detail
Chr1:172900122 Rr423664 1836 bp proximal
SNP C/G C C G C C C
rs226558039
MGI SNP Detail
Chr1:172900172 Rr423664 1786 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237800828
MGI SNP Detail
Chr1:172900192 Rr423664 1766 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs255837009
MGI SNP Detail
Chr1:172900224 Rr423664 1734 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs226199138
MGI SNP Detail
Chr1:172900333 Rr423664 1625 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs244696622
MGI SNP Detail
Chr1:172900344 Rr423664 1614 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs265642001
MGI SNP Detail
Chr1:172900345 Rr423664 1613 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32624870
MGI SNP Detail
Chr1:172900406 Rr423664 1552 bp proximal
SNP C/T T T C T T T
rs32392252
MGI SNP Detail
Chr1:172900434 Rr423664 1524 bp proximal
SNP A/G G G A G G G
rs217783133
MGI SNP Detail
Chr1:172900576 Rr423664 1382 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230617449
MGI SNP Detail
Chr1:172900580 Rr423664 1378 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs243191771
MGI SNP Detail
Chr1:172900587 Rr423664 1371 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs31428537
MGI SNP Detail
Chr1:172900636 Rr423664 1322 bp proximal
SNP C/T C T C C
rs232319860
MGI SNP Detail
Chr1:172900651 Rr423664 1307 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs257150522
MGI SNP Detail
Chr1:172900675 Rr423664 1283 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs225340203
MGI SNP Detail
Chr1:172900683 Rr423664 1275 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs32492774
MGI SNP Detail
Chr1:172900689 Rr423664 1269 bp proximal
SNP C/T C T C C
rs31488429
MGI SNP Detail
Chr1:172900702 Rr423664 1256 bp proximal
SNP C/T C C T C T C
rs222932731
MGI SNP Detail
Chr1:172900746 Rr423664 1212 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs238346049
MGI SNP Detail
Chr1:172900747 Rr423664 1211 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs249339687
MGI SNP Detail
Chr1:172900758 Rr423664 1200 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs220064798
MGI SNP Detail
Chr1:172900767 Rr423664 1191 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs46788951
MGI SNP Detail
Chr1:172900773 Rr423664 1185 bp proximal
SNP C/T T C C T C
rs263400603
MGI SNP Detail
Chr1:172900806 Rr423664 1152 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231761620
MGI SNP Detail
Chr1:172900824 Rr423664 1134 bp proximal
SNP C/T T T T C C C T T C C T T C C C C C C C C C C C C C C C C C T T T C C T C C C C T C C T C C C C C C C C T C
rs50324947
MGI SNP Detail
Chr1:172900885 Rr423664 1073 bp proximal
SNP C/G G G C G
rs265919049
MGI SNP Detail
Chr1:172900922 Rr423664 1036 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs261715666
MGI SNP Detail
Chr1:172900982 Rr423664 976 bp proximal
SNP A/C C A
rs242186927
MGI SNP Detail
Chr1:172900988 Rr423664 970 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs214326063
MGI SNP Detail
Chr1:172900989 Rr423664 969 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32280346
MGI SNP Detail
Chr1:172901010 Rr423664 948 bp proximal
SNP C/T C T
rs255528775
MGI SNP Detail
Chr1:172901029 Rr423664 929 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs31600752
MGI SNP Detail
Chr1:172901062 Rr423664 896 bp proximal
SNP A/C C A C A
rs240091542
MGI SNP Detail
Chr1:172901072 Rr423664 886 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs239423761
MGI SNP Detail
Chr1:172901097 Rr423664 861 bp proximal
SNP A A A
rs250115619
MGI SNP Detail
Chr1:172901111 Rr423664 847 bp proximal
SNP C C C
rs31243036
MGI SNP Detail
Chr1:172901118 Rr423664 840 bp proximal
SNP C/T T C
rs249871339
MGI SNP Detail
Chr1:172901153 Rr423664 805 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs220578491
MGI SNP Detail
Chr1:172901160 Rr423664 798 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs32572903
MGI SNP Detail
Chr1:172901170 Rr423664 788 bp proximal
SNP C/T C T C T
rs263232048
MGI SNP Detail
Chr1:172901210 Rr423664 748 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs223862671
MGI SNP Detail
Chr1:172901229 Rr423664 729 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs47153533
MGI SNP Detail
Chr1:172901243 Rr423664 715 bp proximal
SNP T T T T
rs263882264
MGI SNP Detail
Chr1:172901254 Rr423664 704 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs224327382
MGI SNP Detail
Chr1:172901273 Rr423664 685 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs51778826
MGI SNP Detail
Chr1:172901275 Rr423664 683 bp proximal
SNP T T T T
rs256146704
MGI SNP Detail
Chr1:172901323 Rr423664 635 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs48415944
MGI SNP Detail
Chr1:172901327 Rr423664 631 bp proximal
SNP G G G G
rs250849993
MGI SNP Detail
Chr1:172901339 Rr423664 619 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs49635214
MGI SNP Detail
Chr1:172901347 Rr423664 611 bp proximal
SNP T T T T T
rs46801794
MGI SNP Detail
Chr1:172901365 Rr423664 593 bp proximal
SNP A A A A
rs49341355
MGI SNP Detail
Chr1:172901388 Rr423664 570 bp proximal
SNP A/C C A C
rs47769281
MGI SNP Detail
Chr1:172901392 Rr423664 566 bp proximal
SNP A/G G A G A
rs51568315
MGI SNP Detail
Chr1:172901423 Rr423664 535 bp proximal
SNP A A A A
rs250019249
MGI SNP Detail
Chr1:172901552 Rr423664 406 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs50353659
MGI SNP Detail
Chr1:172901638 Rr423664 320 bp proximal
SNP C C C C C
rs46046468
MGI SNP Detail
Chr1:172901658 Rr423664 300 bp proximal
SNP C C C C C
rs259153606
MGI SNP Detail
Chr1:172901665 Rr423664 293 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs223898874
MGI SNP Detail
Chr1:172901679 Rr423664 279 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs48795218
MGI SNP Detail
Chr1:172901691 Rr423664 267 bp proximal
SNP T T T T T
rs582062684
MGI SNP Detail
Chr1:172901820 Rr423664 138 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs48131866
MGI SNP Detail
Chr1:172901842 Rr423664 116 bp proximal
SNP C C C C
rs46439336
MGI SNP Detail
Chr1:172901905 Rr423664 53 bp proximal
SNP A/G G A G
rs48679563
MGI SNP Detail
Chr1:172901906 Rr423664 52 bp proximal
SNP A/T A A A T A
rs235797932
MGI SNP Detail
Chr1:172901979 Rr423664 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs47136983
MGI SNP Detail
Chr1:172901981 Rr423664 2 bp distal
SNP T T T T T T
rs50656474
MGI SNP Detail
Chr1:172902028 Rr423664 49 bp distal
SNP A A A A A A
rs248795995
MGI SNP Detail
Chr1:172902059 Rr423664 80 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31627241
MGI SNP Detail
Chr1:172902100 Rr423664 121 bp distal
SNP A/T T T T A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs263133713
MGI SNP Detail
Chr1:172902136 Rr423664 157 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs232328305
MGI SNP Detail
Chr1:172902182 Rr423664 203 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254909014
MGI SNP Detail
Chr1:172902185 Rr423664 206 bp distal
SNP G/T G G G G T G G G G G G T T T T T T G T G G T G G G G T G G G G T T G G G G G G G G G G G G G T G G G G
rs260671443
MGI SNP Detail
Chr1:172902186 Rr423664 207 bp distal
SNP A/G G G G G G A G G G G G G A A A A A A G G G G G G G G G A G G G G A G G G G G G G G G G G G G G G G G G G
rs225070389
MGI SNP Detail
Chr1:172902189 Rr423664 210 bp distal
SNP G/T G G G G T G G G G G T T T T T T G T G G T G G G G T G G G G T T G G G G G G G G G G G G G G G G G G
rs47992637
MGI SNP Detail
Chr1:172902281 Rr423664 302 bp distal
SNP C C C C C C
rs48141154
MGI SNP Detail
Chr1:172902291 Rr423664 312 bp distal
SNP T T T T T T
rs236604768
MGI SNP Detail
Chr1:172902382 Rr423664 403 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs31627240
MGI SNP Detail
Chr1:172902398 Rr423664 419 bp distal
SNP A/G G G G G G A G G G A G G
rs216087490
MGI SNP Detail
Chr1:172902399 Rr423664 420 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs46743321
MGI SNP Detail
Chr1:172902432 Rr423664 453 bp distal
SNP T T T T T
rs48725226
MGI SNP Detail
Chr1:172902433 Rr423664 454 bp distal
SNP A/G G A G A
rs31627239
MGI SNP Detail
Chr1:172902506 Rr423664 527 bp distal
SNP C/T T T T C T T C T
rs229650507
MGI SNP Detail
Chr1:172902619 Rr423664 640 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs49529208
MGI SNP Detail
Chr1:172902636 Rr423664 657 bp distal
SNP A A A A A
rs51267298
MGI SNP Detail
Chr1:172902692 Rr423664 713 bp distal
SNP C C C C C
rs246444847
MGI SNP Detail
Chr1:172902700 Rr423664 721 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs47025430
MGI SNP Detail
Chr1:172902711 Rr423664 732 bp distal
SNP T T T T T T
rs31627238
MGI SNP Detail
Chr1:172902747 Rr423664 768 bp distal
SNP C/T T T T T T C T T T C C C T
rs50058957
MGI SNP Detail
Chr1:172902771 Rr423664 792 bp distal
SNP C/T C T C
rs31627237
MGI SNP Detail
Chr1:172902814 Rr423664 835 bp distal
SNP A/G G G A G G G A G
rs225009404
MGI SNP Detail
Chr1:172902820 Rr423664 841 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs243588762
MGI SNP Detail
Chr1:172902836 Rr423664 857 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs50750102
MGI SNP Detail
Chr1:172902875 Rr423664 896 bp distal
SNP A A A A A A
rs46027271
MGI SNP Detail
Chr1:172902891 Rr423664 912 bp distal
SNP A A A A A A
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Showing SNP(s) 1 - 100 of 152

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
07/29/2025
MGI 6.24
The Jackson Laboratory

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