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Mouse SNP Summary
Symbol
Name
ID 		Rr424085
regulatory region 424085
MGI:7886217

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Showing SNP(s) 1 - 62 of 62

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs586726792
MGI SNP Detail
Alliance Variant		 Chr1:178045319 Desi2 Intron
Desi2 mRNA-UTR
Rr424085 1770 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs235769062
MGI SNP Detail
Alliance Variant		 Chr1:178045402 Desi2 Intron
Desi2 mRNA-UTR
Rr424085 1687 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262170725
MGI SNP Detail
Alliance Variant		 Chr1:178045439 Desi2 Intron
Desi2 mRNA-UTR
Rr424085 1650 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs581329575
MGI SNP Detail
Alliance Variant		 Chr1:178045673 Desi2 Intron
Rr424085 1416 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T
rs386913422
MGI SNP Detail
Alliance Variant		 Chr1:178045677 Desi2 Intron
Rr424085 1412 bp proximal
 SNP C/T T C T C C C C C C C C C C C C T T T C C C C T C C T C C C C T C T T C C C C C C C T T T T
rs223758785
MGI SNP Detail
Alliance Variant		 Chr1:178045989 Desi2 Intron
Rr424085 1100 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238201861
MGI SNP Detail
Alliance Variant		 Chr1:178046214 Desi2 Intron
Rr424085 875 bp proximal
 SNP A/C C C C C A C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C C C C A C C C C C C C C C
rs251035458
MGI SNP Detail
Alliance Variant		 Chr1:178046302 Desi2 Intron
Rr424085 787 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs31049918
MGI SNP Detail
Alliance Variant		 Chr1:178046333 Desi2 Intron
Rr424085 756 bp proximal
 SNP A/G A G A A G A G A G G A
rs240536500
MGI SNP Detail
Alliance Variant		 Chr1:178046590 Desi2 Intron
Rr424085 499 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs264245108
MGI SNP Detail
Alliance Variant		 Chr1:178046752 Desi2 Intron
Rr424085 337 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs228192551
MGI SNP Detail
Alliance Variant		 Chr1:178046784 Desi2 Intron
Rr424085 305 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs242139469
MGI SNP Detail
Alliance Variant		 Chr1:178046829 Desi2 Intron
Rr424085 260 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265051823
MGI SNP Detail
Alliance Variant		 Chr1:178046870 Desi2 Intron
Rr424085 219 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226441342
MGI SNP Detail
Alliance Variant		 Chr1:178047001 Desi2 Intron
Rr424085 88 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs246296745
MGI SNP Detail
Alliance Variant		 Chr1:178047085 Desi2 Intron
Rr424085 4 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32635657
MGI SNP Detail
Alliance Variant		 Chr1:178047190 Desi2 Intron
Rr424085 within coordinates of
 SNP C/T C T T T T C T C T C
rs586928355
MGI SNP Detail
Alliance Variant		 Chr1:178047198 Desi2 Intron
Rr424085 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31829590
MGI SNP Detail
Alliance Variant		 Chr1:178047220 Desi2 Intron
Rr424085 within coordinates of
 SNP A/T A T T
rs260323089
MGI SNP Detail
Alliance Variant		 Chr1:178047258 Desi2 Intron
Rr424085 within coordinates of
 SNP C/G C G C G G G G G G G G G G G G G G G G G G G G G G C G G G C G G G G G C G C C G G G G G G G G G G C C G G
rs212087851
MGI SNP Detail
Alliance Variant		 Chr1:178047382 Desi2 Intron
Rr424085 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31645689
MGI SNP Detail
Alliance Variant		 Chr1:178047406 Desi2 Intron
Rr424085 within coordinates of
 SNP A/G G A G G
rs251067066
MGI SNP Detail
Alliance Variant		 Chr1:178047455 Desi2 Intron
Rr424085 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214734531
MGI SNP Detail
Alliance Variant		 Chr1:178047477 Desi2 Intron
Rr424085 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs233103922
MGI SNP Detail
Alliance Variant		 Chr1:178047547 Desi2 Intron
Rr424085 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs47870167
MGI SNP Detail
Alliance Variant		 Chr1:178047683 Desi2 Intron
Rr424085 within coordinates of
 SNP A/C A C A A A A
rs234072703
MGI SNP Detail
Alliance Variant		 Chr1:178047757 Desi2 Intron
Rr424085 12 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264050899
MGI SNP Detail
Alliance Variant		 Chr1:178047823 Desi2 Intron
Rr424085 78 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs219914706
MGI SNP Detail
Alliance Variant		 Chr1:178047995 Desi2 Intron
Rr424085 250 bp distal
 SNP G/T G T G G T T T T G T T T T T T T G G G T T G T T G T G T G T T T G T G T G G T T T T T T T G G G G G
rs244570061
MGI SNP Detail
Alliance Variant		 Chr1:178048000 Desi2 Intron
Rr424085 255 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs262355210
MGI SNP Detail
Alliance Variant		 Chr1:178048265 Desi2 Intron
Rr424085 520 bp distal
 SNP A/G G G G G A G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G G G G G G G G G G G G G
rs220230092
MGI SNP Detail
Alliance Variant		 Chr1:178048338 Desi2 Intron
Rr424085 593 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240415759
MGI SNP Detail
Alliance Variant		 Chr1:178048342 Desi2 Intron
Rr424085 597 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259774840
MGI SNP Detail
Alliance Variant		 Chr1:178048373 Desi2 Intron
Rr424085 628 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228688974
MGI SNP Detail
Alliance Variant		 Chr1:178048466 Desi2 Intron
Rr424085 721 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs254868977
MGI SNP Detail
Alliance Variant		 Chr1:178048472 Desi2 Intron
Rr424085 727 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs264682136
MGI SNP Detail
Alliance Variant		 Chr1:178048564 Desi2 Intron
Rr424085 819 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs228882007
MGI SNP Detail
Alliance Variant		 Chr1:178048630 Desi2 Intron
Rr424085 885 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs584295796
MGI SNP Detail
Alliance Variant		 Chr1:178048649 Desi2 Intron
Rr424085 904 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs32811046
MGI SNP Detail
Alliance Variant		 Chr1:178048665 Desi2 Intron
Rr424085 920 bp distal
 SNP A/T T A T T T A A A T
rs578484577
MGI SNP Detail
Alliance Variant		 Chr1:178048677 Desi2 Intron
Rr424085 932 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32468828
MGI SNP Detail
Alliance Variant		 Chr1:178048745 Desi2 Intron
Rr424085 1000 bp distal
 SNP C/T C T C C
rs213157383
MGI SNP Detail
Alliance Variant		 Chr1:178048784 Desi2 Intron
Rr424085 1039 bp distal
 SNP A/T T A
rs233160595
MGI SNP Detail
Alliance Variant		 Chr1:178048853 Desi2 Intron
Rr424085 1108 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246259086
MGI SNP Detail
Alliance Variant		 Chr1:178048861 Desi2 Intron
Rr424085 1116 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs31401698
MGI SNP Detail
Alliance Variant		 Chr1:178048868 Desi2 Intron
Rr424085 1123 bp distal
 SNP A/G G A G G
rs241872517
MGI SNP Detail
Alliance Variant		 Chr1:178048916 Desi2 Intron
Rr424085 1171 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs260706945
MGI SNP Detail
Alliance Variant		 Chr1:178048935 Desi2 Intron
Rr424085 1190 bp distal
 SNP A/G G G G G A G G G G G G G G G G G G G G G G G G G G G G A G G G G G A G G G G G G G G G A G G G G G G G G G
rs32303070
MGI SNP Detail
Alliance Variant		 Chr1:178049174 Desi2 Intron
Rr424085 1429 bp distal
 SNP A/G G A G G
rs235185600
MGI SNP Detail
Alliance Variant		 Chr1:178049281 Desi2 Intron
Rr424085 1536 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs250887006
MGI SNP Detail
Alliance Variant		 Chr1:178049359 Desi2 Intron
Rr424085 1614 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs220286463
MGI SNP Detail
Alliance Variant		 Chr1:178049395 Desi2 Intron
Rr424085 1650 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs240480189
MGI SNP Detail
Alliance Variant		 Chr1:178049401 Desi2 Intron
Rr424085 1656 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs259839794
MGI SNP Detail
Alliance Variant		 Chr1:178049483 Desi2 Intron
Rr424085 1738 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs222529230
MGI SNP Detail
Alliance Variant		 Chr1:178049510 Desi2 Intron
Rr424085 1765 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs251027403
MGI SNP Detail
Alliance Variant		 Chr1:178049618 Desi2 Intron
Rr424085 1873 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs261627678
MGI SNP Detail
Alliance Variant		 Chr1:178049670 Desi2 Intron
Rr424085 1925 bp distal
 SNP C/T C C C C T C C C C C C C C C C C C C C C C C C C C C C T C C C C C T C C C C C C C C C T C C C C C C C C C
rs229415696
MGI SNP Detail
Alliance Variant		 Chr1:178049682 Desi2 Intron
Rr424085 1937 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs250800479
MGI SNP Detail
Alliance Variant		 Chr1:178049683 Desi2 Intron
Rr424085 1938 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs31850163
MGI SNP Detail
Alliance Variant		 Chr1:178049686 Desi2 Intron
Rr424085 1941 bp distal
 SNP C/T T C
rs227207521
MGI SNP Detail
Alliance Variant		 Chr1:178049717 Desi2 Intron
Rr424085 1972 bp distal
 SNP A/G G G G G A G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G G G G A G G G G G G G G G
rs582789863
MGI SNP Detail
Alliance Variant		 Chr1:178049722 Desi2 Intron
Rr424085 1977 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 62 of 62
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory
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