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Mouse SNP Summary
Symbol
Name
ID
Rr424588
regulatory region 424588
MGI:7886720

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs31875139
MGI SNP Detail
Alliance Variant
Chr1:180637435 H3f3a Intron
Rr424588 2000 bp proximal
SNP C/T C C T C
rs578490129
MGI SNP Detail
Alliance Variant
Chr1:180637436 H3f3a Intron
Rr424588 1999 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs246925832
MGI SNP Detail
Alliance Variant
Chr1:180637588 H3f3a Intron
Rr424588 1847 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs260925084
MGI SNP Detail
Alliance Variant
Chr1:180637697 H3f3a Coding-Synonymous
Rr424588 1738 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs228964482
MGI SNP Detail
Alliance Variant
Chr1:180637820 H3f3a Coding-Synonymous
Rr424588 1615 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs243186437
MGI SNP Detail
Alliance Variant
Chr1:180637858 H3f3a Intron
Rr424588 1577 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs581934517
MGI SNP Detail
Alliance Variant
Chr1:180637866 H3f3a Intron
Rr424588 1569 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs32729262
MGI SNP Detail
Alliance Variant
Chr1:180637917 H3f3a Intron
Rr424588 1518 bp proximal
SNP A/T A A A A A A A A A A T A A A A
rs32729955
MGI SNP Detail
Alliance Variant
Chr1:180637923 H3f3a Intron
Rr424588 1512 bp proximal
SNP A/G G G G G G G G G G G G G A G
rs586366453
MGI SNP Detail
Alliance Variant
Chr1:180637992 H3f3a Intron
Rr424588 1443 bp proximal
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs256128125
MGI SNP Detail
Alliance Variant
Chr1:180638030 H3f3a Intron
Rr424588 1405 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs215632484
MGI SNP Detail
Alliance Variant
Chr1:180638050 H3f3a Intron
Rr424588 1385 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs240847545
MGI SNP Detail
Alliance Variant
Chr1:180638236 H3f3a Intron
Rr424588 1199 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs32729958
MGI SNP Detail
Alliance Variant
Chr1:180638294 H3f3a Intron
Rr424588 1141 bp proximal
SNP G/T T T T T T T G T T T G T T T T
rs217287131
MGI SNP Detail
Alliance Variant
Chr1:180638298 H3f3a Intron
Rr424588 1137 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs235283067
MGI SNP Detail
Alliance Variant
Chr1:180638315 H3f3a Intron
Rr424588 1120 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248200901
MGI SNP Detail
Alliance Variant
Chr1:180638365 H3f3a Intron
Rr424588 1070 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs580477804
MGI SNP Detail
Alliance Variant
Chr1:180638410 H3f3a Intron
Rr424588 1025 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs218819700
MGI SNP Detail
Alliance Variant
Chr1:180638455 H3f3a Intron
Rr424588 980 bp proximal
SNP A/C/T A A A A A A A A A A A A A A A A A C A A A A A A C A A A A C A A A A A A C A A A A A A T A A A A
rs32790500
MGI SNP Detail
Alliance Variant
Chr1:180638484 H3f3a Intron
Rr424588 951 bp proximal
SNP C/T C C T
rs586276507
MGI SNP Detail
Alliance Variant
Chr1:180638525 H3f3a Intron
Rr424588 910 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs262543183
MGI SNP Detail
Alliance Variant
Chr1:180638584 H3f3a Intron
Rr424588 851 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs224497833
MGI SNP Detail
Alliance Variant
Chr1:180638688 H3f3a Intron
Rr396664 within coordinates of
Rr424588 747 bp proximal
SNP C/T C C C T C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C
rs249453990
MGI SNP Detail
Alliance Variant
Chr1:180638757 H3f3a Intron
Rr396664 within coordinates of
Rr424588 678 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs32729961
MGI SNP Detail
Alliance Variant
Chr1:180638793 H3f3a Intron
Rr396664 within coordinates of
Rr424588 642 bp proximal
SNP G/T T T T T T T T T T T T T T G T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs223765925
MGI SNP Detail
Alliance Variant
Chr1:180638859 H3f3a Intron
Rr396664 within coordinates of
Rr424588 576 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G
rs236880116
MGI SNP Detail
Alliance Variant
Chr1:180638861 H3f3a Intron
Rr396664 within coordinates of
Rr424588 574 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs579830360
MGI SNP Detail
Alliance Variant
Chr1:180639034 H3f3a Intron
Rr424586 within coordinates of
Rr424588 401 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs256424165
MGI SNP Detail
Alliance Variant
Chr1:180639074 H3f3a Intron
Rr396665 within coordinates of
Rr424586 within coordinates of
Rr424588 361 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229795897
MGI SNP Detail
Alliance Variant
Chr1:180639094 H3f3a Intron
Rr396665 within coordinates of
Rr424586 within coordinates of
Rr424588 341 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251329877
MGI SNP Detail
Alliance Variant
Chr1:180639169 H3f3a Intron
Rr396665 within coordinates of
Rr424586 within coordinates of
Rr424588 266 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs265438913
MGI SNP Detail
Alliance Variant
Chr1:180639229 H3f3a Intron
Rr396665 within coordinates of
Rr424586 within coordinates of
Rr424588 206 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs232282013
MGI SNP Detail
Alliance Variant
Chr1:180639269 H3f3a Intron
Rr396665 within coordinates of
Rr424586 within coordinates of
Rr424588 166 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246559395
MGI SNP Detail
Alliance Variant
Chr1:180639496 Gm71025 within coordinates of
H3f3a mRNA-UTR
Rr424588 within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs583278004
MGI SNP Detail
Alliance Variant
Chr1:180639611 Gm71025 within coordinates of
H3f3a Intron
Rr424588 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs217310635
MGI SNP Detail
Alliance Variant
Chr1:180639659 Gm71025 within coordinates of
H3f3a Intron
Rr424588 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs229935832
MGI SNP Detail
Alliance Variant
Chr1:180639720 Gm71025 within coordinates of
H3f3a Intron
Rr424588 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs243047499
MGI SNP Detail
Alliance Variant
Chr1:180639795 Gm71025 within coordinates of
H3f3a Intron
Rr424588 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs212947551
MGI SNP Detail
Alliance Variant
Chr1:180639849 Gm71025 within coordinates of
H3f3a Intron
Rr424588 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs585395271
MGI SNP Detail
Alliance Variant
Chr1:180639930 Gm71025 within coordinates of
H3f3a Intron
Rr424588 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs238145716
MGI SNP Detail
Alliance Variant
Chr1:180640251 Cpgi1121 within coordinates of
Gm71025 within coordinates of
H3f3a Intron
H3f3a Splice-Site
Rr424588 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G G G G G G G G G G C G G G G
rs258062765
MGI SNP Detail
Alliance Variant
Chr1:180640289 Cpgi1121 within coordinates of
Gm71025 within coordinates of
H3f3a Intron
H3f3a mRNA-UTR
Rr424588 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs224378398
MGI SNP Detail
Alliance Variant
Chr1:180640362 Cpgi1121 within coordinates of
Gm71025 within coordinates of
H3f3a Intron
Rr424588 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs235090635
MGI SNP Detail
Alliance Variant
Chr1:180640375 Cpgi1121 within coordinates of
Gm71025 within coordinates of
H3f3a Intron
Rr424588 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs254669204
MGI SNP Detail
Alliance Variant
Chr1:180640636 Cpgi1121 within coordinates of
H3f3a Intron
Rr424588 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs223817937
MGI SNP Detail
Alliance Variant
Chr1:180640674 Cpgi1121 within coordinates of
H3f3a Intron
Rr424588 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237682718
MGI SNP Detail
Alliance Variant
Chr1:180640982 Cpgi1121 within coordinates of
H3f3a Intron
Rr424588 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs257123683
MGI SNP Detail
Alliance Variant
Chr1:180641007 Cpgi1121 within coordinates of
H3f3a Intron
Rr424588 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs222288921
MGI SNP Detail
Alliance Variant
Chr1:180641021 Cpgi1121 within coordinates of
H3f3a Intron
Rr424588 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs579439982
MGI SNP Detail
Alliance Variant
Chr1:180641097 Cpgi1121 within coordinates of
H3f3a mRNA-UTR
Rr424588 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs246483934
MGI SNP Detail
Alliance Variant
Chr1:180641178 Cpgi1121 within coordinates of
H3f3a Intron
H3f3a mRNA-UTR
Rr396666 within coordinates of
Rr424588 77 bp distal
Rr424590 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs263076907
MGI SNP Detail
Alliance Variant
Chr1:180641231 Cpgi1121 within coordinates of
H3f3a Intron
Rr396666 within coordinates of
Rr424588 130 bp distal
Rr424590 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs232772987
MGI SNP Detail
Alliance Variant
Chr1:180641396 Cpgi1121 within coordinates of
H3f3a mRNA-UTR
H3f3aos within coordinates of
Rr396666 within coordinates of
Rr424588 295 bp distal
Rr424591 within coordinates of
SNP C/G C G C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C
rs587334209
MGI SNP Detail
Alliance Variant
Chr1:180641399 Cpgi1121 within coordinates of
H3f3a mRNA-UTR
H3f3aos within coordinates of
Rr396666 within coordinates of
Rr424588 298 bp distal
Rr424591 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs581739249
MGI SNP Detail
Alliance Variant
Chr1:180641403 Cpgi1121 within coordinates of
H3f3a mRNA-UTR
H3f3aos within coordinates of
Rr396666 within coordinates of
Rr424588 302 bp distal
Rr424591 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs583713450
MGI SNP Detail
Alliance Variant
Chr1:180641408 Cpgi1121 within coordinates of
H3f3a mRNA-UTR
H3f3aos within coordinates of
Rr424588 307 bp distal
Rr424591 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs246594278
MGI SNP Detail
Alliance Variant
Chr1:180641422 Cpgi1121 within coordinates of
H3f3a mRNA-UTR
H3f3aos within coordinates of
Rr424588 321 bp distal
Rr424591 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T C T T C T T T T T T T T T T T T T T T T T T T T T C T T T T
rs259787361
MGI SNP Detail
Alliance Variant
Chr1:180641436 Cpgi1121 within coordinates of
H3f3a mRNA-UTR
H3f3aos within coordinates of
Rr424588 335 bp distal
Rr424591 within coordinates of
Tssr15550 within coordinates of
SNP C/T T C T T T T T C T T T T T T C T T C T T T T T T T T T T T T T T T T C T T T T T C T T T T
rs223377062
MGI SNP Detail
Alliance Variant
Chr1:180641494 Cpgi1121 within coordinates of
H3f3a mRNA-UTR
H3f3aos within coordinates of
Rr424588 393 bp distal
Rr424591 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs243080778
MGI SNP Detail
Chr1:180641514 Cpgi1121 within coordinates of
H3f3aos within coordinates of
Rr424588 413 bp distal
Rr424592 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214147524
MGI SNP Detail
Chr1:180641542 Cpgi1121 within coordinates of
H3f3aos within coordinates of
Rr424588 441 bp distal
Rr424592 within coordinates of
SNP C/T T T C T T T T T C T T T T T T T C T C C T T T C T T T T T T T T T T C T C T T C T T C C T C T
rs236300874
MGI SNP Detail
Chr1:180641567 Cpgi1121 within coordinates of
H3f3aos within coordinates of
Rr424588 466 bp distal
Rr424592 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs256329298
MGI SNP Detail
Chr1:180641599 Cpgi1121 within coordinates of
H3f3aos within coordinates of
Rr424588 498 bp distal
Rr424592 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs215945381
MGI SNP Detail
Chr1:180641638 Cpgi1121 within coordinates of
H3f3aos within coordinates of
Rr424588 537 bp distal
Rr424592 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs31913889
MGI SNP Detail
Chr1:180641741 Cpgi1121 within coordinates of
H3f3aos within coordinates of
Rr424588 640 bp distal
Rr424592 within coordinates of
SNP A/G G A G
rs254596440
MGI SNP Detail
Chr1:180641759 Cpgi1121 within coordinates of
H3f3aos within coordinates of
Rr424588 658 bp distal
Rr424592 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G A G G G G A G G G A G A G
rs31335139
MGI SNP Detail
Chr1:180641818 Cpgi1121 within coordinates of
H3f3aos within coordinates of
Rr424588 717 bp distal
Rr424592 within coordinates of
SNP C/G C G C
rs230108581
MGI SNP Detail
Chr1:180641825 Cpgi1121 within coordinates of
H3f3aos within coordinates of
Rr424588 724 bp distal
Rr424592 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs256693016
MGI SNP Detail
Chr1:180641875 Cpgi1121 within coordinates of
H3f3aos within coordinates of
Rr424588 774 bp distal
Rr424592 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs222591466
MGI SNP Detail
Chr1:180641885 Cpgi1121 within coordinates of
H3f3aos within coordinates of
Rr424588 784 bp distal
Rr424592 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G
rs243749354
MGI SNP Detail
Chr1:180642043 Cpgi1121 within coordinates of
H3f3aos within coordinates of
Rr424588 942 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs262693136
MGI SNP Detail
Chr1:180642088 Cpgi1121 within coordinates of
H3f3aos within coordinates of
Rr424588 987 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32767541
MGI SNP Detail
Chr1:180642135 Cpgi1121 within coordinates of
H3f3aos within coordinates of
Rr424588 1034 bp distal
SNP C/T C T C C
rs32156865
MGI SNP Detail
Chr1:180642202 Cpgi1121 within coordinates of
H3f3aos within coordinates of
Rr424588 1101 bp distal
SNP A/G G A G G
rs259622441
MGI SNP Detail
Chr1:180642266 H3f3aos within coordinates of
Rr424588 1165 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs32434017
MGI SNP Detail
Chr1:180642279 H3f3aos within coordinates of
Rr424588 1178 bp distal
SNP A/G G A G G
rs236540044
MGI SNP Detail
Chr1:180642288 H3f3aos within coordinates of
Rr424588 1187 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs262364705
MGI SNP Detail
Chr1:180642290 H3f3aos within coordinates of
Rr424588 1189 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs231095611
MGI SNP Detail
Chr1:180642291 H3f3aos within coordinates of
Rr424588 1190 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251592187
MGI SNP Detail
Chr1:180642361 H3f3aos within coordinates of
Rr424588 1260 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs32619510
MGI SNP Detail
Chr1:180642404 H3f3aos within coordinates of
Rr424588 1303 bp distal
SNP A/C C A C C
rs31284001
MGI SNP Detail
Chr1:180642504 Gm71014 within coordinates of
H3f3aos within coordinates of
Rr424588 1403 bp distal
SNP A/G G A G G
rs248209034
MGI SNP Detail
Chr1:180642664 Gm71014 within coordinates of
H3f3aos within coordinates of
Rr424588 1563 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs46707766
MGI SNP Detail
Chr1:180642838 Gm71014 within coordinates of
H3f3aos within coordinates of
Rr424588 1737 bp distal
SNP A/C C A
rs50087029
MGI SNP Detail
Chr1:180642931 Gm71014 within coordinates of
H3f3aos within coordinates of
Rr424588 1830 bp distal
SNP C/T T C
rs261695641
MGI SNP Detail
Chr1:180642960 Gm71014 within coordinates of
H3f3aos within coordinates of
Rr424588 1859 bp distal
SNP A/C C C C A C C C C C A C C C C C C C C C A C A A C C C C A C C C C A C C C C C C A C C C A C C A A C A C
rs46428987
MGI SNP Detail
Chr1:180643041 Gm71014 within coordinates of
H3f3aos within coordinates of
Rr424588 1940 bp distal
SNP G/T T G
rs46923609
MGI SNP Detail
Chr1:180643056 Gm71014 within coordinates of
H3f3aos within coordinates of
Rr424588 1955 bp distal
SNP A/G G A
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Showing SNP(s) 1 - 88 of 88

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory