About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID
Rr425422
regulatory region 425422
MGI:7887554

<< first < prev12 next > last >>
Showing SNP(s) 1 - 100 of 121

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs243568435
MGI SNP Detail
Chr1:185415004 Rr425422 1991 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs219507573
MGI SNP Detail
Chr1:185415034 Rr425422 1961 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32730579
MGI SNP Detail
Chr1:185415055 Rr425422 1940 bp proximal
SNP C/G G G C G C
rs47391977
MGI SNP Detail
Chr1:185415119 Rr425422 1876 bp proximal
SNP A/G G A G A
rs51528097
MGI SNP Detail
Chr1:185415182 Rr425422 1813 bp proximal
SNP C/T C T C T
rs232339483
MGI SNP Detail
Chr1:185415213 Rr425422 1782 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G T G G G G G G T G
rs242167481
MGI SNP Detail
Chr1:185415223 Rr425422 1772 bp proximal
SNP G/T G T
rs52596430
MGI SNP Detail
Chr1:185415257 Rr425422 1738 bp proximal
SNP A/G A G
rs52652433
MGI SNP Detail
Chr1:185415269 Rr425422 1726 bp proximal
SNP A/G A G A G
rs237246811
MGI SNP Detail
Chr1:185415274 Rr425422 1721 bp proximal
SNP C/T C T
rs52632797
MGI SNP Detail
Chr1:185415275 Rr425422 1720 bp proximal
SNP A/G A G
rs261009152
MGI SNP Detail
Chr1:185415281 Rr425422 1714 bp proximal
SNP T T T T T T T T T T T T T T T T T T T T T T T T
rs585076289
MGI SNP Detail
Chr1:185415287 Rr425422 1708 bp proximal
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs579348950
MGI SNP Detail
Chr1:185415289 Rr425422 1706 bp proximal
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs257834598
MGI SNP Detail
Chr1:185415293 Rr425422 1702 bp proximal
SNP A/G A G
rs581900577
MGI SNP Detail
Chr1:185415301 Rr425422 1694 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A G A A A A
rs226653882
MGI SNP Detail
Chr1:185415305 Rr425422 1690 bp proximal
SNP A/G A G
rs257591073
MGI SNP Detail
Chr1:185415313 Rr425422 1682 bp proximal
SNP A/G G A
rs52602870
MGI SNP Detail
Chr1:185415316 Rr425422 1679 bp proximal
SNP A/C A C
rs250098932
MGI SNP Detail
Chr1:185415364 Rr425422 1631 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32832720
MGI SNP Detail
Chr1:185415385 Rr425422 1610 bp proximal
SNP C/G G G G C G C G C C C
rs46571104
MGI SNP Detail
Chr1:185415432 Rr425422 1563 bp proximal
SNP C/T T C T C
rs47401648
MGI SNP Detail
Chr1:185415433 Rr425422 1562 bp proximal
SNP C/T C T C T
rs50966404
MGI SNP Detail
Chr1:185415521 Rr425422 1474 bp proximal
SNP C/T C T C T
rs241807571
MGI SNP Detail
Chr1:185415523 Rr425422 1472 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs50251706
MGI SNP Detail
Chr1:185415607 Rr425422 1388 bp proximal
SNP A/G A G A G
rs32832723
MGI SNP Detail
Chr1:185415619 Rr425422 1376 bp proximal
SNP A/G G A A A G A G G A G G G
rs239549966
MGI SNP Detail
Chr1:185415658 Rr425422 1337 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs257537033
MGI SNP Detail
Chr1:185415659 Rr425422 1336 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs218826979
MGI SNP Detail
Chr1:185415661 Rr425422 1334 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs237308485
MGI SNP Detail
Chr1:185415687 Rr425422 1308 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs266159084
MGI SNP Detail
Chr1:185415691 Rr425422 1304 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs233143824
MGI SNP Detail
Chr1:185415719 Rr425422 1276 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs258485174
MGI SNP Detail
Chr1:185415720 Rr425422 1275 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs263251735
MGI SNP Detail
Chr1:185415725 Rr425422 1270 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs49067309
MGI SNP Detail
Chr1:185415727 Rr425422 1268 bp proximal
SNP C/T T C T C
rs244066409
MGI SNP Detail
Chr1:185415771 Rr425422 1224 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G A G G G G G G G G
rs238095482
MGI SNP Detail
Chr1:185415908 Rr425422 1087 bp proximal
SNP A/T A T
rs585606325
MGI SNP Detail
Chr1:185415910 Rr425422 1085 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs52558939
MGI SNP Detail
Chr1:185415962 Rr425422 1033 bp proximal
SNP A/T A T A T
rs225634141
MGI SNP Detail
Chr1:185415996 Rr425422 999 bp proximal
SNP A/G A G
rs32833515
MGI SNP Detail
Chr1:185416010 Rr425422 985 bp proximal
SNP C/T C C C C T C C T T
rs51144406
MGI SNP Detail
Chr1:185416024 Rr425422 971 bp proximal
SNP A/C C A C A
rs32833518
MGI SNP Detail
Chr1:185416037 Rr425422 958 bp proximal
SNP C/T T T T C T C T C C C
rs263228012
MGI SNP Detail
Chr1:185416289 Rr425422 706 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs31747304
MGI SNP Detail
Chr1:185416312 Rr425422 683 bp proximal
SNP C/T C C C C C T C T C T T T
rs32706064
MGI SNP Detail
Chr1:185416352 Rr425422 643 bp proximal
SNP C/T C T T C C C
rs31029029
MGI SNP Detail
Chr1:185416487 Rr425422 508 bp proximal
SNP C/T T C T C
rs218885727
MGI SNP Detail
Chr1:185416551 Rr425422 444 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs243982405
MGI SNP Detail
Chr1:185416552 Rr425422 443 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs51179533
MGI SNP Detail
Chr1:185416568 Rr425422 427 bp proximal
SNP G G G
rs226287026
MGI SNP Detail
Chr1:185416657 Rr425422 338 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs246475512
MGI SNP Detail
Chr1:185416670 Rr425422 325 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs266208259
MGI SNP Detail
Chr1:185416675 Rr425422 320 bp proximal
SNP A/C A C
rs46331662
MGI SNP Detail
Chr1:185416716 Rr425422 279 bp proximal
SNP G G G G
rs244121661
MGI SNP Detail
Chr1:185416745 Rr425422 250 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs254863404
MGI SNP Detail
Chr1:185416746 Rr425422 249 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs254582271
MGI SNP Detail
Chr1:185416752 Rr425422 243 bp proximal
SNP T T T
rs256360350
MGI SNP Detail
Chr1:185416775 Rr425422 220 bp proximal
SNP C C C
rs578641296
MGI SNP Detail
Chr1:185416785 Rr425422 210 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs226991776
MGI SNP Detail
Chr1:185416805 Rr425422 190 bp proximal
SNP A A A
rs32833523
MGI SNP Detail
Chr1:185416814 Rr425422 181 bp proximal
SNP C/T T T T C T C C T C C C
rs32834446
MGI SNP Detail
Chr1:185416835 Rr425422 160 bp proximal
SNP C/G G G G C G C G G C C C
rs50913316
MGI SNP Detail
Chr1:185416899 Rr425422 96 bp proximal
SNP C/T C T
rs51400125
MGI SNP Detail
Chr1:185416900 Rr425422 95 bp proximal
SNP A/G A G
rs32827796
MGI SNP Detail
Chr1:185416943 Rr425422 52 bp proximal
SNP C/G C C C C G G C G G G
rs235337860
MGI SNP Detail
Chr1:185417018 Rr425422 2 bp distal
SNP A/G A G
rs32827799
MGI SNP Detail
Chr1:185417064 Rr425422 48 bp distal
SNP C/T C C C T C T T C T T T
rs212754357
MGI SNP Detail
Chr1:185417074 Rr425422 58 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs48208048
MGI SNP Detail
Chr1:185417098 Rr425422 82 bp distal
SNP A/G G A
rs264217745
MGI SNP Detail
Chr1:185417153 Rr425422 137 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225714205
MGI SNP Detail
Chr1:185417187 Rr425422 171 bp distal
Rr425423 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs249246208
MGI SNP Detail
Chr1:185417201 Rr425422 185 bp distal
Rr425423 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251289188
MGI SNP Detail
Chr1:185417239 Rr425422 223 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs220225293
MGI SNP Detail
Chr1:185417302 Rr425422 286 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs237758350
MGI SNP Detail
Chr1:185417334 Rr425422 318 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs254737100
MGI SNP Detail
Chr1:185417335 Rr425422 319 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs231407064
MGI SNP Detail
Chr1:185417350 Rr425422 334 bp distal
SNP C/T T C
rs248603892
MGI SNP Detail
Chr1:185417361 Rr425422 345 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs32827802
MGI SNP Detail
Chr1:185417376 Rr425422 360 bp distal
SNP C/T T T T C T C C T C C C
rs232707995
MGI SNP Detail
Chr1:185417494 Rr425422 478 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs257905596
MGI SNP Detail
Chr1:185417506 Rr425422 490 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs214865787
MGI SNP Detail
Chr1:185417540 Rr425422 524 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs226209385
MGI SNP Detail
Chr1:185417619 Rr425422 603 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs244801779
MGI SNP Detail
Chr1:185417629 Rr425422 613 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs220479769
MGI SNP Detail
Chr1:185417700 Rr425422 684 bp distal
SNP A/G G A
rs250873279
MGI SNP Detail
Chr1:185417805 Rr425422 789 bp distal
SNP A/G A G
rs260779098
MGI SNP Detail
Chr1:185417828 Rr425422 812 bp distal
SNP C/T T T T C T C C C T C C C C C C C C C C T C C C C C C T T C C T T C T C T C C T T C T T C C C C C T C C C C
rs218128991
MGI SNP Detail
Chr1:185417831 Rr425422 815 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs238653649
MGI SNP Detail
Chr1:185417847 Rr425422 831 bp distal
SNP A/G A A A G A G G G A G G G G G G G G G G A G G G G G G A A G A A G A G A G G A A G A A G G G G G G G G G G
rs251163934
MGI SNP Detail
Chr1:185417852 Rr425422 836 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs263902014
MGI SNP Detail
Chr1:185417854 Rr425422 838 bp distal
SNP C/T C T
rs220831542
MGI SNP Detail
Chr1:185417873 Rr425422 857 bp distal
SNP A/C A C
rs586012633
MGI SNP Detail
Chr1:185417895 Rr425422 879 bp distal
SNP A/G A A A G A G G G A G G G G G G G G G G A G G G G G G A A G G A G A G A G G A A G A A G G G G G G G G G G
rs249088049
MGI SNP Detail
Chr1:185417933 Rr425422 917 bp distal
SNP A/C C C A C A A A C A A A A A A A A A A C A A A A A A C C A C A C A C A A C C A C C A A A A A C A A A A
rs220613537
MGI SNP Detail
Chr1:185417940 Rr425422 924 bp distal
SNP C/T C C T C T T T C T T T T T T T T T T C T T T T T T C C T C T C T C T T C C T C C T T T T T C T T T T
rs251780105
MGI SNP Detail
Chr1:185417941 Rr425422 925 bp distal
SNP A/G A A G A G G G A G G G G G G G G G G A G G G G G G A A G A G A G A G G A A G A A G G G G G A G G G G
rs264155742
MGI SNP Detail
Chr1:185417942 Rr425422 926 bp distal
SNP C/T T T C T C C C T C C C C C C C C C C T C C C C C C T T C T C T C T C C T T C T T C C C C C T C C C C
rs233387540
MGI SNP Detail
Chr1:185418059 Rr425422 1043 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs579965172
MGI SNP Detail
Chr1:185418115 Rr425422 1099 bp distal
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
<< first < prev12 next > last >>
Showing SNP(s) 1 - 100 of 121

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
03/25/2025
MGI 6.24
The Jackson Laboratory

Building initial tooltip...