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Mouse SNP Summary
Symbol
Name
ID
Rr425733
regulatory region 425733
MGI:7887865

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs37113813
MGI SNP Detail
Alliance Variant
Chr1:188708494 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 1992 bp proximal
SNP A/G A A A A A A G A A A G A A A A
rs32478005
MGI SNP Detail
Alliance Variant
Chr1:188708549 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 1937 bp proximal
SNP C/T C C C C C C C C T T C C T T C T C C C
rs245284695
MGI SNP Detail
Alliance Variant
Chr1:188708571 Kctd3 Intron
Kctd3 mRNA-UTR
Kctd3 Noncoding-Transcript-Variant
Rr425733 1915 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A
rs37968707
MGI SNP Detail
Alliance Variant
Chr1:188708579 Kctd3 Intron
Kctd3 mRNA-UTR
Kctd3 Noncoding-Transcript-Variant
Rr425733 1907 bp proximal
SNP A/T A A A A A A T A A A T A A A A
rs236667428
MGI SNP Detail
Alliance Variant
Chr1:188708690 Kctd3 Intron
Kctd3 mRNA-UTR
Kctd3 Noncoding-Transcript-Variant
Rr425733 1796 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A
rs255078379
MGI SNP Detail
Alliance Variant
Chr1:188708693 Kctd3 Intron
Kctd3 mRNA-UTR
Kctd3 Noncoding-Transcript-Variant
Rr425733 1793 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A
rs217706685
MGI SNP Detail
Alliance Variant
Chr1:188708816 Kctd3 Coding-Synonymous
Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 1670 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs233322280
MGI SNP Detail
Alliance Variant
Chr1:188708828 Kctd3 Coding-Synonymous
Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 1658 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs38593211
MGI SNP Detail
Alliance Variant
Chr1:188708949 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 1537 bp proximal
SNP C/T C C C C C C T C C C T C C C C
rs219897892
MGI SNP Detail
Alliance Variant
Chr1:188709008 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 1478 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs231240916
MGI SNP Detail
Alliance Variant
Chr1:188709014 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 1472 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31881642
MGI SNP Detail
Alliance Variant
Chr1:188709025 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 1461 bp proximal
SNP A/G A A G G G G G G G G G G G G G
rs36379580
MGI SNP Detail
Alliance Variant
Chr1:188709034 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 1452 bp proximal
SNP A/G A A A A A A G A A A G A A A A
rs38115631
MGI SNP Detail
Alliance Variant
Chr1:188709065 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 1421 bp proximal
SNP G/T T T T T T T G T T T T T T T
rs264031156
MGI SNP Detail
Alliance Variant
Chr1:188709144 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 1342 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs222738227
MGI SNP Detail
Alliance Variant
Chr1:188709155 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 1331 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs241368728
MGI SNP Detail
Alliance Variant
Chr1:188709172 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 1314 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T C T T T T
rs259275145
MGI SNP Detail
Alliance Variant
Chr1:188709259 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 1227 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs226699493
MGI SNP Detail
Alliance Variant
Chr1:188709340 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 1146 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A A A A A A A A A G A A A A
rs250894254
MGI SNP Detail
Alliance Variant
Chr1:188709387 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 1099 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T
rs264920925
MGI SNP Detail
Alliance Variant
Chr1:188709547 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 939 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs228067159
MGI SNP Detail
Alliance Variant
Chr1:188709655 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 831 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs581572137
MGI SNP Detail
Alliance Variant
Chr1:188709676 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 810 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T
rs244957055
MGI SNP Detail
Alliance Variant
Chr1:188709805 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 681 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A G A A A A
rs214104464
MGI SNP Detail
Alliance Variant
Chr1:188709810 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 676 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs231185112
MGI SNP Detail
Alliance Variant
Chr1:188709846 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 640 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs256050981
MGI SNP Detail
Alliance Variant
Chr1:188709869 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 617 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C G C C C C C C C C C C C C C C G C C C C
rs212049764
MGI SNP Detail
Alliance Variant
Chr1:188709898 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 588 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C T C C C C
rs240223331
MGI SNP Detail
Alliance Variant
Chr1:188709988 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 498 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T
rs37563692
MGI SNP Detail
Alliance Variant
Chr1:188710053 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 433 bp proximal
SNP C/T T T T T T T C T T T C T T T T
rs221853704
MGI SNP Detail
Alliance Variant
Chr1:188710057 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 429 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs240520776
MGI SNP Detail
Alliance Variant
Chr1:188710127 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 359 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A A A A A A A A A A A A A A
rs578438793
MGI SNP Detail
Alliance Variant
Chr1:188710136 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 350 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252877838
MGI SNP Detail
Alliance Variant
Chr1:188710184 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 302 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220352974
MGI SNP Detail
Alliance Variant
Chr1:188710188 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 298 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs246164188
MGI SNP Detail
Alliance Variant
Chr1:188710249 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 237 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs37633897
MGI SNP Detail
Alliance Variant
Chr1:188710267 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 219 bp proximal
SNP A/G A A A A A A G A A A G A A A A
rs228597821
MGI SNP Detail
Alliance Variant
Chr1:188710278 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 208 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs248676684
MGI SNP Detail
Alliance Variant
Chr1:188710294 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 192 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs259351079
MGI SNP Detail
Alliance Variant
Chr1:188710306 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 180 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs227872495
MGI SNP Detail
Alliance Variant
Chr1:188710329 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 157 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A A A A A A A A A G A A A A
rs245612399
MGI SNP Detail
Alliance Variant
Chr1:188710365 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 121 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs214038001
MGI SNP Detail
Alliance Variant
Chr1:188710454 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 32 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A
rs32731861
MGI SNP Detail
Alliance Variant
Chr1:188710461 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 25 bp proximal
SNP C/T T T T C C T
rs253740454
MGI SNP Detail
Alliance Variant
Chr1:188710479 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 7 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs581935598
MGI SNP Detail
Alliance Variant
Chr1:188710480 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 6 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs30981381
MGI SNP Detail
Alliance Variant
Chr1:188710484 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 2 bp proximal
SNP A/G G G A G G G
rs32399853
MGI SNP Detail
Alliance Variant
Chr1:188710495 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 within coordinates of
SNP G/T T T T G G T
rs584790030
MGI SNP Detail
Alliance Variant
Chr1:188710499 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs260112180
MGI SNP Detail
Alliance Variant
Chr1:188710522 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs578633417
MGI SNP Detail
Alliance Variant
Chr1:188710586 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215804272
MGI SNP Detail
Alliance Variant
Chr1:188710630 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs233833259
MGI SNP Detail
Alliance Variant
Chr1:188710636 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs252076396
MGI SNP Detail
Alliance Variant
Chr1:188710649 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A A A A A A A A A A A A A C A A A A
rs220338303
MGI SNP Detail
Alliance Variant
Chr1:188710654 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs243271679
MGI SNP Detail
Alliance Variant
Chr1:188710664 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T
rs261648502
MGI SNP Detail
Alliance Variant
Chr1:188710671 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T
rs36391207
MGI SNP Detail
Alliance Variant
Chr1:188710788 Kctd3 Coding-Synonymous
Kctd3 Noncoding-Transcript-Variant
Rr425733 116 bp distal
SNP A/G A A A A A G A A A G A A A A
rs36887202
MGI SNP Detail
Alliance Variant
Chr1:188710858 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 186 bp distal
SNP A/G G G G G G G A G G G A G G G G
rs259289034
MGI SNP Detail
Alliance Variant
Chr1:188710870 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 198 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs227824960
MGI SNP Detail
Alliance Variant
Chr1:188710886 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 214 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs239595523
MGI SNP Detail
Alliance Variant
Chr1:188710898 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 226 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs36724977
MGI SNP Detail
Alliance Variant
Chr1:188710922 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 250 bp distal
SNP A/G A A A A A A G A A A G A A A A
rs229779595
MGI SNP Detail
Alliance Variant
Chr1:188710934 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 262 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249592195
MGI SNP Detail
Alliance Variant
Chr1:188710939 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 267 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs211804175
MGI SNP Detail
Alliance Variant
Chr1:188710958 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 286 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs585739688
MGI SNP Detail
Alliance Variant
Chr1:188711001 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 329 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs580050050
MGI SNP Detail
Alliance Variant
Chr1:188711004 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 332 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs582638835
MGI SNP Detail
Alliance Variant
Chr1:188711022 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 350 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs586207525
MGI SNP Detail
Alliance Variant
Chr1:188711042 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 370 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs247794356
MGI SNP Detail
Alliance Variant
Chr1:188711066 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 394 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs215746279
MGI SNP Detail
Alliance Variant
Chr1:188711097 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 425 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T
rs233813287
MGI SNP Detail
Alliance Variant
Chr1:188711221 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 549 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245698518
MGI SNP Detail
Alliance Variant
Chr1:188711252 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 580 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A C A A A A A A A A A A A A A A C A A A A
rs213651721
MGI SNP Detail
Alliance Variant
Chr1:188711257 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 585 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs46414026
MGI SNP Detail
Alliance Variant
Chr1:188711296 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 624 bp distal
SNP G/T T G
rs256318931
MGI SNP Detail
Alliance Variant
Chr1:188711300 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 628 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs579766308
MGI SNP Detail
Alliance Variant
Chr1:188711328 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 656 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220223623
MGI SNP Detail
Alliance Variant
Chr1:188711347 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 675 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C
rs240450109
MGI SNP Detail
Alliance Variant
Chr1:188711425 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 753 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs252780176
MGI SNP Detail
Alliance Variant
Chr1:188711429 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 757 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G A G G G G
rs221615297
MGI SNP Detail
Alliance Variant
Chr1:188711438 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 766 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A
rs239532427
MGI SNP Detail
Alliance Variant
Chr1:188711523 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 851 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256717196
MGI SNP Detail
Alliance Variant
Chr1:188711595 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 923 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A C A A A A A A A A A A A A A A C A A A A
rs222899914
MGI SNP Detail
Alliance Variant
Chr1:188711788 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 1116 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs245484240
MGI SNP Detail
Alliance Variant
Chr1:188711821 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 1149 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs261221266
MGI SNP Detail
Alliance Variant
Chr1:188711947 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 1275 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G
rs234599639
MGI SNP Detail
Alliance Variant
Chr1:188711962 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 1290 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T
rs247776822
MGI SNP Detail
Alliance Variant
Chr1:188712143 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 1471 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs36853951
MGI SNP Detail
Alliance Variant
Chr1:188712152 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 1480 bp distal
SNP A/T T T T T T T A T T T A T T T
rs227206400
MGI SNP Detail
Alliance Variant
Chr1:188712188 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 1516 bp distal
Rr425734 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs36257456
MGI SNP Detail
Alliance Variant
Chr1:188712206 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 1534 bp distal
Rr425734 within coordinates of
SNP A/T A A A A A A T A A A T A A A A
rs38130941
MGI SNP Detail
Alliance Variant
Chr1:188712257 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 1585 bp distal
Rr425734 within coordinates of
SNP G/T T T T T T T G T T T T T T T
rs36951107
MGI SNP Detail
Alliance Variant
Chr1:188712300 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 1628 bp distal
Rr425734 within coordinates of
SNP C/T T T T T T T C T T T C T T T T
rs252545802
MGI SNP Detail
Alliance Variant
Chr1:188712301 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 1629 bp distal
Rr425734 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs36653807
MGI SNP Detail
Alliance Variant
Chr1:188712318 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 1646 bp distal
Rr425734 within coordinates of
SNP A/G A A A A A A G A A A G A A A A
rs38109501
MGI SNP Detail
Alliance Variant
Chr1:188712394 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 1722 bp distal
Rr425734 within coordinates of
SNP C/G C C C C C C G C C C G C C C C
rs583135305
MGI SNP Detail
Alliance Variant
Chr1:188712462 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 1790 bp distal
Rr425734 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs36593439
MGI SNP Detail
Alliance Variant
Chr1:188712481 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 1809 bp distal
Rr425734 within coordinates of
SNP C/T T T T T T T C T T C T T T T
rs38844260
MGI SNP Detail
Alliance Variant
Chr1:188712485 Kctd3 Intron
Kctd3 Noncoding-Transcript-Variant
Rr425733 1813 bp distal
Rr425734 within coordinates of
SNP C/G C C C C C C C G C C G C C G C C C
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Showing SNP(s) 1 - 100 of 104

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory