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Mouse SNP Summary
Symbol
Name
ID
Rr425817
regulatory region 425817
MGI:7887949

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Showing SNP(s) 1 - 55 of 55

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs228336688
MGI SNP Detail
Alliance Variant
Chr1:189392347 Cenpf Intron
Gm70084 within coordinates of
Rr425817 1906 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs246759697
MGI SNP Detail
Alliance Variant
Chr1:189392436 Cenpf Intron
Gm70084 within coordinates of
Rr425817 1817 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs262927575
MGI SNP Detail
Alliance Variant
Chr1:189392438 Cenpf Intron
Gm70084 within coordinates of
Rr425817 1815 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T T T T T T T T T T T G T T T T
rs229910802
MGI SNP Detail
Alliance Variant
Chr1:189392457 Cenpf Intron
Gm70084 within coordinates of
Rr425817 1796 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A A A A A A A A A A A A
rs249688313
MGI SNP Detail
Alliance Variant
Chr1:189392544 Cenpf Intron
Gm70084 within coordinates of
Rr425817 1709 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs211714090
MGI SNP Detail
Alliance Variant
Chr1:189392633 Cenpf Intron
Gm70084 within coordinates of
Rr425817 1620 bp proximal
SNP A/G G A G G G A A G G G G G G G G A G A G G A G G G A A G G G G G G G G A G G A G G G G G G G G G G G
rs234860089
MGI SNP Detail
Alliance Variant
Chr1:189392724 Cenpf Intron
Gm70084 within coordinates of
Rr425817 1529 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246453282
MGI SNP Detail
Alliance Variant
Chr1:189392726 Cenpf Intron
Gm70084 within coordinates of
Rr425817 1527 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215895053
MGI SNP Detail
Alliance Variant
Chr1:189392736 Cenpf Intron
Gm70084 within coordinates of
Rr425817 1517 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G G G G G G G G G G G G G G G G G G G G
rs586300665
MGI SNP Detail
Alliance Variant
Chr1:189392811 Cenpf Intron
Gm70084 within coordinates of
Rr425817 1442 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs580715009
MGI SNP Detail
Alliance Variant
Chr1:189392818 Cenpf Intron
Gm70084 within coordinates of
Rr425817 1435 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs232862092
MGI SNP Detail
Alliance Variant
Chr1:189392856 Cenpf Intron
Gm70084 within coordinates of
Rr425817 1397 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C C C C C C C C C C C C C C
rs33011145
MGI SNP Detail
Alliance Variant
Chr1:189392893 Cenpf Intron
Gm70084 within coordinates of
Rr425817 1360 bp proximal
SNP A/T T T T T T T T T T A T T T A A
rs222475723
MGI SNP Detail
Alliance Variant
Chr1:189392970 Cenpf Intron
Gm70084 within coordinates of
Rr425817 1283 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238254929
MGI SNP Detail
Alliance Variant
Chr1:189392989 Cenpf Intron
Gm70084 within coordinates of
Rr425817 1264 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256468086
MGI SNP Detail
Alliance Variant
Chr1:189393133 Cenpf Intron
Gm70084 within coordinates of
Rr425817 1120 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs33011148
MGI SNP Detail
Alliance Variant
Chr1:189393139 Cenpf Intron
Gm70084 within coordinates of
Rr425817 1114 bp proximal
SNP C/T C C C C C C C C C T C C C T T
rs242831714
MGI SNP Detail
Alliance Variant
Chr1:189393166 Cenpf Intron
Gm70084 within coordinates of
Rr425817 1087 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs254537431
MGI SNP Detail
Alliance Variant
Chr1:189393180 Cenpf Intron
Gm70084 within coordinates of
Rr425817 1073 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs33011150
MGI SNP Detail
Alliance Variant
Chr1:189393232 Cenpf Intron
Gm70084 within coordinates of
Rr425817 1021 bp proximal
SNP A/G A A A A A A G A A A G A A A A
rs245846727
MGI SNP Detail
Alliance Variant
Chr1:189393237 Cenpf Intron
Gm70084 within coordinates of
Rr425817 1016 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs33011153
MGI SNP Detail
Alliance Variant
Chr1:189393324 Cenpf Intron
Gm70084 within coordinates of
Rr425817 929 bp proximal
SNP C/T T T T T T T T T T C T T T T
rs230358677
MGI SNP Detail
Alliance Variant
Chr1:189393336 Cenpf Intron
Gm70084 within coordinates of
Rr425817 917 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs33011886
MGI SNP Detail
Alliance Variant
Chr1:189393348 Cenpf Intron
Gm70084 within coordinates of
Rr425817 905 bp proximal
SNP A/G G G G G G G A G G G A G G G G
rs261325523
MGI SNP Detail
Alliance Variant
Chr1:189393359 Cenpf Intron
Gm70084 within coordinates of
Rr425817 894 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs229067963
MGI SNP Detail
Alliance Variant
Chr1:189393412 Cenpf Intron
Gm70084 within coordinates of
Rr425817 841 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs246391425
MGI SNP Detail
Alliance Variant
Chr1:189393417 Cenpf Intron
Gm70084 within coordinates of
Rr425817 836 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs33011888
MGI SNP Detail
Alliance Variant
Chr1:189393470 Cenpf Intron
Gm70084 within coordinates of
Rr425817 783 bp proximal
SNP A/T T T T T T T A T T T A T T T T
rs226800325
MGI SNP Detail
Alliance Variant
Chr1:189393593 Cenpf Intron
Gm70084 within coordinates of
Rr425817 660 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T T C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs251506749
MGI SNP Detail
Alliance Variant
Chr1:189393617 Cenpf Intron
Gm70084 within coordinates of
Rr425817 636 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs33011891
MGI SNP Detail
Alliance Variant
Chr1:189393699 Cenpf Intron
Gm70084 within coordinates of
Rr425817 554 bp proximal
SNP C/T T T T T T T T T T T T T T T C
rs33012704
MGI SNP Detail
Alliance Variant
Chr1:189393954 Cenpf Intron
Gm70084 within coordinates of
Rr425817 299 bp proximal
SNP C/T T T T T T T C T T T C T T T T
rs260825373
MGI SNP Detail
Alliance Variant
Chr1:189393956 Cenpf Intron
Gm70084 within coordinates of
Rr425817 297 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212231118
MGI SNP Detail
Alliance Variant
Chr1:189393957 Cenpf Intron
Gm70084 within coordinates of
Rr425817 296 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs236601093
MGI SNP Detail
Alliance Variant
Chr1:189394044 Cenpf Intron
Gm70084 within coordinates of
Rr425817 209 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A A A A A A A A A G A A A A
rs254462376
MGI SNP Detail
Alliance Variant
Chr1:189394195 Cenpf Coding-Synonymous
Cenpf Splice-Site
Gm70084 within coordinates of
Rr425816 within coordinates of
Rr425817 58 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221970878
MGI SNP Detail
Alliance Variant
Chr1:189394196 Cenpf Coding-NonSynonymous
Cenpf Splice-Site
Gm70084 within coordinates of
Rr425816 within coordinates of
Rr425817 57 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs248349514
MGI SNP Detail
Alliance Variant
Chr1:189394532 Cenpf Intron
Gm70084 within coordinates of
Rr425817 258 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32704317
MGI SNP Detail
Chr1:189394588 Cenpf within coordinates of
Gm70084 within coordinates of
Rr425817 314 bp distal
SNP A/C/G/T ? T A ?
rs258233433
MGI SNP Detail
Alliance Variant
Chr1:189394672 Cenpf Intron
Gm70084 within coordinates of
Rr425817 398 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs222407684
MGI SNP Detail
Alliance Variant
Chr1:189394678 Cenpf Intron
Gm70084 within coordinates of
Rr425817 404 bp distal
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs242497856
MGI SNP Detail
Alliance Variant
Chr1:189394679 Cenpf Intron
Gm70084 within coordinates of
Rr425817 405 bp distal
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs254184075
MGI SNP Detail
Alliance Variant
Chr1:189394680 Cenpf Intron
Gm70084 within coordinates of
Rr425817 406 bp distal
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs33012707
MGI SNP Detail
Alliance Variant
Chr1:189394989 Cenpf Intron
Gm70084 within coordinates of
Rr425817 715 bp distal
SNP G/T G G G G G G T G G G T G G G G
rs33012710
MGI SNP Detail
Alliance Variant
Chr1:189395190 Cenpf Intron
Gm70084 within coordinates of
Rr425817 916 bp distal
SNP C/T T T T T T T C T T C C T T C C
rs257716834
MGI SNP Detail
Alliance Variant
Chr1:189395235 Cenpf Intron
Gm70084 within coordinates of
Rr425817 961 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs231369643
MGI SNP Detail
Alliance Variant
Chr1:189395487 Cenpf Intron
Gm70084 within coordinates of
Rr425817 1213 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C C C C C C C C C C C C C C
rs256192601
MGI SNP Detail
Alliance Variant
Chr1:189395488 Cenpf Intron
Gm70084 within coordinates of
Rr425817 1214 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C C C C C C C C C C C C C C
rs213725209
MGI SNP Detail
Alliance Variant
Chr1:189395495 Cenpf Intron
Gm70084 within coordinates of
Rr425817 1221 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C C C C C C C C C T C C C C
rs33012713
MGI SNP Detail
Alliance Variant
Chr1:189395697 Cenpf Intron
Gm70084 within coordinates of
Rr425817 1423 bp distal
Rr425818 within coordinates of
SNP A/G A A A A A A G G A G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs31607772
MGI SNP Detail
Alliance Variant
Chr1:189395764 Cenpf Intron
Gm70084 within coordinates of
Rr425817 1490 bp distal
Rr425818 within coordinates of
SNP A/G G G G G A
rs217315227
MGI SNP Detail
Alliance Variant
Chr1:189395842 Cenpf Intron
Gm70084 within coordinates of
Rr425817 1568 bp distal
Rr425818 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs236538035
MGI SNP Detail
Alliance Variant
Chr1:189395958 Cenpf Intron
Gm70084 within coordinates of
Rr425817 1684 bp distal
Rr425818 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs254618806
MGI SNP Detail
Alliance Variant
Chr1:189395962 Cenpf Intron
Gm70084 within coordinates of
Rr425817 1688 bp distal
Rr425818 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs33013496
MGI SNP Detail
Alliance Variant
Chr1:189396067 Cenpf Intron
Gm70084 within coordinates of
Rr425817 1793 bp distal
SNP A/G G G G G G G A G G G A G G G G
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Showing SNP(s) 1 - 55 of 55

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last database update
07/29/2025
MGI 6.24
The Jackson Laboratory