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Mouse SNP Summary
Symbol
Name
ID
Rr425818
regulatory region 425818
MGI:7887950

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Showing SNP(s) 1 - 60 of 60

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs33011891
MGI SNP Detail
Alliance Variant
Chr1:189393699 Cenpf Intron
Gm70084 within coordinates of
Rr425818 1978 bp proximal
SNP C/T T T T T T T T T T T T T T T C
rs33012704
MGI SNP Detail
Alliance Variant
Chr1:189393954 Cenpf Intron
Gm70084 within coordinates of
Rr425818 1723 bp proximal
SNP C/T T T T T T T C T T T C T T T T
rs260825373
MGI SNP Detail
Alliance Variant
Chr1:189393956 Cenpf Intron
Gm70084 within coordinates of
Rr425818 1721 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212231118
MGI SNP Detail
Alliance Variant
Chr1:189393957 Cenpf Intron
Gm70084 within coordinates of
Rr425818 1720 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs236601093
MGI SNP Detail
Alliance Variant
Chr1:189394044 Cenpf Intron
Gm70084 within coordinates of
Rr425818 1633 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A A A A A A A A A G A A A A
rs254462376
MGI SNP Detail
Alliance Variant
Chr1:189394195 Cenpf Coding-Synonymous
Cenpf Splice-Site
Gm70084 within coordinates of
Rr425816 within coordinates of
Rr425818 1482 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221970878
MGI SNP Detail
Alliance Variant
Chr1:189394196 Cenpf Coding-NonSynonymous
Cenpf Splice-Site
Gm70084 within coordinates of
Rr425816 within coordinates of
Rr425818 1481 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs248349514
MGI SNP Detail
Alliance Variant
Chr1:189394532 Cenpf Intron
Gm70084 within coordinates of
Rr425818 1145 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32704317
MGI SNP Detail
Chr1:189394588 Cenpf within coordinates of
Gm70084 within coordinates of
Rr425818 1089 bp proximal
SNP A/C/G/T ? T A ?
rs258233433
MGI SNP Detail
Alliance Variant
Chr1:189394672 Cenpf Intron
Gm70084 within coordinates of
Rr425818 1005 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs222407684
MGI SNP Detail
Alliance Variant
Chr1:189394678 Cenpf Intron
Gm70084 within coordinates of
Rr425818 999 bp proximal
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs242497856
MGI SNP Detail
Alliance Variant
Chr1:189394679 Cenpf Intron
Gm70084 within coordinates of
Rr425818 998 bp proximal
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs254184075
MGI SNP Detail
Alliance Variant
Chr1:189394680 Cenpf Intron
Gm70084 within coordinates of
Rr425818 997 bp proximal
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs33012707
MGI SNP Detail
Alliance Variant
Chr1:189394989 Cenpf Intron
Gm70084 within coordinates of
Rr425818 688 bp proximal
SNP G/T G G G G G G T G G G T G G G G
rs33012710
MGI SNP Detail
Alliance Variant
Chr1:189395190 Cenpf Intron
Gm70084 within coordinates of
Rr425818 487 bp proximal
SNP C/T T T T T T T C T T C C T T C C
rs257716834
MGI SNP Detail
Alliance Variant
Chr1:189395235 Cenpf Intron
Gm70084 within coordinates of
Rr425818 442 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs231369643
MGI SNP Detail
Alliance Variant
Chr1:189395487 Cenpf Intron
Gm70084 within coordinates of
Rr425818 190 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C C C C C C C C C C C C C C
rs256192601
MGI SNP Detail
Alliance Variant
Chr1:189395488 Cenpf Intron
Gm70084 within coordinates of
Rr425818 189 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C C C C C C C C C C C C C C
rs213725209
MGI SNP Detail
Alliance Variant
Chr1:189395495 Cenpf Intron
Gm70084 within coordinates of
Rr425818 182 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C C C C C C C C C T C C C C
rs33012713
MGI SNP Detail
Alliance Variant
Chr1:189395697 Cenpf Intron
Gm70084 within coordinates of
Rr425818 within coordinates of
SNP A/G A A A A A A G G A G G
rs31607772
MGI SNP Detail
Alliance Variant
Chr1:189395764 Cenpf Intron
Gm70084 within coordinates of
Rr425818 within coordinates of
SNP A/G G G G G A
rs217315227
MGI SNP Detail
Alliance Variant
Chr1:189395842 Cenpf Intron
Gm70084 within coordinates of
Rr425818 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs236538035
MGI SNP Detail
Alliance Variant
Chr1:189395958 Cenpf Intron
Gm70084 within coordinates of
Rr425818 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs254618806
MGI SNP Detail
Alliance Variant
Chr1:189395962 Cenpf Intron
Gm70084 within coordinates of
Rr425818 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs33013496
MGI SNP Detail
Alliance Variant
Chr1:189396067 Cenpf Intron
Gm70084 within coordinates of
Rr425818 7 bp distal
SNP A/G G G G G G G A G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs237959857
MGI SNP Detail
Alliance Variant
Chr1:189396300 Cenpf Intron
Gm70084 within coordinates of
Rr425818 240 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs262513892
MGI SNP Detail
Alliance Variant
Chr1:189396349 Cenpf Intron
Gm70084 within coordinates of
Rr425818 289 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs33007465
MGI SNP Detail
Alliance Variant
Chr1:189396429 Cenpf Intron
Gm70084 within coordinates of
Rr425818 369 bp distal
SNP A/G G G G G G G G G G A G G G G
rs237555519
MGI SNP Detail
Alliance Variant
Chr1:189396453 Cenpf Intron
Gm70084 within coordinates of
Rr425818 393 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G G G G G G G G G G G G G G
rs584721429
MGI SNP Detail
Alliance Variant
Chr1:189396460 Cenpf Intron
Gm70084 within coordinates of
Rr425818 400 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs33007468
MGI SNP Detail
Alliance Variant
Chr1:189396565 Cenpf Intron
Gm70084 within coordinates of
Rr425818 505 bp distal
SNP C/T C C C C C C T C C C T C C C C
rs223003534
MGI SNP Detail
Alliance Variant
Chr1:189396596 Cenpf Intron
Gm70084 within coordinates of
Rr425818 536 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T T T T T T T T T C T T T T
rs240574979
MGI SNP Detail
Alliance Variant
Chr1:189396598 Cenpf Intron
Gm70084 within coordinates of
Rr425818 538 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33007471
MGI SNP Detail
Alliance Variant
Chr1:189396626 Cenpf Intron
Gm70084 within coordinates of
Rr425818 566 bp distal
SNP C/G G G G G G G C G G G C G G G G
rs223980119
MGI SNP Detail
Alliance Variant
Chr1:189396638 Cenpf Intron
Gm70084 within coordinates of
Rr425818 578 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33008224
MGI SNP Detail
Alliance Variant
Chr1:189396672 Cenpf Intron
Gm70084 within coordinates of
Rr425818 612 bp distal
SNP A/G G G G G G G A G G G A G G G G
rs33008227
MGI SNP Detail
Alliance Variant
Chr1:189396689 Cenpf Intron
Gm70084 within coordinates of
Rr425818 629 bp distal
SNP G/T T T T T T T G T T T T T T T T
rs228695583
MGI SNP Detail
Alliance Variant
Chr1:189396872 Cenpf Intron
Gm70084 within coordinates of
Rr425818 812 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs33008230
MGI SNP Detail
Alliance Variant
Chr1:189396921 Cenpf Intron
Gm70084 within coordinates of
Rr425818 861 bp distal
SNP C/G C C C C C C G C C C G C C C C
rs261145482
MGI SNP Detail
Alliance Variant
Chr1:189396935 Cenpf Intron
Gm70084 within coordinates of
Rr425818 875 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs33008233
MGI SNP Detail
Alliance Variant
Chr1:189396940 Cenpf Intron
Gm70084 within coordinates of
Rr425818 880 bp distal
SNP A/C A A A A A A C A A A C A A A A
rs248135275
MGI SNP Detail
Alliance Variant
Chr1:189396986 Cenpf Intron
Gm70084 within coordinates of
Rr425818 926 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs216075412
MGI SNP Detail
Alliance Variant
Chr1:189397003 Cenpf Intron
Gm70084 within coordinates of
Rr425818 943 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs240233226
MGI SNP Detail
Alliance Variant
Chr1:189397013 Cenpf Intron
Gm70084 within coordinates of
Rr425818 953 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs251568381
MGI SNP Detail
Alliance Variant
Chr1:189397018 Cenpf Intron
Gm70084 within coordinates of
Rr425818 958 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs578682201
MGI SNP Detail
Alliance Variant
Chr1:189397030 Cenpf Intron
Gm70084 within coordinates of
Rr425818 970 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A A A A A A A A A A A A A A
rs214313565
MGI SNP Detail
Alliance Variant
Chr1:189397041 Cenpf Intron
Gm70084 within coordinates of
Rr425818 981 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C G C
rs235747769
MGI SNP Detail
Alliance Variant
Chr1:189397050 Cenpf Intron
Gm70084 within coordinates of
Rr425818 990 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs248540049
MGI SNP Detail
Alliance Variant
Chr1:189397052 Cenpf Intron
Gm70084 within coordinates of
Rr425818 992 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33008966
MGI SNP Detail
Alliance Variant
Chr1:189397090 Cenpf Intron
Gm70084 within coordinates of
Rr425818 1030 bp distal
SNP A/G A A A A A A G A A A G A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs234644118
MGI SNP Detail
Alliance Variant
Chr1:189397113 Cenpf Intron
Gm70084 within coordinates of
Rr425818 1053 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs252230878
MGI SNP Detail
Alliance Variant
Chr1:189397114 Cenpf Intron
Gm70084 within coordinates of
Rr425818 1054 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs223973367
MGI SNP Detail
Alliance Variant
Chr1:189397167 Cenpf Intron
Gm70084 within coordinates of
Rr425818 1107 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs246636639
MGI SNP Detail
Alliance Variant
Chr1:189397172 Cenpf Intron
Gm70084 within coordinates of
Rr425818 1112 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs262188773
MGI SNP Detail
Alliance Variant
Chr1:189397213 Cenpf Intron
Gm70084 within coordinates of
Rr425818 1153 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220689927
MGI SNP Detail
Alliance Variant
Chr1:189397796 Cenpf Intron
Gm70084 within coordinates of
Rr425818 1736 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237129282
MGI SNP Detail
Alliance Variant
Chr1:189397846 Cenpf Intron
Gm70084 within coordinates of
Rr425818 1786 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs261252485
MGI SNP Detail
Alliance Variant
Chr1:189397927 Cenpf Intron
Gm70084 within coordinates of
Rr425818 1867 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs228556668
MGI SNP Detail
Alliance Variant
Chr1:189397961 Cenpf Intron
Gm70084 within coordinates of
Rr425818 1901 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs247129902
MGI SNP Detail
Alliance Variant
Chr1:189397962 Cenpf Intron
Gm70084 within coordinates of
Rr425818 1902 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
<< first < prev1 next > last >>
Showing SNP(s) 1 - 60 of 60

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory

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