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Mouse SNP Summary
Symbol
Name
ID
Rr425901
regulatory region 425901
MGI:7888033

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs32526001
MGI SNP Detail
Chr1:189771708 Gm39736 within coordinates of
Rr425901 1985 bp proximal
SNP G/T G T G T G
rs238375777
MGI SNP Detail
Chr1:189771724 Gm39736 within coordinates of
Rr425901 1969 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A T T T T T T T T T T T T T T T T T T T
rs256588194
MGI SNP Detail
Chr1:189771787 Gm39736 within coordinates of
Rr425901 1906 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs219781958
MGI SNP Detail
Chr1:189771902 Gm39736 within coordinates of
Rr425901 1791 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A A A A A A A A A G A A A A
rs240110249
MGI SNP Detail
Chr1:189772002 Gm39736 within coordinates of
Rr425901 1691 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252368352
MGI SNP Detail
Chr1:189772064 Gm39736 within coordinates of
Rr425901 1629 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33038574
MGI SNP Detail
Chr1:189772302 Gm39736 within coordinates of
Rr425901 1391 bp proximal
SNP A/G G G A G G G
rs238873015
MGI SNP Detail
Chr1:189772335 Gm39736 within coordinates of
Rr425901 1358 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs250417108
MGI SNP Detail
Chr1:189772336 Gm39736 within coordinates of
Rr425901 1357 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs219370471
MGI SNP Detail
Chr1:189772353 Gm39736 within coordinates of
Rr425901 1340 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs244833764
MGI SNP Detail
Chr1:189772367 Gm39736 within coordinates of
Rr425901 1326 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C
rs584351373
MGI SNP Detail
Chr1:189772383 Gm39736 within coordinates of
Rr425901 1310 bp proximal
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs586236322
MGI SNP Detail
Chr1:189772389 Gm39736 within coordinates of
Rr425901 1304 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261430978
MGI SNP Detail
Chr1:189772444 Gm39736 within coordinates of
Rr425901 1249 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G G G G G G G G G A G G G G
rs228424485
MGI SNP Detail
Chr1:189772466 Gm39736 within coordinates of
Rr425901 1227 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs248577191
MGI SNP Detail
Chr1:189772514 Gm39736 within coordinates of
Rr425901 1179 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs31597400
MGI SNP Detail
Chr1:189772606 Gm39736 within coordinates of
Rr425901 1087 bp proximal
SNP A/G G A G G A G G A A A
rs228112880
MGI SNP Detail
Chr1:189772646 Gm39736 within coordinates of
Rr425901 1047 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T T T T T T T T T C T T T T
rs246569612
MGI SNP Detail
Chr1:189772656 Gm39736 within coordinates of
Rr425901 1037 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs32130430
MGI SNP Detail
Chr1:189772657 Gm39736 within coordinates of
Rr425901 1036 bp proximal
SNP C/T C T C T C
rs230506797
MGI SNP Detail
Chr1:189772665 Gm39736 within coordinates of
Rr425901 1028 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs31080021
MGI SNP Detail
Chr1:189772759 Gm39736 within coordinates of
Rr425901 934 bp proximal
SNP G/T T G T G
rs212340277
MGI SNP Detail
Chr1:189772763 Gm39736 within coordinates of
Rr425901 930 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs581155896
MGI SNP Detail
Chr1:189772786 Gm39736 within coordinates of
Rr425901 907 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs242770232
MGI SNP Detail
Chr1:189772855 Gm39736 within coordinates of
Rr425901 838 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs32026248
MGI SNP Detail
Chr1:189772893 Gm39736 within coordinates of
Rr425901 800 bp proximal
SNP C/T T C T C
rs215715508
MGI SNP Detail
Chr1:189772904 Gm39736 within coordinates of
Rr425901 789 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs232539308
MGI SNP Detail
Chr1:189772970 Gm39736 within coordinates of
Rr425901 723 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T T T T T T T T T C T T T T
rs33038579
MGI SNP Detail
Chr1:189772983 Gm39736 within coordinates of
Rr425901 710 bp proximal
SNP A/G A A G A A
rs222058403
MGI SNP Detail
Chr1:189772989 Gm39736 within coordinates of
Rr425901 704 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242192569
MGI SNP Detail
Chr1:189773273 Gm39736 within coordinates of
Rr425901 420 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs33038581
MGI SNP Detail
Chr1:189773345 Gm39736 within coordinates of
Rr425901 348 bp proximal
SNP A/G G G A G G
rs226608561
MGI SNP Detail
Chr1:189773375 Gm39736 within coordinates of
Rr425901 318 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs33039444
MGI SNP Detail
Chr1:189773647 Gm39736 within coordinates of
Rr425901 46 bp proximal
SNP A/T A A A T A A
rs260740528
MGI SNP Detail
Chr1:189773674 Gm39736 within coordinates of
Rr425901 19 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs584643582
MGI SNP Detail
Chr1:189773719 Gm39736 within coordinates of
Rr425901 5 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs228209894
MGI SNP Detail
Chr1:189773755 Gm39736 within coordinates of
Rr425901 41 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs240565364
MGI SNP Detail
Chr1:189773782 Gm39736 within coordinates of
Rr425901 68 bp distal
SNP G/T G G G G G T T T G G G T T T T T T G G T G G G T T G G T G G G G G T T T T T G G G G G T G G T G
rs578567150
MGI SNP Detail
Chr1:189773790 Gm39736 within coordinates of
Rr425901 76 bp distal
SNP A/C A A A A C A A A A A A A A A A A A A A A A A A A A C A A A A A C C A A A A A A C A C A A A A A A A A
rs582612165
MGI SNP Detail
Chr1:189773815 Gm39736 within coordinates of
Rr425901 101 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A T A A A A A T A A A A A A A A
rs228370752
MGI SNP Detail
Chr1:189773882 Gm39736 within coordinates of
Rr425901 168 bp distal
SNP A/G G A
rs584858309
MGI SNP Detail
Chr1:189773971 Gm39736 within coordinates of
Rr425901 257 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258440544
MGI SNP Detail
Chr1:189774055 Gm39736 within coordinates of
Rr425901 341 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs230666811
MGI SNP Detail
Chr1:189774447 Gm39736 within coordinates of
Rr425901 733 bp distal
Rr425902 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs48888988
MGI SNP Detail
Chr1:189774487 Gm39736 within coordinates of
Rr425901 773 bp distal
Rr425902 within coordinates of
SNP A/G G A
rs212729887
MGI SNP Detail
Chr1:189774519 Gm39736 within coordinates of
Rr425901 805 bp distal
Rr425902 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs234085669
MGI SNP Detail
Chr1:189774622 Gm39736 within coordinates of
Rr425901 908 bp distal
Rr425902 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246971016
MGI SNP Detail
Chr1:189774660 Gm39736 within coordinates of
Rr425901 946 bp distal
Rr425902 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A A A A A A A A A A A A A A
rs215680011
MGI SNP Detail
Chr1:189774665 Gm39736 within coordinates of
Rr425901 951 bp distal
Rr425902 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A A A A A A A A A G A A A A
rs232683032
MGI SNP Detail
Chr1:189774703 Gm39736 within coordinates of
Rr425901 989 bp distal
Rr425903 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs244253193
MGI SNP Detail
Chr1:189774807 Gm39736 within coordinates of
Rr425901 1093 bp distal
Rr425903 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G G G G G G G G G G G C G G G G
rs213410052
MGI SNP Detail
Chr1:189774848 Gm39736 within coordinates of
Rr425901 1134 bp distal
Rr425903 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G G G G G G G G G G G C G G G G
rs237234221
MGI SNP Detail
Chr1:189774910 Gm39736 within coordinates of
Rr425901 1196 bp distal
Rr425903 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T T T T T T T T T T T T T G T T T T
rs255436757
MGI SNP Detail
Chr1:189774922 Gm39736 within coordinates of
Rr425901 1208 bp distal
Rr425903 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227133381
MGI SNP Detail
Chr1:189774925 Gm39736 within coordinates of
Rr425901 1211 bp distal
Rr425903 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C T C C C C C C C C C C C C C C C C C C C
rs235408363
MGI SNP Detail
Chr1:189774927 Gm39736 within coordinates of
Rr425901 1213 bp distal
Rr425903 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs253510398
MGI SNP Detail
Chr1:189774935 Gm39736 within coordinates of
Rr425901 1221 bp distal
Rr425903 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G A G G G G G G G G G G G G G G G G G G G
rs222033566
MGI SNP Detail
Chr1:189774995 Gm39736 within coordinates of
Rr425901 1281 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs240720413
MGI SNP Detail
Chr1:189775025 Gm39736 within coordinates of
Rr425901 1311 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C A C C C C C C C C C C C C C C A C C C C
rs265303570
MGI SNP Detail
Chr1:189775053 Gm39736 within coordinates of
Rr425901 1339 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A A A A A A A A A G A A A A
rs222604390
MGI SNP Detail
Chr1:189775238 Gm39736 within coordinates of
Rr425901 1524 bp distal
SNP C/T T T T T C T T T T T T T T T T T T T T C T T C T T T T C C T T T T C C C T T T T T T C T C T T T C T T T T
rs245115169
MGI SNP Detail
Chr1:189775249 Gm39736 within coordinates of
Rr425901 1535 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs261714992
MGI SNP Detail
Chr1:189775293 Gm39736 within coordinates of
Rr425901 1579 bp distal
SNP C/T C C C C T C C C C C C C C C C C C C C C C C C C C C C C T C C C C C T T C C C C C C T C T C C C C C C C C
rs33039447
MGI SNP Detail
Chr1:189775332 Gm39736 within coordinates of
Rr425901 1618 bp distal
SNP A/G A G A A
rs246933379
MGI SNP Detail
Chr1:189775419 Gm39736 within coordinates of
Rr425901 1705 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32686883
MGI SNP Detail
Chr1:189775454 Gm39736 within coordinates of
Rr425901 1740 bp distal
SNP A/C A C A C A
rs226628043
MGI SNP Detail
Chr1:189775457 Gm39736 within coordinates of
Rr425901 1743 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C C C C C C C C C T C C C C
rs31936979
MGI SNP Detail
Chr1:189775494 Gm39736 within coordinates of
Rr425901 1780 bp distal
SNP C/T C T C T C
rs213945287
MGI SNP Detail
Chr1:189775577 Gm39736 within coordinates of
Rr425901 1863 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235121661
MGI SNP Detail
Chr1:189775615 Gm39736 within coordinates of
Rr425901 1901 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs32123815
MGI SNP Detail
Chr1:189775636 Gm39736 within coordinates of
Rr425901 1922 bp distal
SNP C/T T C T C T
rs219114780
MGI SNP Detail
Chr1:189775640 Gm39736 within coordinates of
Rr425901 1926 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32339789
MGI SNP Detail
Chr1:189775671 Gm39736 within coordinates of
Rr425901 1957 bp distal
SNP A/G G A G A G
rs253477338
MGI SNP Detail
Chr1:189775701 Gm39736 within coordinates of
Rr425901 1987 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T T T T T T T T T C T T T T
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Showing SNP(s) 1 - 74 of 74

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory

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