About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID
Rr425914
regulatory region 425914
MGI:7888046

<< first < prev12 next > last >>
Showing SNP(s) 1 - 100 of 104

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs217659568
MGI SNP Detail
Alliance Variant
Chr1:189855379 Prox1 Intron
Prox1 mRNA-UTR
Rr425914 1860 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs234765562
MGI SNP Detail
Alliance Variant
Chr1:189855406 Prox1 mRNA-UTR
Rr425914 1833 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs33049269
MGI SNP Detail
Alliance Variant
Chr1:189855853 Prox1 Intron
Rr425913 within coordinates of
Rr425914 1386 bp proximal
SNP C/G C C C C C C C C C G C C C C
rs586146859
MGI SNP Detail
Alliance Variant
Chr1:189855873 Prox1 Intron
Rr425913 within coordinates of
Rr425914 1366 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs214372307
MGI SNP Detail
Alliance Variant
Chr1:189855897 Prox1 Intron
Rr425914 1342 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C C C C C C C C C T C C C C
rs33049272
MGI SNP Detail
Alliance Variant
Chr1:189855900 Prox1 Intron
Rr425914 1339 bp proximal
SNP A/G G G G G G G G G G A G G G G
rs31714450
MGI SNP Detail
Alliance Variant
Chr1:189856008 Prox1 Intron
Rr425914 1231 bp proximal
SNP G/T G G T G G T
rs221870493
MGI SNP Detail
Alliance Variant
Chr1:189856105 Prox1 Intron
Rr425914 1134 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs244206861
MGI SNP Detail
Alliance Variant
Chr1:189856311 Prox1 Intron
Rr425914 928 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs260955194
MGI SNP Detail
Alliance Variant
Chr1:189856316 Prox1 Intron
Rr425914 923 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs226237335
MGI SNP Detail
Alliance Variant
Chr1:189856355 Prox1 Intron
Rr425914 884 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240414424
MGI SNP Detail
Alliance Variant
Chr1:189856404 Prox1 Intron
Rr425914 835 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T T T T T T T T T T T T T G T T T T
rs31783268
MGI SNP Detail
Alliance Variant
Chr1:189856472 Prox1 Intron
Rr425914 767 bp proximal
SNP A/G G G G G G G G G A G G G G G G G
rs33043294
MGI SNP Detail
Alliance Variant
Chr1:189856554 Prox1 Intron
Rr425914 685 bp proximal
SNP C/T T T T T T T T T T C T T T T
rs33043297
MGI SNP Detail
Alliance Variant
Chr1:189856609 Prox1 Intron
Rr425914 630 bp proximal
SNP C/T C C C C C C C C C T C C C C
rs237891798
MGI SNP Detail
Alliance Variant
Chr1:189856625 Prox1 Intron
Rr425914 614 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs264927095
MGI SNP Detail
Alliance Variant
Chr1:189856665 Prox1 Intron
Rr425914 574 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs227432412
MGI SNP Detail
Alliance Variant
Chr1:189856717 Prox1 Intron
Rr425914 522 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32060303
MGI SNP Detail
Alliance Variant
Chr1:189856733 Prox1 Intron
Rr425914 506 bp proximal
SNP C/T C C T C C T T C C C C T C C C C
rs217551981
MGI SNP Detail
Alliance Variant
Chr1:189856811 Prox1 Intron
Rr425914 428 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs31378221
MGI SNP Detail
Alliance Variant
Chr1:189856879 Prox1 Intron
Rr425914 360 bp proximal
SNP C/T T T C C T T C
rs246155049
MGI SNP Detail
Alliance Variant
Chr1:189856945 Prox1 Intron
Rr425914 294 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs214410008
MGI SNP Detail
Alliance Variant
Chr1:189856989 Prox1 Intron
Rr425914 250 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs231674216
MGI SNP Detail
Alliance Variant
Chr1:189857093 Prox1 Intron
Rr425914 146 bp proximal
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs256170766
MGI SNP Detail
Alliance Variant
Chr1:189857186 Prox1 Intron
Rr425914 53 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs212018625
MGI SNP Detail
Alliance Variant
Chr1:189857223 Prox1 Intron
Rr425914 16 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs234863581
MGI SNP Detail
Alliance Variant
Chr1:189857264 Prox1 Intron
Rr425914 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33043302
MGI SNP Detail
Alliance Variant
Chr1:189857293 Prox1 Intron
Rr425914 within coordinates of
SNP A/G G G G G G G G G G G G G A
rs33044105
MGI SNP Detail
Alliance Variant
Chr1:189857308 Prox1 Intron
Rr425914 within coordinates of
SNP A/C A C A A C C A A A A A A A
rs233675617
MGI SNP Detail
Alliance Variant
Chr1:189857332 Prox1 Intron
Rr425914 within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A A A A A A A A A A A T A A A A
rs251281210
MGI SNP Detail
Alliance Variant
Chr1:189857337 Prox1 Intron
Rr425914 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs32431790
MGI SNP Detail
Alliance Variant
Chr1:189857351 Prox1 Intron
Rr425914 within coordinates of
SNP A/C A A C A A C C C A A A A C A A A C C
rs246357999
MGI SNP Detail
Alliance Variant
Chr1:189857354 Prox1 Intron
Rr425914 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs33044110
MGI SNP Detail
Alliance Variant
Chr1:189857394 Prox1 Intron
Rr425914 within coordinates of
SNP C/G G G G G G G G G G C G G G G
rs220379747
MGI SNP Detail
Alliance Variant
Chr1:189857486 Prox1 Intron
Rr425914 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs248130662
MGI SNP Detail
Alliance Variant
Chr1:189857499 Prox1 Intron
Rr425914 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265875981
MGI SNP Detail
Alliance Variant
Chr1:189857525 Prox1 Intron
Rr425914 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227897469
MGI SNP Detail
Alliance Variant
Chr1:189857530 Prox1 Intron
Rr425914 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246186300
MGI SNP Detail
Alliance Variant
Chr1:189857548 Prox1 Intron
Rr425914 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs257997991
MGI SNP Detail
Alliance Variant
Chr1:189857559 Gm69899 within coordinates of
Prox1 Intron
Rr425914 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225755345
MGI SNP Detail
Alliance Variant
Chr1:189857581 Gm69899 within coordinates of
Prox1 Intron
Rr425914 18 bp distal
Rr425915 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254103078
MGI SNP Detail
Alliance Variant
Chr1:189857582 Gm69899 within coordinates of
Prox1 Intron
Rr425914 19 bp distal
Rr425915 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs211937802
MGI SNP Detail
Alliance Variant
Chr1:189857584 Gm69899 within coordinates of
Prox1 Intron
Rr425914 21 bp distal
Rr425915 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs242959077
MGI SNP Detail
Alliance Variant
Chr1:189857611 Gm69899 within coordinates of
Prox1 Intron
Rr425914 48 bp distal
Rr425915 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs32736041
MGI SNP Detail
Alliance Variant
Chr1:189857613 Gm69899 within coordinates of
Prox1 Intron
Rr425914 50 bp distal
Rr425915 within coordinates of
SNP A/G A A G A A G G G A A A A G A A A G G
rs33044905
MGI SNP Detail
Alliance Variant
Chr1:189857629 Gm69899 within coordinates of
Prox1 Intron
Rr425914 66 bp distal
Rr425915 within coordinates of
SNP A/G G G G G G G G G G G G G G A
rs233710171
MGI SNP Detail
Alliance Variant
Chr1:189857648 Gm69899 within coordinates of
Prox1 Intron
Rr425914 85 bp distal
Rr425915 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs251320886
MGI SNP Detail
Alliance Variant
Chr1:189857657 Gm69899 within coordinates of
Prox1 Intron
Rr425914 94 bp distal
Rr425915 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs220058602
MGI SNP Detail
Alliance Variant
Chr1:189857661 Gm69899 within coordinates of
Prox1 Intron
Rr425914 98 bp distal
Rr425915 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G A A A
rs236567321
MGI SNP Detail
Alliance Variant
Chr1:189857676 Gm69899 within coordinates of
Prox1 Intron
Rr425914 113 bp distal
Rr425915 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs261742133
MGI SNP Detail
Alliance Variant
Chr1:189857696 Gm69899 within coordinates of
Prox1 Intron
Rr425914 133 bp distal
Rr425915 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220906051
MGI SNP Detail
Alliance Variant
Chr1:189857703 Gm69899 within coordinates of
Prox1 Intron
Rr425914 140 bp distal
Rr425915 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251784127
MGI SNP Detail
Alliance Variant
Chr1:189857709 Gm69899 within coordinates of
Prox1 Intron
Rr425914 146 bp distal
Rr425915 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs260840653
MGI SNP Detail
Alliance Variant
Chr1:189857750 Gm69899 within coordinates of
Prox1 Intron
Rr425914 187 bp distal
Rr425915 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs221608548
MGI SNP Detail
Alliance Variant
Chr1:189857779 Gm69899 within coordinates of
Prox1 Intron
Rr425914 216 bp distal
Rr425915 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs240263794
MGI SNP Detail
Alliance Variant
Chr1:189857800 Gm69899 within coordinates of
Prox1 Intron
Rr425914 237 bp distal
Rr425915 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs258036076
MGI SNP Detail
Alliance Variant
Chr1:189857807 Gm69899 within coordinates of
Prox1 Intron
Rr425914 244 bp distal
Rr425915 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs31913139
MGI SNP Detail
Alliance Variant
Chr1:189857825 Gm69899 within coordinates of
Prox1 Intron
Rr425914 262 bp distal
Rr425915 within coordinates of
SNP A/G G A G G
rs249564444
MGI SNP Detail
Alliance Variant
Chr1:189857869 Gm69899 within coordinates of
Prox1 Intron
Rr425914 306 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs264655525
MGI SNP Detail
Alliance Variant
Chr1:189857879 Gm69899 within coordinates of
Prox1 Intron
Rr425914 316 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs233826336
MGI SNP Detail
Alliance Variant
Chr1:189857895 Gm69899 within coordinates of
Prox1 Intron
Rr425914 332 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs31647185
MGI SNP Detail
Alliance Variant
Chr1:189857896 Gm69899 within coordinates of
Prox1 Intron
Rr425914 333 bp distal
SNP A/C A A C C A A C
rs33044908
MGI SNP Detail
Alliance Variant
Chr1:189858022 Gm69899 within coordinates of
Prox1 Intron
Rr425914 459 bp distal
SNP C/T C C C C C C C C C C T C C C C
rs583678598
MGI SNP Detail
Alliance Variant
Chr1:189858044 Gm69899 within coordinates of
Prox1 Intron
Rr425914 481 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs215778836
MGI SNP Detail
Alliance Variant
Chr1:189858064 Gm69899 within coordinates of
Prox1 Intron
Rr425914 501 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs31335264
MGI SNP Detail
Alliance Variant
Chr1:189858076 Gm69899 within coordinates of
Prox1 Intron
Rr425914 513 bp distal
SNP C/T T C T C C T T T T C C C C T C C C T T
rs245389920
MGI SNP Detail
Alliance Variant
Chr1:189858114 Gm69899 within coordinates of
Prox1 Intron
Rr425914 551 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs214479894
MGI SNP Detail
Alliance Variant
Chr1:189858158 Gm69899 within coordinates of
Prox1 Intron
Rr425914 595 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs31765136
MGI SNP Detail
Alliance Variant
Chr1:189858260 Gm69899 within coordinates of
Prox1 Intron
Rr425914 697 bp distal
SNP C/T C T C C T T C C C C C C C C C
rs32151463
MGI SNP Detail
Alliance Variant
Chr1:189858307 Gm69899 within coordinates of
Prox1 Intron
Rr425914 744 bp distal
SNP C/T C C T T C T
rs212765360
MGI SNP Detail
Alliance Variant
Chr1:189858366 Gm69899 within coordinates of
Prox1 Intron
Rr425914 803 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs33045935
MGI SNP Detail
Alliance Variant
Chr1:189858494 Gm69899 within coordinates of
Prox1 Intron
Rr425914 931 bp distal
SNP C/T T T T T T T T C T T T C T
rs254729757
MGI SNP Detail
Alliance Variant
Chr1:189858538 Gm69899 within coordinates of
Prox1 Intron
Rr425914 975 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs223167876
MGI SNP Detail
Alliance Variant
Chr1:189858544 Gm69899 within coordinates of
Prox1 Intron
Rr425914 981 bp distal
SNP A/G G A
rs231638732
MGI SNP Detail
Alliance Variant
Chr1:189858545 Gm69899 within coordinates of
Prox1 Intron
Rr425914 982 bp distal
SNP C/T T C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs387298725
MGI SNP Detail
Alliance Variant
Chr1:189858565 Gm69899 within coordinates of
Prox1 Intron
Rr425914 1002 bp distal
SNP A/G A A A A A A G G G A G A A A A A
rs580528944
MGI SNP Detail
Alliance Variant
Chr1:189858693 Gm69899 within coordinates of
Prox1 Intron
Rr425914 1130 bp distal
SNP T T T T T T T T T
rs581497504
MGI SNP Detail
Alliance Variant
Chr1:189858734 Gm69899 within coordinates of
Prox1 Intron
Rr425914 1171 bp distal
SNP C C C C C C C C C C C C C C C
rs584874619
MGI SNP Detail
Alliance Variant
Chr1:189858738 Gm69899 within coordinates of
Prox1 Intron
Rr425914 1175 bp distal
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs251844476
MGI SNP Detail
Alliance Variant
Chr1:189858742 Gm69899 within coordinates of
Prox1 Intron
Rr425914 1179 bp distal
SNP C/T T T C T T T C C C C C T C T T C T T T T T C C T T T T C T T T T C C T C C
rs222339175
MGI SNP Detail
Alliance Variant
Chr1:189858748 Gm69899 within coordinates of
Prox1 Intron
Rr425914 1185 bp distal
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs244679602
MGI SNP Detail
Alliance Variant
Chr1:189858759 Gm69899 within coordinates of
Prox1 Intron
Rr425914 1196 bp distal
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs261234649
MGI SNP Detail
Alliance Variant
Chr1:189858763 Gm69899 within coordinates of
Prox1 Intron
Rr425914 1200 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs234982639
MGI SNP Detail
Alliance Variant
Chr1:189858770 Gm69899 within coordinates of
Prox1 Intron
Rr425914 1207 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240780093
MGI SNP Detail
Alliance Variant
Chr1:189858772 Gm69899 within coordinates of
Prox1 Intron
Rr425914 1209 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs257970011
MGI SNP Detail
Alliance Variant
Chr1:189858787 Gm69899 within coordinates of
Prox1 Intron
Rr425914 1224 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs226677934
MGI SNP Detail
Alliance Variant
Chr1:189858866 Gm69899 within coordinates of
Prox1 Intron
Rr425914 1303 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244452171
MGI SNP Detail
Alliance Variant
Chr1:189858867 Gm69899 within coordinates of
Prox1 Intron
Rr425914 1304 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs214613753
MGI SNP Detail
Alliance Variant
Chr1:189858871 Gm69899 within coordinates of
Prox1 Intron
Rr425914 1308 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230164268
MGI SNP Detail
Alliance Variant
Chr1:189858899 Gm69899 within coordinates of
Prox1 Intron
Rr425914 1336 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33045938
MGI SNP Detail
Alliance Variant
Chr1:189858919 Gm69899 within coordinates of
Prox1 Intron
Rr425914 1356 bp distal
SNP C/T C C C C C C C C C T C C C C
rs254329983
MGI SNP Detail
Alliance Variant
Chr1:189859092 Prox1 Intron
Rr425914 1529 bp distal
SNP C/T C C C C C C T T C C C C C C C C T C T C C T C C C C T C C C C C C C C C T T T T T C C C C C C C T C C C C
rs33045941
MGI SNP Detail
Alliance Variant
Chr1:189859116 Prox1 Intron
Rr425914 1553 bp distal
SNP A/G A A A A A A A A A A G A A A A
rs33046494
MGI SNP Detail
Alliance Variant
Chr1:189859138 Prox1 Intron
Rr425914 1575 bp distal
SNP C/T C C C C C C C C C T C C C C
rs212082643
MGI SNP Detail
Alliance Variant
Chr1:189859167 Prox1 Intron
Rr425914 1604 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs243513655
MGI SNP Detail
Alliance Variant
Chr1:189859197 Prox1 Intron
Rr425914 1634 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254768867
MGI SNP Detail
Alliance Variant
Chr1:189859251 Prox1 Intron
Rr425914 1688 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs216287303
MGI SNP Detail
Alliance Variant
Chr1:189859263 Prox1 Intron
Rr425914 1700 bp distal
SNP C/G C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs234301321
MGI SNP Detail
Alliance Variant
Chr1:189859264 Prox1 Intron
Rr425914 1701 bp distal
SNP C/T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs252299396
MGI SNP Detail
Alliance Variant
Chr1:189859304 Prox1 Intron
Rr425914 1741 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
<< first < prev12 next > last >>
Showing SNP(s) 1 - 100 of 104

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
03/25/2025
MGI 6.24
The Jackson Laboratory