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Mouse SNP Summary
Symbol
Name
ID 		Rr457872
regulatory region 457872
MGI:7920004

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SNP Density Heatmap
Chr11 from 104,550,618 bp to 104,554,639 bp
(4,022 bp)
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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs250968717
MGI SNP Detail
Alliance Variant		 Chr11:104550653 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 1965 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215441914
MGI SNP Detail
Alliance Variant		 Chr11:104550677 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 1941 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C T
rs234954801
MGI SNP Detail
Alliance Variant		 Chr11:104550699 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 1919 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs254373895
MGI SNP Detail
Alliance Variant		 Chr11:104550800 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 1818 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs216851849
MGI SNP Detail
Alliance Variant		 Chr11:104550801 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 1817 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs236441180
MGI SNP Detail
Alliance Variant		 Chr11:104550973 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 1645 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs252944287
MGI SNP Detail
Alliance Variant		 Chr11:104551013 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 1605 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C T C C C T
rs221803443
MGI SNP Detail
Alliance Variant		 Chr11:104551017 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 1601 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs27038452
MGI SNP Detail
Alliance Variant		 Chr11:104551062 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 1556 bp proximal
 SNP A/G G G G A
rs27038451
MGI SNP Detail
Alliance Variant		 Chr11:104551093 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 1525 bp proximal
 SNP A/G G G G A G G
rs27038450
MGI SNP Detail
Alliance Variant		 Chr11:104551104 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 1514 bp proximal
 SNP C/G C C C C G C C C C G
rs242071786
MGI SNP Detail
Alliance Variant		 Chr11:104551109 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 1509 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258683137
MGI SNP Detail
Alliance Variant		 Chr11:104551136 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 1482 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs222493094
MGI SNP Detail
Alliance Variant		 Chr11:104551151 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 1467 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs27038449
MGI SNP Detail
Alliance Variant		 Chr11:104551155 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 1463 bp proximal
 SNP C/T C T T T C T C
rs257800067
MGI SNP Detail
Alliance Variant		 Chr11:104551207 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 1411 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229459440
MGI SNP Detail
Alliance Variant		 Chr11:104551218 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 1400 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs29402122
MGI SNP Detail
Alliance Variant		 Chr11:104551236 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 1382 bp proximal
 SNP C/G C G G
rs262973007
MGI SNP Detail
Alliance Variant		 Chr11:104551262 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 1356 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs228562788
MGI SNP Detail
Alliance Variant		 Chr11:104551264 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 1354 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27038448
MGI SNP Detail
Alliance Variant		 Chr11:104551305 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 1313 bp proximal
 SNP A/G G G G G A
rs216817388
MGI SNP Detail
Alliance Variant		 Chr11:104551354 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 1264 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236613620
MGI SNP Detail
Alliance Variant		 Chr11:104551380 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 1238 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs246556583
MGI SNP Detail
Alliance Variant		 Chr11:104551386 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 1232 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T C T T T T T T T C T T T C
rs215948148
MGI SNP Detail
Alliance Variant		 Chr11:104551387 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 1231 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs236283566
MGI SNP Detail
Alliance Variant		 Chr11:104551388 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 1230 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs48265107
MGI SNP Detail
Alliance Variant		 Chr11:104551392 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 1226 bp proximal
 SNP A/G A G
rs220400792
MGI SNP Detail
Alliance Variant		 Chr11:104551397 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 1221 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T C T T T T T T T C T T T C
rs237090866
MGI SNP Detail
Alliance Variant		 Chr11:104551423 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 1195 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C C C C C C C C G C C C C C C C G C C C G
rs252566069
MGI SNP Detail
Alliance Variant		 Chr11:104551424 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 1194 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T C
rs584798551
MGI SNP Detail
Alliance Variant		 Chr11:104551425 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 1193 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G G G G G G G G T G G G G G G G G G G G T
rs222462405
MGI SNP Detail
Alliance Variant		 Chr11:104551494 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 1124 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T T T T T T T T G T T T T T T T T T T T G
rs238939158
MGI SNP Detail
Alliance Variant		 Chr11:104551510 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 1108 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs257856035
MGI SNP Detail
Alliance Variant		 Chr11:104551531 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 1087 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G
rs221658049
MGI SNP Detail
Alliance Variant		 Chr11:104551544 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 1074 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs243749016
MGI SNP Detail
Alliance Variant		 Chr11:104551555 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 1063 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265385232
MGI SNP Detail
Alliance Variant		 Chr11:104551560 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 1058 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228188066
MGI SNP Detail
Alliance Variant		 Chr11:104551574 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 1044 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T C T T T T T T T C T T T C
rs238340102
MGI SNP Detail
Alliance Variant		 Chr11:104551737 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 881 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27038447
MGI SNP Detail
Alliance Variant		 Chr11:104551765 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 853 bp proximal
 SNP G/T T T T T T T G
rs229483370
MGI SNP Detail
Alliance Variant		 Chr11:104551774 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 844 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C T C C C T
rs246623083
MGI SNP Detail
Alliance Variant		 Chr11:104551805 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 813 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T C T T T C
rs216101311
MGI SNP Detail
Alliance Variant		 Chr11:104551806 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 812 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G G G G G G G G T G G G G G G G T G G G T
rs230260787
MGI SNP Detail
Alliance Variant		 Chr11:104551817 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457871 within coordinates of
Rr457872 801 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T C
rs251623069
MGI SNP Detail
Alliance Variant		 Chr11:104551959 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457871 within coordinates of
Rr457872 659 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T T T T T T T T G T T T T T T T T T T T G
rs212176371
MGI SNP Detail
Alliance Variant		 Chr11:104551964 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457871 within coordinates of
Rr457872 654 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs235470292
MGI SNP Detail
Alliance Variant		 Chr11:104551973 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457871 within coordinates of
Rr457872 645 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs252535068
MGI SNP Detail
Alliance Variant		 Chr11:104552030 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457871 within coordinates of
Rr457872 588 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T C
rs217199540
MGI SNP Detail
Alliance Variant		 Chr11:104552033 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457871 within coordinates of
Rr457872 585 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T T T T T T T T G T T T T T T T G T T T G
rs29445613
MGI SNP Detail
Alliance Variant		 Chr11:104552073 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457871 within coordinates of
Rr457872 545 bp proximal
 SNP A/G G A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs251719426
MGI SNP Detail
Alliance Variant		 Chr11:104552084 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457871 within coordinates of
Rr457872 534 bp proximal
 SNP C/T T T T C C C C C T C T T C C C C C C C C C C C T T C C C C C C T C C C C C C C C C C C C C C C C C C C C C
rs222377176
MGI SNP Detail
Alliance Variant		 Chr11:104552101 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457871 within coordinates of
Rr457872 517 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T C T T T T T T T C T T T C
rs246481910
MGI SNP Detail
Alliance Variant		 Chr11:104552117 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457871 within coordinates of
Rr457872 501 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs255222216
MGI SNP Detail
Alliance Variant		 Chr11:104552124 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457871 within coordinates of
Rr457872 494 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs220534556
MGI SNP Detail
Alliance Variant		 Chr11:104552151 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457871 within coordinates of
Rr457872 467 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs238403891
MGI SNP Detail
Alliance Variant		 Chr11:104552194 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457871 within coordinates of
Rr457872 424 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs260939862
MGI SNP Detail
Alliance Variant		 Chr11:104552239 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457871 within coordinates of
Rr457872 379 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs265755913
MGI SNP Detail
Alliance Variant		 Chr11:104552306 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457871 within coordinates of
Rr457872 312 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T C T T C T T T T T T T T T T T T T T T C T T T T T T C T T T C
rs230241695
MGI SNP Detail
Alliance Variant		 Chr11:104552352 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457871 within coordinates of
Rr457872 266 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T C
rs256364464
MGI SNP Detail
Alliance Variant		 Chr11:104552364 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457871 within coordinates of
Rr457872 254 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212144186
MGI SNP Detail
Alliance Variant		 Chr11:104552438 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457871 within coordinates of
Rr457872 180 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs27038446
MGI SNP Detail
Alliance Variant		 Chr11:104552445 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457871 within coordinates of
Rr457872 173 bp proximal
 SNP C/T T T T T C T T C
rs246654605
MGI SNP Detail
Alliance Variant		 Chr11:104552509 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457871 within coordinates of
Rr457872 109 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217310732
MGI SNP Detail
Alliance Variant		 Chr11:104552570 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457871 within coordinates of
Rr457872 48 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs232729610
MGI SNP Detail
Alliance Variant		 Chr11:104552575 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457871 within coordinates of
Rr457872 43 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251869854
MGI SNP Detail
Alliance Variant		 Chr11:104552580 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457871 within coordinates of
Rr457872 38 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs213929024
MGI SNP Detail
Alliance Variant		 Chr11:104552581 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457871 within coordinates of
Rr457872 37 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs236807163
MGI SNP Detail
Alliance Variant		 Chr11:104552620 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457871 within coordinates of
Rr457872 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs260710889
MGI SNP Detail
Alliance Variant		 Chr11:104552665 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457871 within coordinates of
Rr457872 26 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220997947
MGI SNP Detail
Alliance Variant		 Chr11:104552667 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457871 within coordinates of
Rr457872 28 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs241728025
MGI SNP Detail
Alliance Variant		 Chr11:104552719 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457871 within coordinates of
Rr457872 80 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs578512319
MGI SNP Detail
Alliance Variant		 Chr11:104552748 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457871 within coordinates of
Rr457872 109 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A C A A A A A A A A A A A
rs254784800
MGI SNP Detail
Alliance Variant		 Chr11:104552797 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457871 within coordinates of
Rr457872 158 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A G A A A A A A A G A A A
rs223853977
MGI SNP Detail
Alliance Variant		 Chr11:104552798 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457871 within coordinates of
Rr457872 159 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G G G G G G G G T G G G G G G G T G G G
rs240768599
MGI SNP Detail
Alliance Variant		 Chr11:104552802 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457871 within coordinates of
Rr457872 163 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs580613614
MGI SNP Detail
Alliance Variant		 Chr11:104552803 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457871 within coordinates of
Rr457872 164 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G
rs263794800
MGI SNP Detail
Alliance Variant		 Chr11:104552863 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457871 within coordinates of
Rr457872 224 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T C T T T C
rs222315617
MGI SNP Detail
Alliance Variant		 Chr11:104552865 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457871 within coordinates of
Rr457872 226 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A G A A A A A A A G A A A
rs244284242
MGI SNP Detail
Alliance Variant		 Chr11:104552881 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457871 within coordinates of
Rr457872 242 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G A
rs264703391
MGI SNP Detail
Alliance Variant		 Chr11:104552911 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457871 within coordinates of
Rr457872 272 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27038445
MGI SNP Detail
Alliance Variant		 Chr11:104552921 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457871 within coordinates of
Rr457872 282 bp distal
 SNP C/T C C C C C C C C C T
rs47769805
MGI SNP Detail
Alliance Variant		 Chr11:104552970 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 331 bp distal
 SNP C C C
rs259818157
MGI SNP Detail
Alliance Variant		 Chr11:104552979 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 340 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226861903
MGI SNP Detail
Alliance Variant		 Chr11:104553037 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 398 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs584769850
MGI SNP Detail
Alliance Variant		 Chr11:104553077 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 438 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A G A A A A A A A A A A A
rs258075905
MGI SNP Detail
Alliance Variant		 Chr11:104553106 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 467 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs213557478
MGI SNP Detail
Alliance Variant		 Chr11:104553165 Itgb3 Coding-Synonymous
Itgb3 Noncoding-Transcript-Variant
Rr457872 526 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs238916718
MGI SNP Detail
Alliance Variant		 Chr11:104553172 Itgb3 Coding-NonSynonymous
Itgb3 Noncoding-Transcript-Variant
Rr457872 533 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs248931794
MGI SNP Detail
Alliance Variant		 Chr11:104553174 Itgb3 Coding-Synonymous
Itgb3 Noncoding-Transcript-Variant
Rr457872 535 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs213005077
MGI SNP Detail
Alliance Variant		 Chr11:104553228 Itgb3 Coding-Synonymous
Itgb3 Noncoding-Transcript-Variant
Rr457872 589 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235250904
MGI SNP Detail
Alliance Variant		 Chr11:104553292 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 653 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254960869
MGI SNP Detail
Alliance Variant		 Chr11:104553321 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 682 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs223812018
MGI SNP Detail
Alliance Variant		 Chr11:104553417 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 778 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs234398821
MGI SNP Detail
Alliance Variant		 Chr11:104553424 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 785 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs263572774
MGI SNP Detail
Alliance Variant		 Chr11:104553440 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 801 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27038444
MGI SNP Detail
Alliance Variant		 Chr11:104553551 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 912 bp distal
 SNP C/T C C C C C C C C C C T C
rs27038443
MGI SNP Detail
Alliance Variant		 Chr11:104553561 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 922 bp distal
 SNP A/T T T T T A T T A T
rs261616420
MGI SNP Detail
Alliance Variant		 Chr11:104553569 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 930 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218844251
MGI SNP Detail
Alliance Variant		 Chr11:104553583 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 944 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs240902091
MGI SNP Detail
Alliance Variant		 Chr11:104553586 Itgb3 Intron
Itgb3 Noncoding-Transcript-Variant
Rr457872 947 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
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Showing SNP(s) 1 - 100 of 123
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory