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Mouse SNP Summary
Symbol
Name
ID 		Rr480643
regulatory region 480643
MGI:7942775

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs47569234
MGI SNP Detail
Alliance Variant		 Chr13:56281343 Macroh2a1 Intron
Macroh2a1 Noncoding-Transcript-Variant
Rr480643 1990 bp proximal
 SNP A/C C C C C C C A C C C A C C C
rs584738155
MGI SNP Detail
Alliance Variant		 Chr13:56281396 Macroh2a1 Intron
Macroh2a1 Noncoding-Transcript-Variant
Rr480643 1937 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs230264600
MGI SNP Detail
Alliance Variant		 Chr13:56281426 Macroh2a1 Intron
Macroh2a1 Noncoding-Transcript-Variant
Rr480643 1907 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs51487530
MGI SNP Detail
Alliance Variant		 Chr13:56281487 Macroh2a1 Intron
Macroh2a1 Noncoding-Transcript-Variant
Rr480643 1846 bp proximal
 SNP A/C A A A A A A C A A A A A A A A
rs226430073
MGI SNP Detail
Alliance Variant		 Chr13:56281516 Macroh2a1 Intron
Macroh2a1 Noncoding-Transcript-Variant
Rr480643 1817 bp proximal
 SNP C/G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs241842059
MGI SNP Detail
Alliance Variant		 Chr13:56281578 Macroh2a1 Intron
Macroh2a1 Noncoding-Transcript-Variant
Rr480643 1755 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs47758624
MGI SNP Detail
Alliance Variant		 Chr13:56281769 Macroh2a1 Intron
Macroh2a1 Noncoding-Transcript-Variant
Rr480643 1564 bp proximal
 SNP G/T G G G G G G G G G G T G G T G
rs224011348
MGI SNP Detail
Alliance Variant		 Chr13:56281800 Macroh2a1 Intron
Macroh2a1 Noncoding-Transcript-Variant
Rr480643 1533 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs238261788
MGI SNP Detail
Alliance Variant		 Chr13:56281805 Macroh2a1 Intron
Macroh2a1 Noncoding-Transcript-Variant
Rr480643 1528 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255317048
MGI SNP Detail
Alliance Variant		 Chr13:56281829 Macroh2a1 Intron
Macroh2a1 Noncoding-Transcript-Variant
Rr480641 within coordinates of
Rr480643 1504 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs587023245
MGI SNP Detail
Alliance Variant		 Chr13:56281842 Macroh2a1 Intron
Macroh2a1 Noncoding-Transcript-Variant
Rr480641 within coordinates of
Rr480643 1491 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs218678940
MGI SNP Detail
Alliance Variant		 Chr13:56281860 Macroh2a1 Intron
Macroh2a1 Noncoding-Transcript-Variant
Rr480641 within coordinates of
Rr480643 1473 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs235946473
MGI SNP Detail
Alliance Variant		 Chr13:56281913 Macroh2a1 Intron
Macroh2a1 Noncoding-Transcript-Variant
Rr480641 within coordinates of
Rr480643 1420 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs581487187
MGI SNP Detail
Alliance Variant		 Chr13:56281952 Macroh2a1 Intron
Macroh2a1 Noncoding-Transcript-Variant
Rr480641 within coordinates of
Rr480643 1381 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs259976985
MGI SNP Detail
Alliance Variant		 Chr13:56281962 Macroh2a1 Intron
Macroh2a1 Noncoding-Transcript-Variant
Rr480641 within coordinates of
Rr480643 1371 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs233266665
MGI SNP Detail
Alliance Variant		 Chr13:56281968 Macroh2a1 Intron
Macroh2a1 Noncoding-Transcript-Variant
Rr480641 within coordinates of
Rr480643 1365 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs258435840
MGI SNP Detail
Alliance Variant		 Chr13:56282078 Macroh2a1 Intron
Macroh2a1 Noncoding-Transcript-Variant
Rr480641 within coordinates of
Rr480643 1255 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs231442527
MGI SNP Detail
Alliance Variant		 Chr13:56282337 Macroh2a1 Intron
Macroh2a1 Noncoding-Transcript-Variant
Rr480642 within coordinates of
Rr480643 996 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs245264494
MGI SNP Detail
Alliance Variant		 Chr13:56282428 Cpgi5695 within coordinates of
Macroh2a1 Intron
Macroh2a1 Noncoding-Transcript-Variant
Rr480642 within coordinates of
Rr480643 905 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213236962
MGI SNP Detail
Alliance Variant		 Chr13:56282429 Cpgi5695 within coordinates of
Macroh2a1 Intron
Macroh2a1 Noncoding-Transcript-Variant
Rr480642 within coordinates of
Rr480643 904 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs29525610
MGI SNP Detail
Alliance Variant		 Chr13:56282519 Cpgi5695 within coordinates of
Macroh2a1 Intron
Macroh2a1 Noncoding-Transcript-Variant
Rr480642 within coordinates of
Rr480643 814 bp proximal
 SNP A/G A A G A A
rs243189599
MGI SNP Detail
Alliance Variant		 Chr13:56282592 Cpgi5695 within coordinates of
Macroh2a1 Intron
Macroh2a1 Noncoding-Transcript-Variant
Rr480642 within coordinates of
Rr480643 741 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A G A A A A A A G A A A A A A A G A A A A
rs218738227
MGI SNP Detail
Alliance Variant		 Chr13:56282608 Cpgi5695 within coordinates of
Macroh2a1 Intron
Macroh2a1 Noncoding-Transcript-Variant
Rr480642 within coordinates of
Rr480643 725 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239185045
MGI SNP Detail
Alliance Variant		 Chr13:56282636 Cpgi5695 within coordinates of
Macroh2a1 Intron
Macroh2a1 Noncoding-Transcript-Variant
Rr480642 within coordinates of
Rr480643 697 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs263194482
MGI SNP Detail
Alliance Variant		 Chr13:56282701 Cpgi5695 within coordinates of
Macroh2a1 Intron
Macroh2a1 Noncoding-Transcript-Variant
Rr480642 within coordinates of
Rr480643 632 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs223997318
MGI SNP Detail
Alliance Variant		 Chr13:56282707 Cpgi5695 within coordinates of
Macroh2a1 Intron
Macroh2a1 Noncoding-Transcript-Variant
Rr480642 within coordinates of
Rr480643 626 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs232013593
MGI SNP Detail
Alliance Variant		 Chr13:56282755 Cpgi5695 within coordinates of
Macroh2a1 Intron
Macroh2a1 Noncoding-Transcript-Variant
Rr480642 within coordinates of
Rr480643 578 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249615183
MGI SNP Detail
Alliance Variant		 Chr13:56282807 Cpgi5695 within coordinates of
Macroh2a1 Intron
Macroh2a1 Noncoding-Transcript-Variant
Rr480642 within coordinates of
Rr480643 526 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs218620602
MGI SNP Detail
Alliance Variant		 Chr13:56282900 Cpgi5695 within coordinates of
Macroh2a1 Intron
Macroh2a1 Noncoding-Transcript-Variant
Rr480642 within coordinates of
Rr480643 433 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C C C C C C
rs235873491
MGI SNP Detail
Alliance Variant		 Chr13:56282921 Cpgi5695 within coordinates of
Macroh2a1 Intron
Macroh2a1 Noncoding-Transcript-Variant
Rr480642 within coordinates of
Rr480643 412 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs264424434
MGI SNP Detail
Alliance Variant		 Chr13:56283014 Cpgi5695 within coordinates of
Macroh2a1 Intron
Macroh2a1 Noncoding-Transcript-Variant
Rr480642 within coordinates of
Rr480643 319 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G A G G G G G G A G G G G G G G G G G G G
rs226244811
MGI SNP Detail
Alliance Variant		 Chr13:56283072 Cpgi5695 within coordinates of
Macroh2a1 Intron
Macroh2a1 Noncoding-Transcript-Variant
Rr480642 within coordinates of
Rr480643 261 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs246511484
MGI SNP Detail
Alliance Variant		 Chr13:56283373 Cpgi5695 within coordinates of
Macroh2a1 Intron
Macroh2a1 mRNA-UTR
Macroh2a1 Noncoding-Transcript-Variant
Rr480643 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C T C
rs265538971
MGI SNP Detail
Alliance Variant		 Chr13:56283374 Cpgi5695 within coordinates of
Macroh2a1 Intron
Macroh2a1 mRNA-UTR
Macroh2a1 Noncoding-Transcript-Variant
Rr480643 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226763387
MGI SNP Detail
Alliance Variant		 Chr13:56283405 Cpgi5695 within coordinates of
Macroh2a1 Intron
Macroh2a1 mRNA-UTR
Macroh2a1 Noncoding-Transcript-Variant
Rr480643 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs584798092
MGI SNP Detail
Alliance Variant		 Chr13:56283434 Cpgi5695 within coordinates of
Macroh2a1 Intron
Macroh2a1 mRNA-UTR
Macroh2a1 Noncoding-Transcript-Variant
Rr480643 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs579272609
MGI SNP Detail
Alliance Variant		 Chr13:56283439 Cpgi5695 within coordinates of
Macroh2a1 Intron
Macroh2a1 mRNA-UTR
Macroh2a1 Noncoding-Transcript-Variant
Rr480643 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs582679161
MGI SNP Detail
Alliance Variant		 Chr13:56283440 Cpgi5695 within coordinates of
Macroh2a1 Intron
Macroh2a1 mRNA-UTR
Macroh2a1 Noncoding-Transcript-Variant
Rr480643 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs584098572
MGI SNP Detail
Alliance Variant		 Chr13:56283443 Cpgi5695 within coordinates of
Macroh2a1 Intron
Macroh2a1 mRNA-UTR
Macroh2a1 Noncoding-Transcript-Variant
Rr480643 within coordinates of
Tssr122743 within coordinates of
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs245254251
MGI SNP Detail
Alliance Variant		 Chr13:56283446 Cpgi5695 within coordinates of
Macroh2a1 Intron
Macroh2a1 Noncoding-Transcript-Variant
Rr480643 within coordinates of
Tssr122743 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs257065685
MGI SNP Detail
Alliance Variant		 Chr13:56283516 Cpgi5695 within coordinates of
Macroh2a1 Intron
Macroh2a1 Noncoding-Transcript-Variant
Rr480643 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs224559248
MGI SNP Detail
Alliance Variant		 Chr13:56283532 Cpgi5695 within coordinates of
Macroh2a1 Intron
Macroh2a1 Noncoding-Transcript-Variant
Rr480643 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs249115587
MGI SNP Detail
Alliance Variant		 Chr13:56283630 Cpgi5695 within coordinates of
Macroh2a1 Noncoding-Transcript-Variant
Rr480643 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs218591960
MGI SNP Detail
Alliance Variant		 Chr13:56283649 Cpgi5695 within coordinates of
Macroh2a1 Noncoding-Transcript-Variant
Rr480643 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs6201194
MGI SNP Detail
Alliance Variant		 Chr13:56283720 Cpgi5695 within coordinates of
Macroh2a1 Noncoding-Transcript-Variant
Rr480643 within coordinates of
Tssr122748 within coordinates of
 SNP C/T C T
rs252850411
MGI SNP Detail
Alliance Variant		 Chr13:56283754 Cpgi5695 within coordinates of
Macroh2a1 Noncoding-Transcript-Variant
Rr480643 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C T C C C C T T C
rs215896491
MGI SNP Detail
Alliance Variant		 Chr13:56283773 Cpgi5695 within coordinates of
Macroh2a1 Noncoding-Transcript-Variant
Rr480643 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs29231560
MGI SNP Detail
Alliance Variant		 Chr13:56283786 Cpgi5695 within coordinates of
Macroh2a1 Noncoding-Transcript-Variant
Rr480643 within coordinates of
 SNP G/T G T G G
rs249557592
MGI SNP Detail
Alliance Variant		 Chr13:56283806 Cpgi5695 within coordinates of
Macroh2a1 Noncoding-Transcript-Variant
Rr480643 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs212734663
MGI SNP Detail
Alliance Variant		 Chr13:56283811 Cpgi5695 within coordinates of
Macroh2a1 Noncoding-Transcript-Variant
Rr480643 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs229903790
MGI SNP Detail
Alliance Variant		 Chr13:56283826 Cpgi5695 within coordinates of
Macroh2a1 Noncoding-Transcript-Variant
Rr480643 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264175378
MGI SNP Detail
Alliance Variant		 Chr13:56283885 Macroh2a1 Noncoding-Transcript-Variant
Rr480643 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225738315
MGI SNP Detail
Alliance Variant		 Chr13:56283886 Macroh2a1 Noncoding-Transcript-Variant
Rr480643 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs249188542
MGI SNP Detail
Alliance Variant		 Chr13:56283961 Macroh2a1 Noncoding-Transcript-Variant
Rr480643 27 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258761956
MGI SNP Detail
Alliance Variant		 Chr13:56283986 Macroh2a1 Noncoding-Transcript-Variant
Rr480643 52 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs220421979
MGI SNP Detail
Alliance Variant		 Chr13:56284143 Macroh2a1 Noncoding-Transcript-Variant
Rr480643 209 bp distal
 SNP C/T C C C T C C T T C C T T C C C C C C C C T T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T
rs239112037
MGI SNP Detail		 Chr13:56284296 Rr480643 362 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs578510200
MGI SNP Detail		 Chr13:56284384 Rr480643 450 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs256957047
MGI SNP Detail		 Chr13:56284570 Rr480643 636 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs224431664
MGI SNP Detail		 Chr13:56284659 Rr480643 725 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248653034
MGI SNP Detail		 Chr13:56284701 Rr480643 767 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs232773467
MGI SNP Detail		 Chr13:56284794 Rr480643 860 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs257827447
MGI SNP Detail		 Chr13:56284814 Rr480643 880 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G A G G G G G G A G G G G G G G G G G G G
rs215337747
MGI SNP Detail		 Chr13:56284891 Rr480643 957 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs225827376
MGI SNP Detail		 Chr13:56284905 Rr480643 971 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs243589719
MGI SNP Detail		 Chr13:56284922 Rr480643 988 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs48249389
MGI SNP Detail		 Chr13:56284987 Rr480643 1053 bp distal
 SNP A/G A G
rs229814538
MGI SNP Detail		 Chr13:56285040 Rr480643 1106 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260819694
MGI SNP Detail		 Chr13:56285042 Rr480643 1108 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs218076822
MGI SNP Detail		 Chr13:56285076 Rr480643 1142 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G
rs238684164
MGI SNP Detail		 Chr13:56285125 Rr480643 1191 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262933592
MGI SNP Detail		 Chr13:56285273 Rr480643 1339 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220315295
MGI SNP Detail		 Chr13:56285407 Rr480643 1473 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs238990702
MGI SNP Detail		 Chr13:56285429 Rr480643 1495 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs29547406
MGI SNP Detail		 Chr13:56285445 Rr480643 1511 bp distal
 SNP A/G G A G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs218348012
MGI SNP Detail		 Chr13:56285507 Rr480643 1573 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs251739827
MGI SNP Detail		 Chr13:56285521 Rr480643 1587 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs264175860
MGI SNP Detail		 Chr13:56285537 Rr480643 1603 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233545544
MGI SNP Detail		 Chr13:56285619 Rr480643 1685 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs245752505
MGI SNP Detail		 Chr13:56285664 Rr480643 1730 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs256779580
MGI SNP Detail		 Chr13:56285667 Rr480643 1733 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs225760663
MGI SNP Detail		 Chr13:56285674 Rr480643 1740 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs33851170
MGI SNP Detail		 Chr13:56285695 Rr480643 1761 bp distal
 SNP G/T T G T T
rs212652214
MGI SNP Detail		 Chr13:56285724 Rr480643 1790 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs227455709
MGI SNP Detail		 Chr13:56285747 Rr480643 1813 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs259995127
MGI SNP Detail		 Chr13:56285753 Rr480643 1819 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs29712131
MGI SNP Detail		 Chr13:56285755 Rr480643 1821 bp distal
 SNP A/G A G A A
rs240882643
MGI SNP Detail		 Chr13:56285797 Rr480643 1863 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T T T T T G T T T T T T T T T T T T
rs252218770
MGI SNP Detail		 Chr13:56285929 Rr480643 1995 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 89 of 89
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory