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Mouse SNP Summary
Symbol
Name
ID 		Rr498336
regulatory region 498336
MGI:7960468

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs263392301
MGI SNP Detail		 Chr14:122341243 A330035P11Rik within coordinates of
Rr498336 1999 bp proximal
 SNP A/G/T G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G A G G G G T G G G G
rs229775148
MGI SNP Detail		 Chr14:122341256 A330035P11Rik within coordinates of
Rr498336 1986 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs244213391
MGI SNP Detail		 Chr14:122341274 A330035P11Rik within coordinates of
Rr498336 1968 bp proximal
 SNP C/T C C C C C T C C C C C C C C C C C C C T C C C C C C C C C T C C C C C C C C C C C C C C T C C C C C C C T
rs214768604
MGI SNP Detail		 Chr14:122341318 A330035P11Rik within coordinates of
Rr498336 1924 bp proximal
 SNP G/T G G G G G T G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G T
rs230295350
MGI SNP Detail		 Chr14:122341330 A330035P11Rik within coordinates of
Rr498336 1912 bp proximal
 SNP C/G G G G G G C G G G G G G G G G G G G G C G G G G G G G G G C G G G G G G G G G G G G G G C G G G G G G G C
rs243286832
MGI SNP Detail		 Chr14:122341358 A330035P11Rik within coordinates of
Rr498336 1884 bp proximal
 SNP C/T C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C T
rs218336662
MGI SNP Detail		 Chr14:122341430 A330035P11Rik within coordinates of
Rr498336 1812 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs581201406
MGI SNP Detail		 Chr14:122341455 A330035P11Rik within coordinates of
Rr498336 1787 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs240460180
MGI SNP Detail		 Chr14:122341534 A330035P11Rik within coordinates of
Rr498336 1708 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs262955536
MGI SNP Detail		 Chr14:122341702 A330035P11Rik within coordinates of
Rr498336 1540 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs225077875
MGI SNP Detail		 Chr14:122341749 A330035P11Rik within coordinates of
Rr498336 1493 bp proximal
 SNP G/T G G G G G T G G G G G G G G G G G G G G G G T G G G G T G T G G G T G G G G G G T G G T T G G G G G G G T
rs231824413
MGI SNP Detail		 Chr14:122341765 A330035P11Rik within coordinates of
Rr498336 1477 bp proximal
 SNP C/T C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C T
rs252075125
MGI SNP Detail		 Chr14:122341766 A330035P11Rik within coordinates of
Rr498336 1476 bp proximal
 SNP G/T G G G G G T G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G T
rs218094559
MGI SNP Detail		 Chr14:122341772 A330035P11Rik within coordinates of
Rr498336 1470 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs237945935
MGI SNP Detail		 Chr14:122341886 A330035P11Rik within coordinates of
Rr498334 within coordinates of
Rr498336 1356 bp proximal
 SNP C/T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T C T T T T T T T T T T T T T T C T T T C T T T C
rs260101345
MGI SNP Detail		 Chr14:122341889 A330035P11Rik within coordinates of
Rr498334 within coordinates of
Rr498336 1353 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs226899968
MGI SNP Detail		 Chr14:122341893 A330035P11Rik within coordinates of
Rr498334 within coordinates of
Rr498336 1349 bp proximal
 SNP C/T C C C C C T C C C C C C C C C C C C C T C C T C C C C T C T C C C T C C C C C C T C C T T C C C T C C C T
rs244943401
MGI SNP Detail		 Chr14:122341905 A330035P11Rik within coordinates of
Rr498334 within coordinates of
Rr498336 1337 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A G A A A A A A A A A
rs265651867
MGI SNP Detail		 Chr14:122341940 A330035P11Rik within coordinates of
Rr498334 within coordinates of
Rr498336 1302 bp proximal
 SNP A/G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G A G G G G G G G G G G G G G G A G G G G G G G A
rs224975646
MGI SNP Detail		 Chr14:122342030 A330035P11Rik within coordinates of
Rr498334 within coordinates of
Rr498336 1212 bp proximal
 SNP A/C C C C C C A C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C A C C C A C C C A
rs238058774
MGI SNP Detail		 Chr14:122342096 A330035P11Rik within coordinates of
Rr498334 within coordinates of
Rr498336 1146 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs256757716
MGI SNP Detail		 Chr14:122342128 A330035P11Rik within coordinates of
Rr498334 within coordinates of
Rr498336 1114 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs223801305
MGI SNP Detail		 Chr14:122342175 A330035P11Rik within coordinates of
Rr498334 within coordinates of
Rr498336 1067 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs31331629
MGI SNP Detail		 Chr14:122342239 A330035P11Rik within coordinates of
Rr404313 within coordinates of
Rr498334 within coordinates of
Rr498336 1003 bp proximal
 SNP C/T T T C C C C T
rs218385743
MGI SNP Detail		 Chr14:122342269 A330035P11Rik within coordinates of
Rr404313 within coordinates of
Rr498334 within coordinates of
Rr498336 973 bp proximal
 SNP A/C A A A A C A A A A A A A A A A A C A A C A A A C A A A A A A A A A A C A A C C A A C A A A C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs235269382
MGI SNP Detail		 Chr14:122342309 A330035P11Rik within coordinates of
Rr404313 within coordinates of
Rr498334 within coordinates of
Rr498336 933 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs252492691
MGI SNP Detail		 Chr14:122342376 A330035P11Rik within coordinates of
Cpgi6887 within coordinates of
Gm56752 within coordinates of
Rr404313 within coordinates of
Rr498335 within coordinates of
Rr498336 866 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs217376211
MGI SNP Detail		 Chr14:122342405 A330035P11Rik within coordinates of
Cpgi6887 within coordinates of
Gm56752 within coordinates of
Rr404313 within coordinates of
Rr498335 within coordinates of
Rr498336 837 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs46393617
MGI SNP Detail		 Chr14:122342442 A330035P11Rik within coordinates of
Cpgi6887 within coordinates of
Gm56752 within coordinates of
Rr404313 within coordinates of
Rr498335 within coordinates of
Rr498336 800 bp proximal
Tssr127313 within coordinates of
 SNP C/T C C C C C C C C C C C C T
rs252087063
MGI SNP Detail		 Chr14:122342444 A330035P11Rik within coordinates of
Cpgi6887 within coordinates of
Gm56752 within coordinates of
Rr404313 within coordinates of
Rr498335 within coordinates of
Rr498336 798 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs49534502
MGI SNP Detail
Alliance Variant		 Chr14:122342459 A330035P11Rik within coordinates of
Cpgi6887 within coordinates of
Gm56752 within coordinates of
Rr404313 within coordinates of
Rr498335 within coordinates of
Rr498336 783 bp proximal
Tm9sf2 Intron
 SNP C/T T T T T T T C T T T C T C
rs47454668
MGI SNP Detail
Alliance Variant		 Chr14:122342488 A330035P11Rik within coordinates of
Cpgi6887 within coordinates of
Gm56752 within coordinates of
Rr404313 within coordinates of
Rr498335 within coordinates of
Rr498336 754 bp proximal
Tm9sf2 Intron
 SNP A/C A A A A A A A A A A C A A
rs230545194
MGI SNP Detail
Alliance Variant		 Chr14:122342523 A330035P11Rik within coordinates of
Cpgi6887 within coordinates of
Gm56752 within coordinates of
Rr498335 within coordinates of
Rr498336 719 bp proximal
Tm9sf2 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs49426957
MGI SNP Detail
Alliance Variant		 Chr14:122342643 A330035P11Rik within coordinates of
Cpgi6887 within coordinates of
Gm56752 within coordinates of
Rr498335 within coordinates of
Rr498336 599 bp proximal
Tm9sf2 Intron
 SNP C/T C C C C C C C C C T C T
rs46571507
MGI SNP Detail
Alliance Variant		 Chr14:122342701 A330035P11Rik within coordinates of
Cpgi6887 within coordinates of
Gm56752 within coordinates of
Rr498335 within coordinates of
Rr498336 541 bp proximal
Tm9sf2 Intron
 SNP A/C C C C C C C A C C C A C A
rs247646113
MGI SNP Detail
Alliance Variant		 Chr14:122342911 A330035P11Rik within coordinates of
Cpgi6887 within coordinates of
Gm56752 within coordinates of
Rr498335 within coordinates of
Rr498336 331 bp proximal
Tm9sf2 Intron
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs259266679
MGI SNP Detail
Alliance Variant		 Chr14:122342938 A330035P11Rik within coordinates of
Gm56752 within coordinates of
Rr498335 within coordinates of
Rr498336 304 bp proximal
Tm9sf2 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs219140070
MGI SNP Detail
Alliance Variant		 Chr14:122343015 A330035P11Rik within coordinates of
Gm56752 within coordinates of
Rr498335 within coordinates of
Rr498336 227 bp proximal
Tm9sf2 Intron
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G
rs50115722
MGI SNP Detail
Alliance Variant		 Chr14:122343034 A330035P11Rik within coordinates of
Gm56752 within coordinates of
Rr498335 within coordinates of
Rr498336 208 bp proximal
Tm9sf2 Intron
 SNP A/G A A A A A A G A A A G A A G A
rs253578831
MGI SNP Detail
Alliance Variant		 Chr14:122343061 A330035P11Rik within coordinates of
Gm56752 within coordinates of
Rr498335 within coordinates of
Rr498336 181 bp proximal
Tm9sf2 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs223883700
MGI SNP Detail
Alliance Variant		 Chr14:122343127 A330035P11Rik within coordinates of
Gm56752 within coordinates of
Rr498335 within coordinates of
Rr498336 115 bp proximal
Tm9sf2 Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs242659306
MGI SNP Detail
Alliance Variant		 Chr14:122343137 A330035P11Rik within coordinates of
Gm56752 within coordinates of
Rr498335 within coordinates of
Rr498336 105 bp proximal
Tm9sf2 Intron
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs30228525
MGI SNP Detail
Alliance Variant		 Chr14:122343179 A330035P11Rik within coordinates of
Gm56752 within coordinates of
Rr498335 within coordinates of
Rr498336 63 bp proximal
Tm9sf2 Intron
 SNP G/T G T G G T G
rs234175837
MGI SNP Detail
Alliance Variant		 Chr14:122343225 A330035P11Rik within coordinates of
Gm56752 within coordinates of
Rr498335 within coordinates of
Rr498336 17 bp proximal
Tm9sf2 Intron
 SNP G/T T T T T T G T T T T T T T T T T T T T G T T G T T T T G T G T T T G T T T T T T G T T G G T T T G T T T G
rs257541752
MGI SNP Detail
Alliance Variant		 Chr14:122343296 A330035P11Rik within coordinates of
Gm56752 within coordinates of
Rr498336 within coordinates of
Tm9sf2 Intron
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T T T T T G T T G T T T T G T T T T
rs216087097
MGI SNP Detail
Alliance Variant		 Chr14:122343306 A330035P11Rik within coordinates of
Gm56752 within coordinates of
Rr498336 within coordinates of
Tm9sf2 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225919045
MGI SNP Detail
Alliance Variant		 Chr14:122343307 A330035P11Rik within coordinates of
Gm56752 within coordinates of
Rr498336 within coordinates of
Tm9sf2 Intron
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs245813316
MGI SNP Detail
Alliance Variant		 Chr14:122343376 A330035P11Rik within coordinates of
Gm56752 within coordinates of
Rr498336 within coordinates of
Tm9sf2 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T C T T T T T T T T T
rs212170102
MGI SNP Detail
Alliance Variant		 Chr14:122343410 A330035P11Rik within coordinates of
Gm56752 within coordinates of
Rr498336 within coordinates of
Tm9sf2 Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs230652353
MGI SNP Detail
Alliance Variant		 Chr14:122343422 A330035P11Rik within coordinates of
Gm56752 within coordinates of
Rr498336 within coordinates of
Tm9sf2 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C T C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs260283209
MGI SNP Detail
Alliance Variant		 Chr14:122343438 A330035P11Rik within coordinates of
Gm56752 within coordinates of
Rr498336 within coordinates of
Tm9sf2 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs219054218
MGI SNP Detail
Alliance Variant		 Chr14:122343458 A330035P11Rik within coordinates of
Gm56752 within coordinates of
Rr498336 within coordinates of
Tm9sf2 mRNA-UTR
Tm9sf2 Splice-Site
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A G A A A A A A A A A
rs237758477
MGI SNP Detail
Alliance Variant		 Chr14:122343510 A330035P11Rik within coordinates of
Gm56752 within coordinates of
Rr498336 within coordinates of
Tm9sf2 mRNA-UTR
 SNP A/G A A A A A G A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A G A A A G A A A
rs263254241
MGI SNP Detail
Alliance Variant		 Chr14:122343554 A330035P11Rik within coordinates of
Gm56752 within coordinates of
Rr498336 14 bp distal
Tm9sf2 mRNA-UTR
Tm9sf2 Splice-Site
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs219194793
MGI SNP Detail
Alliance Variant		 Chr14:122343661 A330035P11Rik within coordinates of
Gm56752 within coordinates of
Rr498336 121 bp distal
Tm9sf2 Intron
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G T G G T G G G G G G G G G
rs231906334
MGI SNP Detail
Alliance Variant		 Chr14:122343774 A330035P11Rik within coordinates of
Gm56752 within coordinates of
Rr498336 234 bp distal
Rr498337 within coordinates of
Tm9sf2 Intron
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs247944526
MGI SNP Detail
Alliance Variant		 Chr14:122343863 A330035P11Rik within coordinates of
Gm56752 within coordinates of
Rr498336 323 bp distal
Rr498337 within coordinates of
Tm9sf2 Intron
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs218412251
MGI SNP Detail
Alliance Variant		 Chr14:122343912 A330035P11Rik within coordinates of
Gm56752 within coordinates of
Rr498336 372 bp distal
Rr498337 within coordinates of
Tm9sf2 Intron
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs579112727
MGI SNP Detail
Alliance Variant		 Chr14:122344022 A330035P11Rik within coordinates of
Gm56752 within coordinates of
Rr498336 482 bp distal
Rr498337 within coordinates of
Tm9sf2 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T C T T T T C T T T T
rs249742782
MGI SNP Detail
Alliance Variant		 Chr14:122344161 A330035P11Rik within coordinates of
Cpgi6888 within coordinates of
Gm56752 within coordinates of
Rr498336 621 bp distal
Rr498337 within coordinates of
Tm9sf2 Intron
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G C C G C C C C C C C C C
rs264211541
MGI SNP Detail
Alliance Variant		 Chr14:122344163 A330035P11Rik within coordinates of
Cpgi6888 within coordinates of
Gm56752 within coordinates of
Rr498336 623 bp distal
Rr498337 within coordinates of
Tm9sf2 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C T C C C C T C C C C
rs227573014
MGI SNP Detail
Alliance Variant		 Chr14:122344363 A330035P11Rik within coordinates of
Cpgi6888 within coordinates of
Rr498336 823 bp distal
Rr498338 within coordinates of
Tm9sf2 mRNA-UTR
Tssr130318 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A A A T A A T A A A A T A A A A
rs245671117
MGI SNP Detail
Alliance Variant		 Chr14:122344697 Cpgi6888 within coordinates of
Rr498336 1157 bp distal
Tm9sf2 Coding-Synonymous
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A
rs260162662
MGI SNP Detail
Alliance Variant		 Chr14:122344906 Cpgi6888 within coordinates of
Rr498336 1366 bp distal
Tm9sf2 Intron
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A A A T A A T A A A T A A A A
rs30358226
MGI SNP Detail
Alliance Variant		 Chr14:122344958 Cpgi6888 within coordinates of
Rr498336 1418 bp distal
Tm9sf2 Intron
 SNP A/G A G G G G A
rs245913106
MGI SNP Detail
Alliance Variant		 Chr14:122344974 Cpgi6888 within coordinates of
Rr498336 1434 bp distal
Tm9sf2 Intron
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs256179871
MGI SNP Detail
Alliance Variant		 Chr14:122345105 Cpgi6888 within coordinates of
Rr498336 1565 bp distal
Tm9sf2 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228933107
MGI SNP Detail
Alliance Variant		 Chr14:122345168 Cpgi6888 within coordinates of
Rr498336 1628 bp distal
Tm9sf2 Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs30791525
MGI SNP Detail
Alliance Variant		 Chr14:122345228 Cpgi6888 within coordinates of
Rr498336 1688 bp distal
Tm9sf2 Intron
 SNP C/T T C C C C T
rs219183899
MGI SNP Detail
Alliance Variant		 Chr14:122345237 Cpgi6888 within coordinates of
Rr498336 1697 bp distal
Tm9sf2 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239899199
MGI SNP Detail
Alliance Variant		 Chr14:122345396 Rr498336 1856 bp distal
Tm9sf2 Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs31275600
MGI SNP Detail
Alliance Variant		 Chr14:122345411 Rr498336 1871 bp distal
Tm9sf2 Intron
 SNP G/T T G G G G T
rs213554253
MGI SNP Detail
Alliance Variant		 Chr14:122345430 Rr498336 1890 bp distal
Tm9sf2 Intron
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs30896878
MGI SNP Detail
Alliance Variant		 Chr14:122345432 Rr498336 1892 bp distal
Tm9sf2 Intron
 SNP C/T T T C C T T
rs248010726
MGI SNP Detail
Alliance Variant		 Chr14:122345460 Rr498336 1920 bp distal
Tm9sf2 Intron
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs218424731
MGI SNP Detail
Alliance Variant		 Chr14:122345461 Rr498336 1921 bp distal
Tm9sf2 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 76 of 76
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory
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