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Mouse SNP Summary
Symbol
Name
ID
Rr516662
regulatory region 516662
MGI:7978794

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs261966083
MGI SNP Detail
Alliance Variant
Chr16:48812462 Dzip3 Intron
Dzip3 Noncoding-Transcript-Variant
Rr516662 1832 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs48062155
MGI SNP Detail
Alliance Variant
Chr16:48812472 Dzip3 Intron
Dzip3 Noncoding-Transcript-Variant
Rr516662 1822 bp proximal
SNP A/T T T T T A A T T T A T
rs236227889
MGI SNP Detail
Alliance Variant
Chr16:48812503 Dzip3 Intron
Dzip3 Noncoding-Transcript-Variant
Rr516662 1791 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs260856246
MGI SNP Detail
Alliance Variant
Chr16:48812528 Dzip3 Intron
Dzip3 Noncoding-Transcript-Variant
Rr516662 1766 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs221915359
MGI SNP Detail
Alliance Variant
Chr16:48812550 Dzip3 Intron
Dzip3 Noncoding-Transcript-Variant
Rr516662 1744 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs46350741
MGI SNP Detail
Alliance Variant
Chr16:48812564 Dzip3 Intron
Dzip3 Noncoding-Transcript-Variant
Rr516662 1730 bp proximal
SNP C/T C C C C C C T C C C T C C C C
rs251251256
MGI SNP Detail
Alliance Variant
Chr16:48812645 Dzip3 Intron
Dzip3 Noncoding-Transcript-Variant
Rr516662 1649 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs4184361
MGI SNP Detail
Alliance Variant
Chr16:48812670 Dzip3 Intron
Dzip3 Noncoding-Transcript-Variant
Rr516662 1624 bp proximal
SNP C/T C C T T T C T C T C T C T T C T C
rs243336757
MGI SNP Detail
Alliance Variant
Chr16:48812671 Dzip3 Intron
Dzip3 Noncoding-Transcript-Variant
Rr516662 1623 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264939876
MGI SNP Detail
Alliance Variant
Chr16:48812720 Dzip3 Intron
Dzip3 Noncoding-Transcript-Variant
Rr516662 1574 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs227990012
MGI SNP Detail
Alliance Variant
Chr16:48812759 Dzip3 Intron
Dzip3 Noncoding-Transcript-Variant
Rr516662 1535 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs48375866
MGI SNP Detail
Alliance Variant
Chr16:48812828 Dzip3 Intron
Dzip3 Noncoding-Transcript-Variant
Rr516661 within coordinates of
Rr516662 1466 bp proximal
SNP A/G G G G G G G G G G G A G G G G
rs251697877
MGI SNP Detail
Alliance Variant
Chr16:48812858 Dzip3 Intron
Dzip3 Noncoding-Transcript-Variant
Rr516661 within coordinates of
Rr516662 1436 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs260950376
MGI SNP Detail
Alliance Variant
Chr16:48812886 Dzip3 Intron
Dzip3 Noncoding-Transcript-Variant
Rr516661 within coordinates of
Rr516662 1408 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228283661
MGI SNP Detail
Alliance Variant
Chr16:48812965 Dzip3 Intron
Dzip3 Noncoding-Transcript-Variant
Rr516661 within coordinates of
Rr516662 1329 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs246969140
MGI SNP Detail
Alliance Variant
Chr16:48813093 Dzip3 Intron
Dzip3 Noncoding-Transcript-Variant
Rr516661 within coordinates of
Rr516662 1201 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs214852665
MGI SNP Detail
Alliance Variant
Chr16:48813191 Dzip3 Intron
Dzip3 Noncoding-Transcript-Variant
Rr516661 within coordinates of
Rr516662 1103 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs230965670
MGI SNP Detail
Alliance Variant
Chr16:48813202 Dzip3 Intron
Dzip3 Noncoding-Transcript-Variant
Rr516661 within coordinates of
Rr516662 1092 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T A T T T T T T T T T T T T T T A T T T T
rs250458293
MGI SNP Detail
Alliance Variant
Chr16:48813224 Dzip3 Intron
Dzip3 Noncoding-Transcript-Variant
Rr516661 within coordinates of
Rr516662 1070 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs213144451
MGI SNP Detail
Alliance Variant
Chr16:48813399 Dzip3 Intron
Dzip3 Noncoding-Transcript-Variant
Rr516661 within coordinates of
Rr516662 895 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs234568846
MGI SNP Detail
Alliance Variant
Chr16:48813417 Dzip3 Intron
Dzip3 Noncoding-Transcript-Variant
Rr516661 within coordinates of
Rr516662 877 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs253062873
MGI SNP Detail
Alliance Variant
Chr16:48813464 Dzip3 Intron
Dzip3 Noncoding-Transcript-Variant
Rr516661 within coordinates of
Rr516662 830 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs579889343
MGI SNP Detail
Alliance Variant
Chr16:48813522 Dzip3 Intron
Dzip3 Noncoding-Transcript-Variant
Rr516661 within coordinates of
Rr516662 772 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs583518084
MGI SNP Detail
Alliance Variant
Chr16:48813609 Dzip3 Intron
Dzip3 Noncoding-Transcript-Variant
Rr516661 within coordinates of
Rr516662 685 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs216656858
MGI SNP Detail
Alliance Variant
Chr16:48813639 Dzip3 Intron
Dzip3 Noncoding-Transcript-Variant
Rr516661 within coordinates of
Rr516662 655 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs46124728
MGI SNP Detail
Alliance Variant
Chr16:48813782 Dzip3 Intron
Dzip3 Noncoding-Transcript-Variant
Rr391755 within coordinates of
Rr516661 within coordinates of
Rr516662 512 bp proximal
SNP A/T T T T A
rs108393596
MGI SNP Detail
Alliance Variant
Chr16:48813809 Dzip3 Intron
Dzip3 Noncoding-Transcript-Variant
Rr391755 within coordinates of
Rr516661 within coordinates of
Rr516662 485 bp proximal
SNP T T T
rs586570366
MGI SNP Detail
Alliance Variant
Chr16:48813828 Dzip3 Intron
Dzip3 Noncoding-Transcript-Variant
Rr391755 within coordinates of
Rr516661 within coordinates of
Rr516662 466 bp proximal
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs32759372
MGI SNP Detail
Alliance Variant
Chr16:48813915 Cpgi8305 within coordinates of
Dzip3 Intron
Dzip3 Noncoding-Transcript-Variant
Rr391755 within coordinates of
Rr516661 within coordinates of
Rr516662 379 bp proximal
SNP A/C A A A A A A A A A A C A A A A
rs223478160
MGI SNP Detail
Alliance Variant
Chr16:48813950 Cpgi8305 within coordinates of
Dzip3 Intron
Dzip3 Noncoding-Transcript-Variant
Rr391755 within coordinates of
Rr516661 within coordinates of
Rr516662 344 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs246203924
MGI SNP Detail
Alliance Variant
Chr16:48814007 Cpgi8305 within coordinates of
Dzip3 Intron
Dzip3 Noncoding-Transcript-Variant
Rr391755 within coordinates of
Rr516661 within coordinates of
Rr516662 287 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs256471572
MGI SNP Detail
Alliance Variant
Chr16:48814032 Cpgi8305 within coordinates of
Dzip3 Intron
Dzip3 Noncoding-Transcript-Variant
Rr391755 within coordinates of
Rr516661 within coordinates of
Rr516662 262 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220287113
MGI SNP Detail
Alliance Variant
Chr16:48814080 Cpgi8305 within coordinates of
Dzip3 Intron
Dzip3 Noncoding-Transcript-Variant
Rr391755 within coordinates of
Rr516661 within coordinates of
Rr516662 214 bp proximal
SNP A/G A A A A A A A A A A G A A A A A A A G G A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs248643033
MGI SNP Detail
Alliance Variant
Chr16:48814081 Cpgi8305 within coordinates of
Dzip3 Intron
Dzip3 Noncoding-Transcript-Variant
Rr391755 within coordinates of
Rr516661 within coordinates of
Rr516662 213 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260821979
MGI SNP Detail
Alliance Variant
Chr16:48814094 Cpgi8305 within coordinates of
Dzip3 Intron
Dzip3 Noncoding-Transcript-Variant
Rr391755 within coordinates of
Rr516661 within coordinates of
Rr516662 200 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs222262040
MGI SNP Detail
Alliance Variant
Chr16:48814097 Cpgi8305 within coordinates of
Dzip3 Intron
Dzip3 Noncoding-Transcript-Variant
Rr391755 within coordinates of
Rr516661 within coordinates of
Rr516662 197 bp proximal
SNP C/G C C C C C C C C C C G C C C C C C C C G C G C C C C G C C C C C C C C C C C C G C C C C C C C C C C C C
rs240886398
MGI SNP Detail
Alliance Variant
Chr16:48814122 Cpgi8305 within coordinates of
Dzip3 Intron
Dzip3 Noncoding-Transcript-Variant
Rr391755 within coordinates of
Rr516661 within coordinates of
Rr516662 172 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C
rs32760244
MGI SNP Detail
Alliance Variant
Chr16:48814215 Cpgi8305 within coordinates of
Dzip3 mRNA-UTR
Dzip3 Noncoding-Transcript-Variant
Rr391755 within coordinates of
Rr516661 within coordinates of
Rr516662 79 bp proximal
SNP A/C C C C C C A C C C C A C C A C
rs230625546
MGI SNP Detail
Alliance Variant
Chr16:48814281 Cpgi8305 within coordinates of
Dzip3 mRNA-UTR
Dzip3 Noncoding-Transcript-Variant
Rr391755 within coordinates of
Rr516661 within coordinates of
Rr516662 13 bp proximal
SNP G/T T T T T T T T T T T G G T T T T T T T G G T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
rs254796846
MGI SNP Detail
Alliance Variant
Chr16:48814466 Cpgi8305 within coordinates of
Dzip3 mRNA-UTR
Dzip3 Noncoding-Transcript-Variant
Rr391755 within coordinates of
Rr516662 within coordinates of
Tssr141319 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261841305
MGI SNP Detail
Alliance Variant
Chr16:48814475 Cpgi8305 within coordinates of
Dzip3 mRNA-UTR
Dzip3 Noncoding-Transcript-Variant
Rr391755 within coordinates of
Rr516662 within coordinates of
Tssr141319 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs227813434
MGI SNP Detail
Alliance Variant
Chr16:48814539 Cip2a mRNA-UTR
Cpgi8305 within coordinates of
Rr391755 within coordinates of
Rr516662 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs32760246
MGI SNP Detail
Alliance Variant
Chr16:48814611 Cip2a mRNA-UTR
Cip2a Noncoding-Transcript-Variant
Cpgi8305 within coordinates of
Rr391755 within coordinates of
Rr516662 50 bp distal
Rr516663 within coordinates of
SNP C/T C C C C C T C C C C C C C
rs216553008
MGI SNP Detail
Alliance Variant
Chr16:48814626 Cip2a mRNA-UTR
Cip2a Noncoding-Transcript-Variant
Cpgi8305 within coordinates of
Rr391755 within coordinates of
Rr516662 65 bp distal
Rr516663 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs579709490
MGI SNP Detail
Alliance Variant
Chr16:48814782 Cip2a Intron
Cip2a Noncoding-Transcript-Variant
Cpgi8305 within coordinates of
Rr391755 within coordinates of
Rr516662 221 bp distal
Rr516663 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs583844804
MGI SNP Detail
Alliance Variant
Chr16:48814792 Cip2a Intron
Cip2a Noncoding-Transcript-Variant
Cpgi8305 within coordinates of
Rr391755 within coordinates of
Rr516662 231 bp distal
Rr516663 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs233574755
MGI SNP Detail
Alliance Variant
Chr16:48814801 Cip2a Intron
Cip2a Noncoding-Transcript-Variant
Cpgi8305 within coordinates of
Rr391755 within coordinates of
Rr516662 240 bp distal
Rr516663 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs245226935
MGI SNP Detail
Alliance Variant
Chr16:48814812 Cip2a Intron
Cip2a Noncoding-Transcript-Variant
Cpgi8305 within coordinates of
Rr391755 within coordinates of
Rr516662 251 bp distal
Rr516663 within coordinates of
Rr516664 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs215067827
MGI SNP Detail
Alliance Variant
Chr16:48814814 Cip2a Intron
Cip2a Noncoding-Transcript-Variant
Cpgi8305 within coordinates of
Rr391755 within coordinates of
Rr516662 253 bp distal
Rr516663 within coordinates of
Rr516664 within coordinates of
SNP A/G A A A A A A A A A A G G A A A A A A A G G A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs236297380
MGI SNP Detail
Alliance Variant
Chr16:48814873 Cip2a Intron
Cip2a Noncoding-Transcript-Variant
Cpgi8305 within coordinates of
Rr391755 within coordinates of
Rr516662 312 bp distal
Rr516663 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs236557852
MGI SNP Detail
Alliance Variant
Chr16:48814908 Cip2a Intron
Cip2a Noncoding-Transcript-Variant
Cpgi8305 within coordinates of
Rr391755 within coordinates of
Rr516662 347 bp distal
Rr516663 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs587127535
MGI SNP Detail
Alliance Variant
Chr16:48814956 Cip2a Intron
Cip2a Noncoding-Transcript-Variant
Rr391755 within coordinates of
Rr516662 395 bp distal
Rr516663 within coordinates of
SNP A/C C C C C C C C C C C A C C C C C C C C A C A C C C C C C C C C C C C C C C C A C C C C C C C C C C C C
rs583452623
MGI SNP Detail
Alliance Variant
Chr16:48815093 Cip2a Intron
Cip2a Noncoding-Transcript-Variant
Rr516662 532 bp distal
Rr516663 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs254759934
MGI SNP Detail
Alliance Variant
Chr16:48815160 Cip2a Intron
Cip2a Noncoding-Transcript-Variant
Rr516662 599 bp distal
Rr516663 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs222118711
MGI SNP Detail
Alliance Variant
Chr16:48815201 Cip2a Intron
Cip2a Noncoding-Transcript-Variant
Rr516662 640 bp distal
Rr516663 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs240922029
MGI SNP Detail
Alliance Variant
Chr16:48815377 Cip2a Intron
Cip2a Noncoding-Transcript-Variant
Rr516662 816 bp distal
Rr516663 within coordinates of
SNP C/T T T T T T T T T T T C C T T T T T T T C C T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs262970894
MGI SNP Detail
Alliance Variant
Chr16:48815419 Cip2a Intron
Cip2a Noncoding-Transcript-Variant
Rr516662 858 bp distal
Rr516663 within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs222595099
MGI SNP Detail
Alliance Variant
Chr16:48815421 Cip2a Intron
Cip2a Noncoding-Transcript-Variant
Rr516662 860 bp distal
Rr516663 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T C T T T T
rs587320181
MGI SNP Detail
Alliance Variant
Chr16:48815447 Cip2a Intron
Cip2a Noncoding-Transcript-Variant
Rr516662 886 bp distal
Rr516663 within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs580999460
MGI SNP Detail
Alliance Variant
Chr16:48815453 Cip2a Intron
Cip2a Noncoding-Transcript-Variant
Rr516662 892 bp distal
Rr516663 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs242754543
MGI SNP Detail
Alliance Variant
Chr16:48815468 Cip2a Intron
Cip2a Noncoding-Transcript-Variant
Rr516662 907 bp distal
Rr516663 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs264767122
MGI SNP Detail
Alliance Variant
Chr16:48815484 Cip2a Intron
Cip2a Noncoding-Transcript-Variant
Rr516662 923 bp distal
Rr516663 within coordinates of
SNP G/T T T T T T T T T T T G G T T T T T T T G G T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
rs227454339
MGI SNP Detail
Alliance Variant
Chr16:48815505 Cip2a Intron
Cip2a Noncoding-Transcript-Variant
Rr516662 944 bp distal
Rr516663 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs247201474
MGI SNP Detail
Alliance Variant
Chr16:48815526 Cip2a Intron
Cip2a Noncoding-Transcript-Variant
Rr516662 965 bp distal
Rr516663 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs258888047
MGI SNP Detail
Alliance Variant
Chr16:48815574 Cip2a Intron
Cip2a Noncoding-Transcript-Variant
Rr516662 1013 bp distal
Rr516663 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227464063
MGI SNP Detail
Alliance Variant
Chr16:48815660 Cip2a Intron
Cip2a Noncoding-Transcript-Variant
Rr516662 1099 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245132248
MGI SNP Detail
Alliance Variant
Chr16:48815707 Cip2a Intron
Cip2a Noncoding-Transcript-Variant
Rr516662 1146 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs32760248
MGI SNP Detail
Alliance Variant
Chr16:48815749 Cip2a Intron
Cip2a Noncoding-Transcript-Variant
Rr516662 1188 bp distal
SNP A/C C C C C C A C C C C C C C C C
rs237978849
MGI SNP Detail
Alliance Variant
Chr16:48815937 Cip2a Intron
Cip2a Noncoding-Transcript-Variant
Rr516662 1376 bp distal
SNP A/G G G G G G G G G G G A A G G G G G G G G A G A G G G G A G G G G G G G G G G A G G G G G G G G G G G G
rs584688343
MGI SNP Detail
Alliance Variant
Chr16:48816108 Cip2a Intron
Cip2a Noncoding-Transcript-Variant
Rr516662 1547 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs250008429
MGI SNP Detail
Alliance Variant
Chr16:48816130 Cip2a Intron
Cip2a Noncoding-Transcript-Variant
Rr516662 1569 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs212328298
MGI SNP Detail
Alliance Variant
Chr16:48816146 Cip2a Intron
Cip2a Noncoding-Transcript-Variant
Rr516662 1585 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs32760250
MGI SNP Detail
Alliance Variant
Chr16:48816207 Cip2a Intron
Cip2a Noncoding-Transcript-Variant
Rr516662 1646 bp distal
SNP A/G A A A A A G G A A A G A A G A
rs254587365
MGI SNP Detail
Alliance Variant
Chr16:48816226 Cip2a Intron
Cip2a Noncoding-Transcript-Variant
Rr516662 1665 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs222018727
MGI SNP Detail
Alliance Variant
Chr16:48816229 Cip2a Intron
Cip2a Noncoding-Transcript-Variant
Rr516662 1668 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs32760252
MGI SNP Detail
Alliance Variant
Chr16:48816252 Cip2a Intron
Cip2a Noncoding-Transcript-Variant
Rr516662 1691 bp distal
SNP C/T C C C C C C T C C C C C C C C
rs262579153
MGI SNP Detail
Alliance Variant
Chr16:48816253 Cip2a Intron
Cip2a Noncoding-Transcript-Variant
Rr516662 1692 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs222939517
MGI SNP Detail
Alliance Variant
Chr16:48816262 Cip2a Intron
Cip2a Noncoding-Transcript-Variant
Rr516662 1701 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs32761044
MGI SNP Detail
Alliance Variant
Chr16:48816281 Cip2a Intron
Cip2a Noncoding-Transcript-Variant
Rr516662 1720 bp distal
SNP G/T G G G G G T G G G G G G G T G
rs32761046
MGI SNP Detail
Alliance Variant
Chr16:48816318 Cip2a Intron
Cip2a Noncoding-Transcript-Variant
Rr516662 1757 bp distal
SNP G/T G G G G G T G G G T G G T G
rs32761047
MGI SNP Detail
Alliance Variant
Chr16:48816342 Cip2a Intron
Cip2a Noncoding-Transcript-Variant
Rr516662 1781 bp distal
SNP A/G G G G G G G G G G G G G G A G
rs32761049
MGI SNP Detail
Alliance Variant
Chr16:48816356 Cip2a Intron
Cip2a Noncoding-Transcript-Variant
Rr516662 1795 bp distal
SNP A/G A A A A A A G A A A G A A A A
rs258745212
MGI SNP Detail
Alliance Variant
Chr16:48816369 Cip2a Intron
Cip2a Noncoding-Transcript-Variant
Rr516662 1808 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227318392
MGI SNP Detail
Alliance Variant
Chr16:48816373 Cip2a Intron
Cip2a Noncoding-Transcript-Variant
Rr516662 1812 bp distal
SNP C/T C C C C C C C C C C T C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs239111040
MGI SNP Detail
Alliance Variant
Chr16:48816386 Cip2a Intron
Cip2a Noncoding-Transcript-Variant
Rr516662 1825 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs265249433
MGI SNP Detail
Alliance Variant
Chr16:48816388 Cip2a Intron
Cip2a Noncoding-Transcript-Variant
Rr516662 1827 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs578285815
MGI SNP Detail
Alliance Variant
Chr16:48816505 Cip2a Intron
Cip2a Noncoding-Transcript-Variant
Rr516662 1944 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229973781
MGI SNP Detail
Alliance Variant
Chr16:48816513 Cip2a Intron
Cip2a Noncoding-Transcript-Variant
Rr516662 1952 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254135515
MGI SNP Detail
Alliance Variant
Chr16:48816529 Cip2a Intron
Cip2a Noncoding-Transcript-Variant
Rr516662 1968 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
<< first < prev1 next > last >>
Showing SNP(s) 1 - 89 of 89

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory