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Mouse SNP Summary
Symbol
Name
ID
Rr539834
regulatory region 539834
MGI:8001966

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs212337320
MGI SNP Detail
Alliance Variant
Chr18:67426839 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 1998 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C A C C C C C A C C C C C C C C C C C C C C C C C C C
rs230991118
MGI SNP Detail
Alliance Variant
Chr18:67426849 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 1988 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs252826751
MGI SNP Detail
Alliance Variant
Chr18:67426872 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 1965 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs227118502
MGI SNP Detail
Alliance Variant
Chr18:67426917 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 1920 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T T C T T T T T T T T T T T T T T C T T T T
rs248404757
MGI SNP Detail
Alliance Variant
Chr18:67426918 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 1919 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G G A G G G G G G G G G G G G G G G G G G G
rs259499969
MGI SNP Detail
Alliance Variant
Chr18:67426924 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 1913 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs222253371
MGI SNP Detail
Alliance Variant
Chr18:67427006 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 1831 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs244310072
MGI SNP Detail
Alliance Variant
Chr18:67427020 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 1817 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs256222925
MGI SNP Detail
Alliance Variant
Chr18:67427068 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539832 within coordinates of
Rr539834 1769 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs225158061
MGI SNP Detail
Alliance Variant
Chr18:67427076 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539832 within coordinates of
Rr539834 1761 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs233212840
MGI SNP Detail
Alliance Variant
Chr18:67427086 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 1751 bp proximal
SNP A/G G A
rs241854613
MGI SNP Detail
Alliance Variant
Chr18:67427094 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 1743 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs261176074
MGI SNP Detail
Alliance Variant
Chr18:67427132 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 1705 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T T C T T T T T T T T T T T T T T C T T T T
rs231591166
MGI SNP Detail
Alliance Variant
Chr18:67427133 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 1704 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258272568
MGI SNP Detail
Alliance Variant
Chr18:67427191 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 1646 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T T C T T T T T T T T T T T T T T C T T T T
rs262201887
MGI SNP Detail
Alliance Variant
Chr18:67427243 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 1594 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs258445724
MGI SNP Detail
Alliance Variant
Chr18:67427295 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 1542 bp proximal
SNP G/T G T
rs257443742
MGI SNP Detail
Alliance Variant
Chr18:67427296 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 1541 bp proximal
SNP C/T C T
rs230810438
MGI SNP Detail
Alliance Variant
Chr18:67427329 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 1508 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G G A G G G G G G G G G G G G G G G G G G G
rs242090865
MGI SNP Detail
Alliance Variant
Chr18:67427363 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 1474 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G
rs583108900
MGI SNP Detail
Alliance Variant
Chr18:67427407 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 1430 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A G A A A A A G A A A A A A A A A A A A A A A A A A A
rs587527999
MGI SNP Detail
Alliance Variant
Chr18:67427431 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 1406 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C C T C C C C C C C C C C C C C C C C C C C
rs581498883
MGI SNP Detail
Alliance Variant
Chr18:67427435 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 1402 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C A C C C C C A C C C C C C C C C C C C C C C C C C C
rs212630303
MGI SNP Detail
Alliance Variant
Chr18:67427446 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 1391 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234101415
MGI SNP Detail
Alliance Variant
Chr18:67427460 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 1377 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs6354742
MGI SNP Detail
Alliance Variant
Chr18:67427566 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 1271 bp proximal
SNP C/T C T C T C C T T C C C C T C C T T C
rs219442130
MGI SNP Detail
Alliance Variant
Chr18:67427727 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 1110 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C C T C C C C C C C C C C C C C C T C C C C
rs238241342
MGI SNP Detail
Alliance Variant
Chr18:67427731 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 1106 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G G A G G G G G G G G G G G G G G G G G G G
rs263584140
MGI SNP Detail
Alliance Variant
Chr18:67427743 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 1094 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs222629206
MGI SNP Detail
Alliance Variant
Chr18:67427761 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 1076 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C G C C C C C G C C C C C C C C C C C C C C G C C C C
rs232890109
MGI SNP Detail
Alliance Variant
Chr18:67427809 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 1028 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T T C T T T T T T T T T T T T T T T T T T T
rs249710094
MGI SNP Detail
Alliance Variant
Chr18:67427813 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 1024 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs218980988
MGI SNP Detail
Alliance Variant
Chr18:67427820 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 1017 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T T C T T T T T T T T T T T T T T C T T T T
rs242181740
MGI SNP Detail
Alliance Variant
Chr18:67427848 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 989 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G T G G G G G T G G G G G G G G G G G G G G G G G G G
rs264360233
MGI SNP Detail
Alliance Variant
Chr18:67427913 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 924 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A G A A A A A G A A A A A A A A A A A A A A A A A A A
rs6356703
MGI SNP Detail
Alliance Variant
Chr18:67427921 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 916 bp proximal
SNP C/T C T C T
rs246358570
MGI SNP Detail
Alliance Variant
Chr18:67427946 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 891 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265074371
MGI SNP Detail
Alliance Variant
Chr18:67427947 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 890 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs230886786
MGI SNP Detail
Alliance Variant
Chr18:67427998 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 839 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs241976965
MGI SNP Detail
Alliance Variant
Chr18:67428029 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Impa2 Splice-Site
Rr539834 808 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T T C T T T T T T T T T T T T T T C T T T T
rs254329388
MGI SNP Detail
Alliance Variant
Chr18:67428034 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 803 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228052429
MGI SNP Detail
Alliance Variant
Chr18:67428062 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 775 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G G A G G G G G G G G G G G G G G G G G G G
rs247259151
MGI SNP Detail
Alliance Variant
Chr18:67428063 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 774 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C C T C C C C C C C C C C C C C C C C C C C
rs219587856
MGI SNP Detail
Alliance Variant
Chr18:67428064 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 773 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C G C C C C C C C C C C C C C C G C C C C
rs240364707
MGI SNP Detail
Alliance Variant
Chr18:67428081 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 756 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G G A G G G G G G G G G G G G G G A G G G G
rs253444295
MGI SNP Detail
Alliance Variant
Chr18:67428102 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 735 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C A C C C C A C C C C C C C C C C C C C C C C C C C
rs214607413
MGI SNP Detail
Alliance Variant
Chr18:67428119 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 718 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G T G G G G T G G G G G G G G G G G G G G T G G G G
rs233336669
MGI SNP Detail
Alliance Variant
Chr18:67428142 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 695 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T T C T T T T T T T T T T T T T T C T T T T
rs249644674
MGI SNP Detail
Alliance Variant
Chr18:67428150 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 687 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C C T C C C C C C C C C C C C C C T C C C C
rs218970221
MGI SNP Detail
Alliance Variant
Chr18:67428165 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 672 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G C G G G G G C G G G G G G G G G G G G G G C G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs235689090
MGI SNP Detail
Alliance Variant
Chr18:67428171 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 666 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T A T T T T T A T T T T T T T T T T T T T T A T T T T
rs264330351
MGI SNP Detail
Alliance Variant
Chr18:67428180 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 657 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T T C T T T T T T T T T T T T T T C T T T T
rs584964696
MGI SNP Detail
Alliance Variant
Chr18:67428192 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 645 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A
rs224061405
MGI SNP Detail
Alliance Variant
Chr18:67428210 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 627 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs248748201
MGI SNP Detail
Alliance Variant
Chr18:67428217 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 620 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C C T C C C C C C C C C C C C C C C C C C C
rs262318771
MGI SNP Detail
Alliance Variant
Chr18:67428219 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 618 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A G A A A A A G A A A A A A A A A A A A A A G A A A A
rs219986977
MGI SNP Detail
Alliance Variant
Chr18:67428253 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 584 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A T A A A A A T A A A A A A A A A A A A A A A A A A A
rs36359799
MGI SNP Detail
Alliance Variant
Chr18:67428284 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 553 bp proximal
SNP A/G G G G G G G A G G G A G G G G
rs254317665
MGI SNP Detail
Alliance Variant
Chr18:67428311 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 526 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs586716703
MGI SNP Detail
Alliance Variant
Chr18:67428326 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 511 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A G A A A A A G A A A A A A A A A A A A A A G A A A A
rs228040287
MGI SNP Detail
Alliance Variant
Chr18:67428357 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 480 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241333967
MGI SNP Detail
Alliance Variant
Chr18:67428358 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 479 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A G A A A A A G A A A A A A A A A A A A A A G A A A A
rs265435229
MGI SNP Detail
Alliance Variant
Chr18:67428361 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 476 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C C T C C C C C C C C C C C C C C T C C C C
rs232194871
MGI SNP Detail
Alliance Variant
Chr18:67428362 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 475 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A G A A A A A G A A A A A A A A A A A A A A G A A A A
rs258545860
MGI SNP Detail
Alliance Variant
Chr18:67428378 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 459 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs214154959
MGI SNP Detail
Alliance Variant
Chr18:67428436 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 401 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs226940238
MGI SNP Detail
Alliance Variant
Chr18:67428437 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 400 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs37574919
MGI SNP Detail
Alliance Variant
Chr18:67428481 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 356 bp proximal
SNP A/G A A A A A A A A A G A A A A
rs581075724
MGI SNP Detail
Alliance Variant
Chr18:67428502 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 335 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A T A A A A A T A A A A A A A A A A A A A A T A A A A
rs243926907
MGI SNP Detail
Alliance Variant
Chr18:67428512 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 325 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213205457
MGI SNP Detail
Alliance Variant
Chr18:67428555 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 282 bp proximal
SNP A/G A G
rs236694491
MGI SNP Detail
Alliance Variant
Chr18:67428569 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 268 bp proximal
SNP A/G G A
rs260955059
MGI SNP Detail
Alliance Variant
Chr18:67428593 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 244 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs216349309
MGI SNP Detail
Alliance Variant
Chr18:67428613 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 224 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs238843063
MGI SNP Detail
Alliance Variant
Chr18:67428735 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 102 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs261919020
MGI SNP Detail
Alliance Variant
Chr18:67428776 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539833 within coordinates of
Rr539834 61 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs38943065
MGI SNP Detail
Alliance Variant
Chr18:67428808 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539833 within coordinates of
Rr539834 29 bp proximal
SNP C/T C C C C C C C C C C C C T C C
rs235827773
MGI SNP Detail
Alliance Variant
Chr18:67428891 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539833 within coordinates of
Rr539834 33 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs248928160
MGI SNP Detail
Alliance Variant
Chr18:67428945 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 87 bp distal
SNP A/T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T A T T T T
rs221946032
MGI SNP Detail
Alliance Variant
Chr18:67428946 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 88 bp distal
SNP A/T A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A T A A A A
rs250739450
MGI SNP Detail
Alliance Variant
Chr18:67428989 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 131 bp distal
SNP A/T A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A T A A A
rs255102460
MGI SNP Detail
Alliance Variant
Chr18:67429044 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 186 bp distal
SNP C/G C G
rs36249283
MGI SNP Detail
Alliance Variant
Chr18:67429133 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 275 bp distal
SNP C/G C C C C C C G C C C C G C C C G C
rs36482085
MGI SNP Detail
Alliance Variant
Chr18:67429314 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 456 bp distal
SNP A/G A A A A A A G A A A A G A A A G A
rs257813172
MGI SNP Detail
Alliance Variant
Chr18:67429340 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 482 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs226862695
MGI SNP Detail
Alliance Variant
Chr18:67429416 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 558 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs253364687
MGI SNP Detail
Alliance Variant
Chr18:67429428 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 570 bp distal
SNP G/T G T
rs37552162
MGI SNP Detail
Alliance Variant
Chr18:67429430 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 572 bp distal
SNP A/T A A A A A A A A A A A T A
rs36458270
MGI SNP Detail
Alliance Variant
Chr18:67429481 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 623 bp distal
SNP A/G G G G G G G A G G G A G G G G
rs36543282
MGI SNP Detail
Alliance Variant
Chr18:67429493 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 635 bp distal
SNP C/T C C C C C C C C C T C C T C
rs37010858
MGI SNP Detail
Alliance Variant
Chr18:67429550 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 692 bp distal
SNP C/T T T T T T T C T T T C T T C T
rs260234800
MGI SNP Detail
Alliance Variant
Chr18:67429565 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 707 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs215830618
MGI SNP Detail
Alliance Variant
Chr18:67429593 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 735 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs220820191
MGI SNP Detail
Alliance Variant
Chr18:67429648 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 790 bp distal
SNP A/G A G
rs232569931
MGI SNP Detail
Alliance Variant
Chr18:67429660 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 802 bp distal
SNP C/T T C
rs214253380
MGI SNP Detail
Alliance Variant
Chr18:67429706 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 848 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs229830380
MGI SNP Detail
Alliance Variant
Chr18:67429894 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 1036 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G C C C C C C C C C C C C
rs248818413
MGI SNP Detail
Alliance Variant
Chr18:67429906 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 1048 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs221908283
MGI SNP Detail
Alliance Variant
Chr18:67429920 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 1062 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs248323756
MGI SNP Detail
Alliance Variant
Chr18:67429927 Gm30321 within coordinates of
Impa2 Intron
Impa2 Noncoding-Transcript-Variant
Rr539834 1069 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G G A G G G G G G G G G G G G G G A G G G G
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Showing SNP(s) 1 - 100 of 139

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory