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Mouse SNP Summary
Symbol
Name
ID 		Rr539850
regulatory region 539850
MGI:8001982

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs108502604
MGI SNP Detail		 Chr18:67474736 B430212C06Rik within coordinates of
Rr539847 within coordinates of
Rr539850 1949 bp proximal
 SNP A/G G A G
rs254807194
MGI SNP Detail		 Chr18:67474744 B430212C06Rik within coordinates of
Rr539847 within coordinates of
Rr539850 1941 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs223849037
MGI SNP Detail		 Chr18:67474765 B430212C06Rik within coordinates of
Rr539847 within coordinates of
Rr539850 1920 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A T T T T T T A T T T T T T T T T T T T
rs247897074
MGI SNP Detail		 Chr18:67474767 B430212C06Rik within coordinates of
Rr539847 within coordinates of
Rr539850 1918 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs259581021
MGI SNP Detail		 Chr18:67474768 B430212C06Rik within coordinates of
Rr539847 within coordinates of
Rr539850 1917 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs108749145
MGI SNP Detail		 Chr18:67474822 B430212C06Rik within coordinates of
Rr539847 within coordinates of
Rr539850 1863 bp proximal
 SNP A/C A C A
rs244273586
MGI SNP Detail		 Chr18:67474833 B430212C06Rik within coordinates of
Rr539847 within coordinates of
Rr539850 1852 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254072421
MGI SNP Detail		 Chr18:67474852 B430212C06Rik within coordinates of
Rr539847 within coordinates of
Rr539850 1833 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs218516028
MGI SNP Detail		 Chr18:67474928 B430212C06Rik within coordinates of
Rr539847 within coordinates of
Rr539850 1757 bp proximal
 SNP C/T C C C T C C T T C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C
rs240746252
MGI SNP Detail		 Chr18:67474937 B430212C06Rik within coordinates of
Rr539847 within coordinates of
Rr539850 1748 bp proximal
 SNP G/T T T T G T T G G T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T
rs259816282
MGI SNP Detail		 Chr18:67474970 B430212C06Rik within coordinates of
Rr539847 within coordinates of
Rr539850 1715 bp proximal
 SNP A/T T T T T T A A T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T
rs51281320
MGI SNP Detail		 Chr18:67475002 B430212C06Rik within coordinates of
Rr539847 within coordinates of
Rr539850 1683 bp proximal
 SNP A/C C A A C C
rs50798203
MGI SNP Detail		 Chr18:67475041 B430212C06Rik within coordinates of
Rr539847 within coordinates of
Rr539850 1644 bp proximal
 SNP G G G G G G
rs262182548
MGI SNP Detail		 Chr18:67475059 B430212C06Rik within coordinates of
Rr539847 within coordinates of
Rr539850 1626 bp proximal
 SNP A/G A A A A A G A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A
rs49110278
MGI SNP Detail		 Chr18:67475103 B430212C06Rik within coordinates of
Rr539850 1582 bp proximal
 SNP C/T C C C C C C C T C
rs248924839
MGI SNP Detail		 Chr18:67475166 B430212C06Rik within coordinates of
Rr539850 1519 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212682508
MGI SNP Detail		 Chr18:67475237 B430212C06Rik within coordinates of
Rr539850 1448 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs49695821
MGI SNP Detail		 Chr18:67475262 B430212C06Rik within coordinates of
Rr539850 1423 bp proximal
 SNP A/G A A G G A A G G
rs248322555
MGI SNP Detail		 Chr18:67475284 B430212C06Rik within coordinates of
Rr539850 1401 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs585665799
MGI SNP Detail		 Chr18:67475299 B430212C06Rik within coordinates of
Rr539850 1386 bp proximal
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs217770026
MGI SNP Detail		 Chr18:67475306 B430212C06Rik within coordinates of
Rr539850 1379 bp proximal
 SNP C/T C C C T C C T T C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C T C C C C
rs579858596
MGI SNP Detail		 Chr18:67475309 B430212C06Rik within coordinates of
Rr539850 1376 bp proximal
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs238214315
MGI SNP Detail		 Chr18:67475314 B430212C06Rik within coordinates of
Rr539850 1371 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs47404293
MGI SNP Detail		 Chr18:67475405 B430212C06Rik within coordinates of
Rr539850 1280 bp proximal
 SNP C/T C T
rs50610627
MGI SNP Detail		 Chr18:67475444 B430212C06Rik within coordinates of
Rr539850 1241 bp proximal
 SNP C/T T C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs51120145
MGI SNP Detail		 Chr18:67475452 B430212C06Rik within coordinates of
Rr539850 1233 bp proximal
 SNP G G
rs50025953
MGI SNP Detail		 Chr18:67475473 B430212C06Rik within coordinates of
Rr539850 1212 bp proximal
 SNP T T
rs49950695
MGI SNP Detail		 Chr18:67475482 B430212C06Rik within coordinates of
Rr539850 1203 bp proximal
 SNP A/T A T
rs51179389
MGI SNP Detail		 Chr18:67475548 B430212C06Rik within coordinates of
Rr539850 1137 bp proximal
 SNP A/T T A
rs259776949
MGI SNP Detail		 Chr18:67475558 B430212C06Rik within coordinates of
Rr539850 1127 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs51484391
MGI SNP Detail		 Chr18:67475594 B430212C06Rik within coordinates of
Rr539850 1091 bp proximal
 SNP C/T T C C T C T T C
rs246354872
MGI SNP Detail		 Chr18:67475620 B430212C06Rik within coordinates of
Rr539850 1065 bp proximal
 SNP A/G G G G A G G A A G G G G G G G G G G G A G G A G G G A A G G G G G A G G G G G G A G G G G G G G A G G G G
rs586715353
MGI SNP Detail		 Chr18:67475628 B430212C06Rik within coordinates of
Rr539850 1057 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
rs579484263
MGI SNP Detail		 Chr18:67475632 B430212C06Rik within coordinates of
Rr539850 1053 bp proximal
 SNP A/G G G G A G G A A G G G G G G G G G G G A G G A G G G A A G G G G G A G G G G G G A G G G G G G G A G G G G
rs265070041
MGI SNP Detail		 Chr18:67475688 B430212C06Rik within coordinates of
Rr539850 997 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs49119707
MGI SNP Detail		 Chr18:67475752 B430212C06Rik within coordinates of
Rr539850 933 bp proximal
 SNP A/G A A A A G
rs230625741
MGI SNP Detail		 Chr18:67475846 B430212C06Rik within coordinates of
Rr539850 839 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs252063172
MGI SNP Detail		 Chr18:67475864 B430212C06Rik within coordinates of
Rr539850 821 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C C T C C C C C C C C C C C C C C C C C C C
rs256560075
MGI SNP Detail		 Chr18:67475883 B430212C06Rik within coordinates of
Rr539850 802 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A A A T A A A A A A A T A A A A
rs228442661
MGI SNP Detail		 Chr18:67475893 B430212C06Rik within coordinates of
Rr539850 792 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs248582226
MGI SNP Detail		 Chr18:67475946 B430212C06Rik within coordinates of
Rr539850 739 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs47121875
MGI SNP Detail		 Chr18:67475962 B430212C06Rik within coordinates of
Rr539848 within coordinates of
Rr539850 723 bp proximal
 SNP C/T T T C C T C
rs48571703
MGI SNP Detail		 Chr18:67476034 B430212C06Rik within coordinates of
Rr539848 within coordinates of
Rr539850 651 bp proximal
 SNP A/G G G A G G
rs50414948
MGI SNP Detail		 Chr18:67476088 B430212C06Rik within coordinates of
Rr539848 within coordinates of
Rr539850 597 bp proximal
 SNP A/G A G G G
rs253493212
MGI SNP Detail		 Chr18:67476091 B430212C06Rik within coordinates of
Rr539848 within coordinates of
Rr539850 594 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs214678875
MGI SNP Detail		 Chr18:67476105 B430212C06Rik within coordinates of
Rr539848 within coordinates of
Rr539850 580 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G A G G G G G G A G G G G G G G G G G G G
rs237049967
MGI SNP Detail		 Chr18:67476131 B430212C06Rik within coordinates of
Rr539848 within coordinates of
Rr539850 554 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs248274379
MGI SNP Detail		 Chr18:67476156 B430212C06Rik within coordinates of
Rr539848 within coordinates of
Rr539850 529 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs49682963
MGI SNP Detail		 Chr18:67476248 B430212C06Rik within coordinates of
Cpgi10173 within coordinates of
Rr539848 within coordinates of
Rr539850 437 bp proximal
 SNP C/T T T C C T C
rs234488889
MGI SNP Detail		 Chr18:67476259 B430212C06Rik within coordinates of
Cpgi10173 within coordinates of
Rr539848 within coordinates of
Rr539850 426 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs253366086
MGI SNP Detail		 Chr18:67476299 B430212C06Rik within coordinates of
Cpgi10173 within coordinates of
Rr539848 within coordinates of
Rr539850 386 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A T T T T T T A T T T T T T T T T T T T
rs224046271
MGI SNP Detail		 Chr18:67476310 B430212C06Rik within coordinates of
Cpgi10173 within coordinates of
Rr539848 within coordinates of
Rr539850 375 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G C G G G G G C G G G G G G G G G G G G G G G G G G G
rs248827463
MGI SNP Detail		 Chr18:67476329 B430212C06Rik within coordinates of
Cpgi10173 within coordinates of
Rr539848 within coordinates of
Rr539850 356 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G G G C G G G G G G G G G G G G
rs257038692
MGI SNP Detail		 Chr18:67476378 B430212C06Rik within coordinates of
Cpgi10173 within coordinates of
Rr539848 within coordinates of
Rr539850 307 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G G G G G G T G G G G G G T G G G G G G G G G G G G
rs223173077
MGI SNP Detail		 Chr18:67476379 B430212C06Rik within coordinates of
Cpgi10173 within coordinates of
Rr539848 within coordinates of
Rr539850 306 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C C C C C C A C C C C C C A C C C C C C C C C C C C
rs236860656
MGI SNP Detail		 Chr18:67476397 B430212C06Rik within coordinates of
Cpgi10173 within coordinates of
Rr539848 within coordinates of
Rr539850 288 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs29628712
MGI SNP Detail		 Chr18:67476472 B430212C06Rik within coordinates of
Cpgi10173 within coordinates of
Rr539848 within coordinates of
Rr539850 213 bp proximal
 SNP C/T C T C C
rs228368168
MGI SNP Detail		 Chr18:67476546 B430212C06Rik within coordinates of
Cpgi10173 within coordinates of
Rr539848 within coordinates of
Rr539850 139 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A A A A A C A A A A A A A C A A A A
rs242528414
MGI SNP Detail		 Chr18:67476609 B430212C06Rik within coordinates of
Cpgi10173 within coordinates of
Rr539848 within coordinates of
Rr539850 76 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs265447780
MGI SNP Detail		 Chr18:67476619 B430212C06Rik within coordinates of
Cpgi10173 within coordinates of
Rr539848 within coordinates of
Rr539850 66 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs231887432
MGI SNP Detail
Alliance Variant		 Chr18:67476689 B430212C06Rik within coordinates of
Cidea mRNA-UTR
Cpgi10173 within coordinates of
Rr539850 within coordinates of
 SNP C/T T T T C T T C C T T T T T T T T T T T C T T C T T T C C T T T T T C T T T T T T C T T T T T T T C T T T T
rs51130296
MGI SNP Detail
Alliance Variant		 Chr18:67476782 B430212C06Rik within coordinates of
Cidea mRNA-UTR
Cpgi10173 within coordinates of
Rr539850 within coordinates of
 SNP C/T C T T T
rs258641362
MGI SNP Detail
Alliance Variant		 Chr18:67476787 B430212C06Rik within coordinates of
Cidea mRNA-UTR
Cpgi10173 within coordinates of
Rr539850 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs214255934
MGI SNP Detail
Alliance Variant		 Chr18:67476823 B430212C06Rik within coordinates of
Cidea mRNA-UTR
Cpgi10173 within coordinates of
Rr539850 within coordinates of
Tssr151735 within coordinates of
 SNP C/T T T T C T T C C T T T T T T T T T T T C T T C T T T C C T T T T T C T T T T T T C T T T T T T T C T T T T
rs231661858
MGI SNP Detail
Alliance Variant		 Chr18:67476842 B430212C06Rik within coordinates of
Cidea mRNA-UTR
Cpgi10173 within coordinates of
Rr539850 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs242674996
MGI SNP Detail
Alliance Variant		 Chr18:67476881 B430212C06Rik within coordinates of
Cidea Coding-Synonymous
Cpgi10173 within coordinates of
Rr539850 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C
rs212938577
MGI SNP Detail
Alliance Variant		 Chr18:67476925 B430212C06Rik within coordinates of
Cidea Intron
Cpgi10173 within coordinates of
Rr539850 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs50524403
MGI SNP Detail
Alliance Variant		 Chr18:67476967 B430212C06Rik within coordinates of
Cidea Intron
Cpgi10173 within coordinates of
Rr539850 within coordinates of
 SNP C/T C T T C T
rs253332773
MGI SNP Detail
Alliance Variant		 Chr18:67476970 B430212C06Rik within coordinates of
Cidea Intron
Cpgi10173 within coordinates of
Rr539850 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216422658
MGI SNP Detail
Alliance Variant		 Chr18:67476988 B430212C06Rik within coordinates of
Cidea Intron
Cpgi10173 within coordinates of
Rr539850 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs238554802
MGI SNP Detail
Alliance Variant		 Chr18:67477128 B430212C06Rik within coordinates of
Cidea Intron
Cpgi10173 within coordinates of
Rr539850 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs261966834
MGI SNP Detail
Alliance Variant		 Chr18:67477141 B430212C06Rik within coordinates of
Cidea Intron
Cpgi10173 within coordinates of
Rr539850 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A G A A A A A A G A A A A A A A A A A A A
rs223256384
MGI SNP Detail
Alliance Variant		 Chr18:67477153 B430212C06Rik within coordinates of
Cidea Intron
Cpgi10173 within coordinates of
Rr539850 1 bp distal
Rr539851 within coordinates of
 SNP C/G C C C G C C G G C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C
rs237123566
MGI SNP Detail
Alliance Variant		 Chr18:67477203 Cidea Intron
Cpgi10173 within coordinates of
Rr539850 51 bp distal
Rr539851 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs250435077
MGI SNP Detail
Alliance Variant		 Chr18:67477219 Cidea Intron
Rr539850 67 bp distal
Rr539851 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs222298777
MGI SNP Detail
Alliance Variant		 Chr18:67477234 Cidea Intron
Rr539850 82 bp distal
Rr539851 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs242492959
MGI SNP Detail
Alliance Variant		 Chr18:67477241 Cidea Intron
Rr539850 89 bp distal
Rr539851 within coordinates of
 SNP G/T T T T T T T T G T T T T T T T T G T T T T G T T
rs263054297
MGI SNP Detail
Alliance Variant		 Chr18:67477255 Cidea Intron
Rr539850 103 bp distal
Rr539851 within coordinates of
 SNP A/G A A A A A A A A A A A A A A G A A A A A A A A A A G A A A A A A A G A A
rs232869449
MGI SNP Detail
Alliance Variant		 Chr18:67477293 Cidea Intron
Rr539850 141 bp distal
Rr539851 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs246720052
MGI SNP Detail
Alliance Variant		 Chr18:67477315 Cidea Intron
Rr539850 163 bp distal
Rr539851 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs583111879
MGI SNP Detail
Alliance Variant		 Chr18:67477328 Cidea Intron
Rr539850 176 bp distal
Rr539851 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A G A A A A A G A A A A A A A A A A A A A A A A A A A
rs46042990
MGI SNP Detail
Alliance Variant		 Chr18:67477365 Cidea Intron
Rr539850 213 bp distal
 SNP C/T T T C C
rs226361789
MGI SNP Detail
Alliance Variant		 Chr18:67477390 Cidea Intron
Rr539850 238 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C
rs242638854
MGI SNP Detail
Alliance Variant		 Chr18:67477394 Cidea Intron
Rr539850 242 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G G G G G G G G G G G G G G
rs587493007
MGI SNP Detail
Alliance Variant		 Chr18:67477613 Cidea Intron
Rr539850 461 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs581498719
MGI SNP Detail
Alliance Variant		 Chr18:67477630 Cidea Intron
Rr539850 478 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs213297316
MGI SNP Detail
Alliance Variant		 Chr18:67477672 Cidea Intron
Rr539850 520 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs228494806
MGI SNP Detail
Alliance Variant		 Chr18:67477728 Cidea Intron
Rr539850 576 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247564523
MGI SNP Detail
Alliance Variant		 Chr18:67477730 Cidea Intron
Rr539850 578 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs215924368
MGI SNP Detail
Alliance Variant		 Chr18:67477757 Cidea Intron
Rr539850 605 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs241266842
MGI SNP Detail
Alliance Variant		 Chr18:67477780 Cidea Intron
Rr539850 628 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs257253411
MGI SNP Detail
Alliance Variant		 Chr18:67477784 Cidea Intron
Rr539850 632 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs29983044
MGI SNP Detail
Alliance Variant		 Chr18:67477789 Cidea Intron
Rr539850 637 bp distal
 SNP C/T T C C
rs229816816
MGI SNP Detail
Alliance Variant		 Chr18:67477803 Cidea Intron
Rr539850 651 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs250396980
MGI SNP Detail
Alliance Variant		 Chr18:67477808 Cidea Intron
Rr539850 656 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A A A A A C A A A A A A A A A A A A
rs222675295
MGI SNP Detail
Alliance Variant		 Chr18:67477820 Cidea Intron
Rr539850 668 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs236060241
MGI SNP Detail
Alliance Variant		 Chr18:67477829 Cidea Intron
Rr539850 677 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262738107
MGI SNP Detail
Alliance Variant		 Chr18:67477836 Cidea Intron
Rr539850 684 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs224670284
MGI SNP Detail
Alliance Variant		 Chr18:67477840 Cidea Intron
Rr539850 688 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs245645683
MGI SNP Detail
Alliance Variant		 Chr18:67477887 Cidea Intron
Rr539850 735 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
<< first < prev12 next > last >>
Showing SNP(s) 1 - 100 of 139
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
07/22/2025
MGI 6.24 		The Jackson Laboratory