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Mouse SNP Summary
Symbol
Name
ID
Rr540177
regulatory region 540177
MGI:8002309

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Showing SNP(s) 1 - 100 of 113

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs48003796
MGI SNP Detail
Alliance Variant
Chr18:69558588 Rr540177 1963 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C T C
rs29721003
MGI SNP Detail
Alliance Variant
Chr18:69558599 Rr540177 1952 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP A/G A A G G G A G G G G G A G G G G A
rs259242761
MGI SNP Detail
Alliance Variant
Chr18:69558617 Rr540177 1934 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs579620991
MGI SNP Detail
Alliance Variant
Chr18:69558676 Rr540177 1875 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs223900603
MGI SNP Detail
Alliance Variant
Chr18:69558714 Rr540177 1837 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs46532419
MGI SNP Detail
Alliance Variant
Chr18:69558826 Rr540177 1725 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T A T
rs248239550
MGI SNP Detail
Alliance Variant
Chr18:69558854 Rr540177 1697 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252501983
MGI SNP Detail
Alliance Variant
Chr18:69558860 Rr540177 1691 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs218639994
MGI SNP Detail
Alliance Variant
Chr18:69558885 Rr540177 1666 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs235807488
MGI SNP Detail
Alliance Variant
Chr18:69558928 Rr540177 1623 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs47253904
MGI SNP Detail
Alliance Variant
Chr18:69558960 Rr540177 1591 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T A T T A T
rs230108024
MGI SNP Detail
Alliance Variant
Chr18:69559008 Rr540177 1543 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs259695052
MGI SNP Detail
Alliance Variant
Chr18:69559011 Rr540177 1540 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP A/G G A
rs46356295
MGI SNP Detail
Alliance Variant
Chr18:69559067 Rr540177 1484 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G T G G G G
rs49699649
MGI SNP Detail
Alliance Variant
Chr18:69559070 Rr540177 1481 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T C T
rs263289896
MGI SNP Detail
Alliance Variant
Chr18:69559098 Rr540177 1453 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs46374508
MGI SNP Detail
Alliance Variant
Chr18:69559144 Rr540177 1407 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C T C C T C
rs221900296
MGI SNP Detail
Alliance Variant
Chr18:69559147 Rr540177 1404 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP G/T T G
rs239979803
MGI SNP Detail
Alliance Variant
Chr18:69559289 Rr540177 1262 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP C/T C T
rs224583194
MGI SNP Detail
Alliance Variant
Chr18:69559389 Rr540177 1162 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs49630245
MGI SNP Detail
Alliance Variant
Chr18:69559391 Rr540177 1160 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G A G G G A G G
rs214612329
MGI SNP Detail
Alliance Variant
Chr18:69559394 Rr540177 1157 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs48923960
MGI SNP Detail
Alliance Variant
Chr18:69559403 Rr540177 1148 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP A/G G A A A G A G A A G A G A A G G G
rs263158372
MGI SNP Detail
Alliance Variant
Chr18:69559406 Rr540177 1145 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs50997449
MGI SNP Detail
Alliance Variant
Chr18:69559428 Rr540177 1123 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A G A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs215421120
MGI SNP Detail
Alliance Variant
Chr18:69559437 Rr540177 1114 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs46763184
MGI SNP Detail
Alliance Variant
Chr18:69559442 Rr540177 1109 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C T C
rs234903137
MGI SNP Detail
Alliance Variant
Chr18:69559447 Rr540177 1104 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs252562853
MGI SNP Detail
Alliance Variant
Chr18:69559468 Rr540177 1083 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs49111211
MGI SNP Detail
Alliance Variant
Chr18:69559544 Rr540176 within coordinates of
Rr540177 1007 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C T C
rs218520454
MGI SNP Detail
Alliance Variant
Chr18:69559553 Rr540176 within coordinates of
Rr540177 998 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs235752104
MGI SNP Detail
Alliance Variant
Chr18:69559670 Rr540176 within coordinates of
Rr540177 881 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs257868476
MGI SNP Detail
Alliance Variant
Chr18:69559727 Rr540176 within coordinates of
Rr540177 824 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs222078366
MGI SNP Detail
Alliance Variant
Chr18:69559784 Rr540176 within coordinates of
Rr540177 767 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs246561914
MGI SNP Detail
Alliance Variant
Chr18:69559821 Rr540177 730 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265513430
MGI SNP Detail
Alliance Variant
Chr18:69559826 Rr540177 725 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs234039662
MGI SNP Detail
Alliance Variant
Chr18:69559836 Rr540177 715 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs242135211
MGI SNP Detail
Alliance Variant
Chr18:69559842 Rr540177 709 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs256927204
MGI SNP Detail
Alliance Variant
Chr18:69559849 Rr540177 702 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs581885661
MGI SNP Detail
Alliance Variant
Chr18:69559850 Rr540177 701 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs47174913
MGI SNP Detail
Alliance Variant
Chr18:69559852 Rr540177 699 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C T C C C C
rs224500673
MGI SNP Detail
Alliance Variant
Chr18:69559856 Rr540177 695 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs245971094
MGI SNP Detail
Alliance Variant
Chr18:69559870 Rr540177 681 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs214307186
MGI SNP Detail
Alliance Variant
Chr18:69559882 Rr540177 669 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs233511713
MGI SNP Detail
Alliance Variant
Chr18:69559913 Rr540177 638 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs51659235
MGI SNP Detail
Alliance Variant
Chr18:69559966 Rr540177 585 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A G A
rs215728546
MGI SNP Detail
Alliance Variant
Chr18:69559972 Rr540177 579 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs234975675
MGI SNP Detail
Alliance Variant
Chr18:69559997 Rr540177 554 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs230886743
MGI SNP Detail
Alliance Variant
Chr18:69560011 Rr540177 540 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP C/G C G
rs212645207
MGI SNP Detail
Alliance Variant
Chr18:69560095 Rr540177 456 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs229926816
MGI SNP Detail
Alliance Variant
Chr18:69560108 Rr540177 443 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs262378286
MGI SNP Detail
Alliance Variant
Chr18:69560109 Rr540177 442 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs222561516
MGI SNP Detail
Alliance Variant
Chr18:69560133 Rr540177 418 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240941760
MGI SNP Detail
Alliance Variant
Chr18:69560147 Rr540177 404 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
rs258733229
MGI SNP Detail
Alliance Variant
Chr18:69560164 Rr540177 387 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs223549723
MGI SNP Detail
Alliance Variant
Chr18:69560166 Rr540177 385 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs242049955
MGI SNP Detail
Alliance Variant
Chr18:69560168 Rr540177 383 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs51210906
MGI SNP Detail
Alliance Variant
Chr18:69560170 Rr540177 381 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP A/T A A A A A A A A A A A A A T A
rs30032377
MGI SNP Detail
Alliance Variant
Chr18:69560184 Rr540177 367 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP C/T T T C C C T C C C C T C C C C T
rs244467477
MGI SNP Detail
Alliance Variant
Chr18:69560185 Rr540177 366 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs265131809
MGI SNP Detail
Alliance Variant
Chr18:69560192 Rr540177 359 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs232741576
MGI SNP Detail
Alliance Variant
Chr18:69560210 Rr540177 341 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs48086241
MGI SNP Detail
Alliance Variant
Chr18:69560214 Rr540177 337 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP A/G A A A G A A A G A A A A
rs29870203
MGI SNP Detail
Alliance Variant
Chr18:69560219 Rr540177 332 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP A/T A A T A A A
rs586560874
MGI SNP Detail
Alliance Variant
Chr18:69560239 Rr540177 312 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs580345510
MGI SNP Detail
Alliance Variant
Chr18:69560240 Rr540177 311 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs45783479
MGI SNP Detail
Alliance Variant
Chr18:69560276 Rr540177 275 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C T C C C C
rs228962822
MGI SNP Detail
Alliance Variant
Chr18:69560305 Rr540177 246 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs246406078
MGI SNP Detail
Alliance Variant
Chr18:69560313 Rr540177 238 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs583800097
MGI SNP Detail
Alliance Variant
Chr18:69560338 Rr540177 213 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs585707933
MGI SNP Detail
Alliance Variant
Chr18:69560346 Rr540177 205 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs212707949
MGI SNP Detail
Alliance Variant
Chr18:69560359 Rr540177 192 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs229706045
MGI SNP Detail
Alliance Variant
Chr18:69560468 Rr540177 83 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs251398091
MGI SNP Detail
Alliance Variant
Chr18:69560469 Rr540177 82 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30257786
MGI SNP Detail
Alliance Variant
Chr18:69560477 Rr540177 74 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP C/T C C T T T C T T C T T C T C T T C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs238541340
MGI SNP Detail
Alliance Variant
Chr18:69560486 Rr540177 65 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs262901246
MGI SNP Detail
Alliance Variant
Chr18:69560539 Rr540177 12 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs223440882
MGI SNP Detail
Alliance Variant
Chr18:69560544 Rr540177 7 bp proximal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs235631645
MGI SNP Detail
Alliance Variant
Chr18:69560571 Rr540177 within coordinates of
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs30223306
MGI SNP Detail
Alliance Variant
Chr18:69560600 Rr540177 28 bp distal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP G/T G G T G G G
rs218313790
MGI SNP Detail
Alliance Variant
Chr18:69560617 Rr540177 45 bp distal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29970853
MGI SNP Detail
Alliance Variant
Chr18:69560669 Rr540177 97 bp distal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP C/T T T C C C T C C C C T C C C C
rs49668914
MGI SNP Detail
Alliance Variant
Chr18:69560689 Rr540177 117 bp distal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T G T T G G T
rs225577438
MGI SNP Detail
Alliance Variant
Chr18:69560691 Rr540177 119 bp distal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs245611989
MGI SNP Detail
Alliance Variant
Chr18:69560711 Rr540177 139 bp distal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs260369346
MGI SNP Detail
Alliance Variant
Chr18:69560715 Rr540177 143 bp distal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs216928085
MGI SNP Detail
Alliance Variant
Chr18:69560757 Rr540177 185 bp distal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP A/T A T
rs51380710
MGI SNP Detail
Alliance Variant
Chr18:69560762 Rr540177 190 bp distal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G T G G T T G
rs51268947
MGI SNP Detail
Alliance Variant
Chr18:69560784 Rr540177 212 bp distal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T A T T A T
rs254283945
MGI SNP Detail
Alliance Variant
Chr18:69560879 Rr540177 307 bp distal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs50084636
MGI SNP Detail
Alliance Variant
Chr18:69560908 Rr540177 336 bp distal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A G A
rs256047756
MGI SNP Detail
Alliance Variant
Chr18:69561017 Rr540177 445 bp distal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs213455042
MGI SNP Detail
Alliance Variant
Chr18:69561101 Rr540177 529 bp distal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs50476879
MGI SNP Detail
Alliance Variant
Chr18:69561343 Rr540177 771 bp distal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C T C C C C
rs232989958
MGI SNP Detail
Alliance Variant
Chr18:69561362 Rr540177 790 bp distal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs252138831
MGI SNP Detail
Alliance Variant
Chr18:69561461 Rr540177 889 bp distal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs50895023
MGI SNP Detail
Alliance Variant
Chr18:69561474 Rr540177 902 bp distal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C T C
rs217394632
MGI SNP Detail
Alliance Variant
Chr18:69561543 Rr540177 971 bp distal
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs48428062
MGI SNP Detail
Alliance Variant
Chr18:69561711 Rr540177 1139 bp distal
Rr540178 within coordinates of
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C T C C T C
rs48601974
MGI SNP Detail
Alliance Variant
Chr18:69561765 Rr540177 1193 bp distal
Rr540178 within coordinates of
Tcf4 Intron
Tcf4 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 100 of 113

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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory