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Mouse SNP Summary
Symbol
Name
ID 		Rr540370
regulatory region 540370
MGI:8002502

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs583418086
MGI SNP Detail		 Chr18:71344149 Rr540370 884 bp proximal
 SNP C/T T C T C T T T T T C T T T C C C C C T C C T C
rs587317076
MGI SNP Detail		 Chr18:71344413 Rr540370 620 bp proximal
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs37507128
MGI SNP Detail		 Chr18:71344455 Rr540370 578 bp proximal
 SNP A/G G G G G G G G G G G G G G A G
rs37088016
MGI SNP Detail		 Chr18:71344466 Rr540370 567 bp proximal
 SNP A/G G G G G G G A G G G A G G A G
rs232705174
MGI SNP Detail		 Chr18:71344478 Rr540370 555 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs37228975
MGI SNP Detail		 Chr18:71344487 Rr540370 546 bp proximal
 SNP A/C A A C A A C A C A C A A A C
rs217340957
MGI SNP Detail		 Chr18:71344505 Rr540370 528 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228654963
MGI SNP Detail		 Chr18:71344513 Rr540370 520 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs36483092
MGI SNP Detail		 Chr18:71344548 Rr540370 485 bp proximal
 SNP A/G G G G A G A
rs36532531
MGI SNP Detail		 Chr18:71344572 Rr540370 461 bp proximal
 SNP G/T T T G T T G G G T G G T G G G
rs229913404
MGI SNP Detail		 Chr18:71344631 Rr540370 402 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs257720023
MGI SNP Detail		 Chr18:71344728 Rr540370 305 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs38238646
MGI SNP Detail		 Chr18:71344741 Rr540370 292 bp proximal
 SNP C/T C C C C C C T C C C C C C C C
rs38400304
MGI SNP Detail		 Chr18:71344742 Rr540370 291 bp proximal
 SNP C/G C C C C C C C C C C G C C G C
rs38596025
MGI SNP Detail		 Chr18:71344781 Rr540370 252 bp proximal
 SNP A/T A A A A A A A A A T A A T A
rs223119435
MGI SNP Detail		 Chr18:71344782 Rr540370 251 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A T T T T T T A T T A T T T T A T T T T
rs241810065
MGI SNP Detail		 Chr18:71344842 Rr540369 within coordinates of
Rr540370 191 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs29671634
MGI SNP Detail		 Chr18:71344852 Rr540369 within coordinates of
Rr540370 181 bp proximal
 SNP A/G G G G A G G A G G A G A G G A G A
rs38792849
MGI SNP Detail		 Chr18:71344918 Rr540369 within coordinates of
Rr540370 115 bp proximal
 SNP C/T C C C C C C C C C C T C C T C
rs247225879
MGI SNP Detail		 Chr18:71344933 Rr540369 within coordinates of
Rr540370 100 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs262513311
MGI SNP Detail		 Chr18:71344966 Rr540369 within coordinates of
Rr540370 67 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs37173711
MGI SNP Detail		 Chr18:71345018 Rr540369 within coordinates of
Rr540370 15 bp proximal
 SNP A/G G G G G G G A G G G G G A G
rs36871175
MGI SNP Detail		 Chr18:71345020 Rr540369 within coordinates of
Rr540370 13 bp proximal
 SNP C/G G G G G G G G G G G C G G G
rs245726072
MGI SNP Detail		 Chr18:71345052 Rr540369 within coordinates of
Rr540370 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs259966605
MGI SNP Detail		 Chr18:71345076 Rr540369 within coordinates of
Rr540370 20 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29772171
MGI SNP Detail		 Chr18:71345203 Rr540370 147 bp distal
 SNP A/C C C C C C C A C C A C C C C A C C
rs243131356
MGI SNP Detail		 Chr18:71345205 Rr540370 149 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs37950470
MGI SNP Detail		 Chr18:71345224 Rr540370 168 bp distal
 SNP A/G A A A A A A A A A A G A A G A
rs38100530
MGI SNP Detail		 Chr18:71345258 Rr540370 202 bp distal
 SNP A/G G G G G G G A G G G A G G A G
rs256173145
MGI SNP Detail		 Chr18:71345263 Rr540370 207 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs30024547
MGI SNP Detail		 Chr18:71345322 Rr540370 266 bp distal
 SNP G/T G G G T G G T G T T G T G T G T T T T
rs581732151
MGI SNP Detail		 Chr18:71345412 Rr540370 356 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs36786984
MGI SNP Detail		 Chr18:71345450 Rr540370 394 bp distal
 SNP C/T C C C C C C C C C C T C T C
rs246413677
MGI SNP Detail		 Chr18:71345469 Rr540370 413 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs36401074
MGI SNP Detail		 Chr18:71345493 Rr540370 437 bp distal
 SNP A/T T T T T T T T T T A T T A T
rs29823723
MGI SNP Detail		 Chr18:71345519 Rr540370 463 bp distal
 SNP G/T T T T T G
rs250087551
MGI SNP Detail		 Chr18:71345538 Rr540370 482 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G A G G G G A G G G G
rs36438969
MGI SNP Detail		 Chr18:71345577 Rr540370 521 bp distal
 SNP A/G A A A A A A G A A A G A A G A
rs37587323
MGI SNP Detail		 Chr18:71345628 Rr540370 572 bp distal
 SNP C/T T T T T T T C T T T T T T
rs236723051
MGI SNP Detail		 Chr18:71345640 Rr540370 584 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T T T T T G T T G T T T T G T T T T
rs262158078
MGI SNP Detail		 Chr18:71345647 Rr540370 591 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G A G G G G A G G G G
rs225209323
MGI SNP Detail		 Chr18:71345789 Rr540370 733 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs248420534
MGI SNP Detail		 Chr18:71345790 Rr540370 734 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs260279744
MGI SNP Detail		 Chr18:71345813 Rr540370 757 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs222255807
MGI SNP Detail		 Chr18:71345824 Rr540370 768 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs236816751
MGI SNP Detail		 Chr18:71345825 Rr540370 769 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253955953
MGI SNP Detail		 Chr18:71345850 Rr540370 794 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs231393516
MGI SNP Detail		 Chr18:71345856 Rr540370 800 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs583970938
MGI SNP Detail		 Chr18:71345901 Rr540370 845 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs250837339
MGI SNP Detail		 Chr18:71345953 Rr540370 897 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs265044591
MGI SNP Detail		 Chr18:71345963 Rr540370 907 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs232228676
MGI SNP Detail		 Chr18:71345981 Rr540370 925 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G C C G C C C C G C C C C
rs246333647
MGI SNP Detail		 Chr18:71345982 Rr540370 926 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217416966
MGI SNP Detail		 Chr18:71346023 Rr540370 967 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235509973
MGI SNP Detail		 Chr18:71346041 Rr540370 985 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T C T T T T C T T T T
rs244010874
MGI SNP Detail		 Chr18:71346059 Rr540370 1003 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A A A A A C A A C A A A A C A A A A
rs211695658
MGI SNP Detail		 Chr18:71346113 Rr540370 1057 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G A G G G G A G G G G
rs238844265
MGI SNP Detail		 Chr18:71346121 Rr540370 1065 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs256830013
MGI SNP Detail		 Chr18:71346148 Rr540370 1092 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C T C C C C T C C C C
rs224884080
MGI SNP Detail		 Chr18:71346193 Rr540370 1137 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs238182352
MGI SNP Detail		 Chr18:71346199 Rr540370 1143 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G T G G T G G G G T G G G G
rs253431145
MGI SNP Detail		 Chr18:71346220 Rr540370 1164 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs222324124
MGI SNP Detail		 Chr18:71346285 Rr540370 1229 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T T T T T G T T G T T T T G T T T T
rs51542951
MGI SNP Detail		 Chr18:71346292 Rr540370 1236 bp distal
 SNP A/G G A
rs253968428
MGI SNP Detail		 Chr18:71346323 Rr540370 1267 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G T G G T G G G G T G G G G
rs223475344
MGI SNP Detail		 Chr18:71346326 Rr540370 1270 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246182728
MGI SNP Detail		 Chr18:71346329 Rr540370 1273 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G T G G G G G G G G G
rs263735202
MGI SNP Detail		 Chr18:71346411 Rr540370 1355 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs30215024
MGI SNP Detail		 Chr18:71346447 Rr540370 1391 bp distal
 SNP G/T G G G T
rs246393006
MGI SNP Detail		 Chr18:71346481 Rr540370 1425 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A G A A A A A A A A A
rs587553975
MGI SNP Detail		 Chr18:71346593 Rr540370 1537 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A G A A G A A A A A A A A A A A A A A G A A A A A A A A A A
rs37312742
MGI SNP Detail		 Chr18:71346827 Rr540370 1771 bp distal
 SNP A/C C C C C C C A C C C C C C C C
rs36805324
MGI SNP Detail		 Chr18:71346836 Rr540370 1780 bp distal
 SNP A/T A A A A A A A A A A T A A T A
rs244225712
MGI SNP Detail		 Chr18:71346852 Rr540370 1796 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs211790844
MGI SNP Detail		 Chr18:71346858 Rr540370 1802 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A T A A A A A A T A A T A A A A A A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs230655560
MGI SNP Detail		 Chr18:71346865 Rr540370 1809 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C G C C C C C C C C C
rs254812167
MGI SNP Detail		 Chr18:71346871 Rr540370 1815 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs216468136
MGI SNP Detail		 Chr18:71346891 Rr540370 1835 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs30021076
MGI SNP Detail		 Chr18:71346912 Rr540370 1856 bp distal
 SNP C/G C C C G C C G C C G C G C C C G
rs253441492
MGI SNP Detail		 Chr18:71347021 Rr540370 1965 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 80 of 80
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory