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Mouse SNP Summary
Symbol
Name
ID 		Rr541073
regulatory region 541073
MGI:8003205

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs387790361
MGI SNP Detail
Alliance Variant		 Chr18:77063905 Katnal2 mRNA-UTR
Rr541073 1927 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G C G C G G G G G C G C G G G G G G G G G C G G G G G G G
rs260527342
MGI SNP Detail
Alliance Variant		 Chr18:77063949 Katnal2 mRNA-UTR
Rr541073 1883 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs51121747
MGI SNP Detail
Alliance Variant		 Chr18:77064027 Katnal2 mRNA-UTR
Rr541073 1805 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A C C A A A A A A A A A A A A
rs230216042
MGI SNP Detail
Alliance Variant		 Chr18:77064032 Katnal2 mRNA-UTR
Rr541073 1800 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs249212652
MGI SNP Detail
Alliance Variant		 Chr18:77064049 Katnal2 mRNA-UTR
Rr541073 1783 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs218446674
MGI SNP Detail
Alliance Variant		 Chr18:77064057 Katnal2 mRNA-UTR
Rr541073 1775 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G
rs48466253
MGI SNP Detail
Alliance Variant		 Chr18:77064066 Katnal2 mRNA-UTR
Rr541073 1766 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G A G A G G G G G A G A G G G G A G G G G A G G G G G G G
rs262263047
MGI SNP Detail
Alliance Variant		 Chr18:77064069 Katnal2 mRNA-UTR
Rr541073 1763 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs581451771
MGI SNP Detail
Alliance Variant		 Chr18:77064090 Katnal2 mRNA-UTR
Rr541073 1742 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs51356953
MGI SNP Detail
Alliance Variant		 Chr18:77064192 Katnal2 mRNA-UTR
Rr541073 1640 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs248527668
MGI SNP Detail
Alliance Variant		 Chr18:77064279 Katnal2 mRNA-UTR
Rr541073 1553 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs260595885
MGI SNP Detail
Alliance Variant		 Chr18:77064357 Katnal2 mRNA-UTR
Rr541073 1475 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs47775287
MGI SNP Detail
Alliance Variant		 Chr18:77064377 Katnal2 mRNA-UTR
Rr541073 1455 bp proximal
 SNP A/C/G C C C G G G G G C G C G G G G G G G A C G G C C G G G G C G C G G G G G G G C G G G G G G G G G G C C
rs587156284
MGI SNP Detail
Alliance Variant		 Chr18:77064383 Katnal2 mRNA-UTR
Rr541073 1449 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G
rs237051392
MGI SNP Detail
Alliance Variant		 Chr18:77064402 Katnal2 mRNA-UTR
Rr541073 1430 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256687128
MGI SNP Detail
Alliance Variant		 Chr18:77064404 Katnal2 mRNA-UTR
Rr541073 1428 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs230419261
MGI SNP Detail
Alliance Variant		 Chr18:77064406 Katnal2 mRNA-UTR
Rr541073 1426 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs581302918
MGI SNP Detail
Alliance Variant		 Chr18:77064421 Katnal2 mRNA-UTR
Rr541073 1411 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs46033718
MGI SNP Detail
Alliance Variant		 Chr18:77064430 Katnal2 mRNA-UTR
Rr541073 1402 bp proximal
 SNP A/C/T C C C C C C C C C C C C C C C C C C C C C C T C C T C T C C C C T C T C C C T T C C C C T C A C C C C
rs265552369
MGI SNP Detail
Alliance Variant		 Chr18:77064443 Katnal2 mRNA-UTR
Rr541073 1389 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T C T T T T T T T T T T T T
rs232403610
MGI SNP Detail
Alliance Variant		 Chr18:77064466 Katnal2 mRNA-UTR
Rr541073 1366 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs259285096
MGI SNP Detail
Alliance Variant		 Chr18:77064556 Katnal2 mRNA-UTR
Rr541073 1276 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs578678339
MGI SNP Detail
Alliance Variant		 Chr18:77064592 Katnal2 mRNA-UTR
Rr541073 1240 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C C C T C T C C C C T C C C C T C C C C C C C
rs217576267
MGI SNP Detail
Alliance Variant		 Chr18:77064598 Katnal2 mRNA-UTR
Rr541073 1234 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs387300279
MGI SNP Detail
Alliance Variant		 Chr18:77064616 Katnal2 mRNA-UTR
Rr541073 1216 bp proximal
 SNP A/G A G G G G G A G A G G G G G A G A A G G G A G G G G G G G G G G G G G A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs578435055
MGI SNP Detail
Alliance Variant		 Chr18:77064623 Katnal2 mRNA-UTR
Rr541073 1209 bp proximal
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs585532016
MGI SNP Detail
Alliance Variant		 Chr18:77064627 Katnal2 mRNA-UTR
Rr541073 1205 bp proximal
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs586032976
MGI SNP Detail
Alliance Variant		 Chr18:77064683 Katnal2 mRNA-UTR
Rr541073 1149 bp proximal
 SNP A/G G A A A A A G A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A
rs579363097
MGI SNP Detail
Alliance Variant		 Chr18:77064687 Katnal2 mRNA-UTR
Rr541073 1145 bp proximal
 SNP A/G G A A A A A G A A A A A A A A G A A A A A A A A A A A A A A A A A A A A
rs582521113
MGI SNP Detail
Alliance Variant		 Chr18:77064691 Katnal2 mRNA-UTR
Rr541073 1141 bp proximal
 SNP A/G G A A A A A G A G A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A
rs586199088
MGI SNP Detail
Alliance Variant		 Chr18:77064701 Katnal2 mRNA-UTR
Rr541073 1131 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs579545362
MGI SNP Detail
Alliance Variant		 Chr18:77064703 Katnal2 mRNA-UTR
Rr541073 1129 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A G A A A A
rs29678692
MGI SNP Detail
Alliance Variant		 Chr18:77064864 Katnal2 mRNA-UTR
Katnal2 Noncoding-Transcript-Variant
Rr541073 968 bp proximal
 SNP A/G G A
rs243329510
MGI SNP Detail
Alliance Variant		 Chr18:77064876 Katnal2 mRNA-UTR
Katnal2 Noncoding-Transcript-Variant
Rr541073 956 bp proximal
 SNP A/G/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A G A A A A
rs46330201
MGI SNP Detail
Alliance Variant		 Chr18:77064926 Katnal2 mRNA-UTR
Katnal2 Noncoding-Transcript-Variant
Rr541073 906 bp proximal
 SNP C/T C C C T T T T T C T C C T T T T T T T T C T C C C C T C T T T C T C T C T T T T C T T T T C T T C T T C C
rs239316256
MGI SNP Detail
Alliance Variant		 Chr18:77064984 Katnal2 mRNA-UTR
Katnal2 Noncoding-Transcript-Variant
Rr541073 848 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs257594084
MGI SNP Detail
Alliance Variant		 Chr18:77065257 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541073 575 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs223931312
MGI SNP Detail
Alliance Variant		 Chr18:77065258 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541073 574 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs582287814
MGI SNP Detail
Alliance Variant		 Chr18:77065263 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541073 569 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs48769855
MGI SNP Detail
Alliance Variant		 Chr18:77065265 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541073 567 bp proximal
 SNP C/T C T
rs254077151
MGI SNP Detail
Alliance Variant		 Chr18:77065269 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541073 563 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs585308007
MGI SNP Detail
Alliance Variant		 Chr18:77065272 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541073 560 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs30121522
MGI SNP Detail
Alliance Variant		 Chr18:77065365 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541073 467 bp proximal
 SNP C/T T C C T
rs30209420
MGI SNP Detail
Alliance Variant		 Chr18:77065413 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541073 419 bp proximal
 SNP A/G G A A G
rs256654326
MGI SNP Detail
Alliance Variant		 Chr18:77065419 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541073 413 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30016577
MGI SNP Detail
Alliance Variant		 Chr18:77065423 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541073 409 bp proximal
 SNP A/C A C C A
rs246737055
MGI SNP Detail
Alliance Variant		 Chr18:77065471 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541073 361 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs29823538
MGI SNP Detail
Alliance Variant		 Chr18:77065473 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541073 359 bp proximal
 SNP C/T T C C T
rs233335170
MGI SNP Detail
Alliance Variant		 Chr18:77065515 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541073 317 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30072722
MGI SNP Detail
Alliance Variant		 Chr18:77065516 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541073 316 bp proximal
 SNP A/G A G G A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs387753753
MGI SNP Detail
Alliance Variant		 Chr18:77065533 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541073 299 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C A C A C C C C A C A C C C C A C C C C A C C C C C C C
rs259996199
MGI SNP Detail
Alliance Variant		 Chr18:77065542 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541073 290 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223840031
MGI SNP Detail
Alliance Variant		 Chr18:77065547 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541073 285 bp proximal
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs243384533
MGI SNP Detail
Alliance Variant		 Chr18:77065554 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541073 278 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs213997217
MGI SNP Detail
Alliance Variant		 Chr18:77065557 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541073 275 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs237244574
MGI SNP Detail
Alliance Variant		 Chr18:77065599 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541073 233 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257615307
MGI SNP Detail
Alliance Variant		 Chr18:77065625 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541073 207 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T A T T T T T T T T T A T T T A T T T T A T T A T T T T
rs215392704
MGI SNP Detail
Alliance Variant		 Chr18:77065738 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541072 within coordinates of
Rr541073 94 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs29717875
MGI SNP Detail
Alliance Variant		 Chr18:77065743 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541072 within coordinates of
Rr541073 89 bp proximal
 SNP A/C C A A C
rs254042507
MGI SNP Detail
Alliance Variant		 Chr18:77065752 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541072 within coordinates of
Rr541073 80 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs580604372
MGI SNP Detail
Alliance Variant		 Chr18:77065819 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541072 within coordinates of
Rr541073 13 bp proximal
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs217141186
MGI SNP Detail
Alliance Variant		 Chr18:77065832 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541072 within coordinates of
Rr541073 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs46849962
MGI SNP Detail
Alliance Variant		 Chr18:77065859 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541072 within coordinates of
Rr541073 6 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T C T T T T T T T T T C T T C T T T T
rs29722068
MGI SNP Detail
Alliance Variant		 Chr18:77065871 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541072 within coordinates of
Rr541073 18 bp distal
 SNP A/G A G G A
rs222113742
MGI SNP Detail
Alliance Variant		 Chr18:77065892 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541072 within coordinates of
Rr541073 39 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs29556613
MGI SNP Detail
Alliance Variant		 Chr18:77065902 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541072 within coordinates of
Rr541073 49 bp distal
 SNP A/G G A A G
rs262851546
MGI SNP Detail
Alliance Variant		 Chr18:77065910 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541072 within coordinates of
Rr541073 57 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225142139
MGI SNP Detail
Alliance Variant		 Chr18:77065919 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541072 within coordinates of
Rr541073 66 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs387153748
MGI SNP Detail
Alliance Variant		 Chr18:77065944 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541072 within coordinates of
Rr541073 91 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G A G G G G G G G G G A G G G G G G G
rs241034594
MGI SNP Detail
Alliance Variant		 Chr18:77066017 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541072 within coordinates of
Rr541073 164 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs260057423
MGI SNP Detail
Alliance Variant		 Chr18:77066050 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541072 within coordinates of
Rr541073 197 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs223528434
MGI SNP Detail
Alliance Variant		 Chr18:77066091 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541072 within coordinates of
Rr541073 238 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs45721359
MGI SNP Detail
Alliance Variant		 Chr18:77066247 Katnal2 Intron
Katnal2 mRNA-UTR
Katnal2 Noncoding-Transcript-Variant
Rr541073 394 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C T C C C C C C C C C T C C C C C C C
rs236789351
MGI SNP Detail
Alliance Variant		 Chr18:77066257 Katnal2 Intron
Katnal2 mRNA-UTR
Katnal2 Noncoding-Transcript-Variant
Rr541073 404 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G A G G G G G G G G A G G G G
rs262546249
MGI SNP Detail
Alliance Variant		 Chr18:77066274 Katnal2 Intron
Katnal2 mRNA-UTR
Katnal2 Noncoding-Transcript-Variant
Rr541073 421 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs231651789
MGI SNP Detail
Alliance Variant		 Chr18:77066286 Katnal2 Intron
Katnal2 mRNA-UTR
Katnal2 Noncoding-Transcript-Variant
Rr541073 433 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs252536580
MGI SNP Detail
Alliance Variant		 Chr18:77066421 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541073 568 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs48073815
MGI SNP Detail
Alliance Variant		 Chr18:77066431 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541073 578 bp distal
 SNP A/G A G
rs50851764
MGI SNP Detail
Alliance Variant		 Chr18:77066438 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541073 585 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C T C C C C C C C C C T C C C C C C C C C C C C C
rs45965782
MGI SNP Detail
Alliance Variant		 Chr18:77066444 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541073 591 bp distal
 SNP A/C A A A C C C C C A C A A C C C C C C C C A C A A A A C A C C C A C A C A C C C C A C C C C A C C C C C A
rs30117077
MGI SNP Detail
Alliance Variant		 Chr18:77066445 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541073 592 bp distal
 SNP A/G A G G
rs48137696
MGI SNP Detail
Alliance Variant		 Chr18:77066463 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541073 610 bp distal
 SNP A/T A T
rs50122833
MGI SNP Detail
Alliance Variant		 Chr18:77066492 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541073 639 bp distal
 SNP A/G G G G A A A A A G A G G A A A A A A A A G A G G G G A G A A A G A G A G A A A A G A A A A G A A A A A G G
rs48676869
MGI SNP Detail
Alliance Variant		 Chr18:77066506 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541073 653 bp distal
 SNP A/G A A A G G G G G A G A A G G G G G G G G A G A A A A G A G A G A G A G A G G G A A G G G G A G G G G G A A
rs239010850
MGI SNP Detail
Alliance Variant		 Chr18:77066509 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541073 656 bp distal
 SNP A/C/G C C C C C C C C C C C C C C C C C C C A C C C C C C C C C G C C C C C C C C C G C C C C C C C C G C C C C
rs48428421
MGI SNP Detail
Alliance Variant		 Chr18:77066526 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541073 673 bp distal
 SNP A/G G G G A A A A A G A G G A A A A A A A G G A G G G G A G A G A G A G A G A A A G G A A A A G A A G A A G G
rs224990159
MGI SNP Detail
Alliance Variant		 Chr18:77066528 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541073 675 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs49341525
MGI SNP Detail
Alliance Variant		 Chr18:77066552 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541073 699 bp distal
 SNP A/G G G G A A A A A G A G G A A A A A A A G G A G G G G A G A G A G A G A G A A A G G A A A A G A A G A A G G
rs253318306
MGI SNP Detail
Alliance Variant		 Chr18:77066595 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541073 742 bp distal
 SNP C/T T T T C C C C C T C T T C C C C C C C C T C T T T T C T C C C T C T C T C C C C T C C C C T C C C C C T
rs218125390
MGI SNP Detail
Alliance Variant		 Chr18:77066596 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541073 743 bp distal
 SNP A/G G G G A A A A A G A G G A A A A A A A A G A G G G G A G A A A G A G A G A A A A G A A A A G A A A A A G
rs236751107
MGI SNP Detail
Alliance Variant		 Chr18:77066607 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541073 754 bp distal
 SNP A/C A A A C C C C C A C A A C C C C C C C A A C A A A A C A C A C A C A C A C C C A A C C C C A C C A C C A A
rs265098554
MGI SNP Detail
Alliance Variant		 Chr18:77066626 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541073 773 bp distal
 SNP A/G/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T
rs108924255
MGI SNP Detail
Alliance Variant		 Chr18:77066627 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541073 774 bp distal
 SNP G G
rs231263267
MGI SNP Detail
Alliance Variant		 Chr18:77066688 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541073 835 bp distal
 SNP C/T T T C C C C C T C T T C C C C C C C C T C T T T C T C C C T C C T C C C C T C C C C T C C C C C T
rs580944768
MGI SNP Detail
Alliance Variant		 Chr18:77066701 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541073 848 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G
rs248453137
MGI SNP Detail
Alliance Variant		 Chr18:77066705 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541073 852 bp distal
 SNP C/T C C T T T T T C T C C T T T T T T T T C T C C T T T T C T T T T T T C T T T T C T T T T T
rs584371766
MGI SNP Detail
Alliance Variant		 Chr18:77066723 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541073 870 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C
rs586549001
MGI SNP Detail
Alliance Variant		 Chr18:77066724 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541073 871 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A
rs580593502
MGI SNP Detail
Alliance Variant		 Chr18:77066730 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541073 877 bp distal
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs584344835
MGI SNP Detail
Alliance Variant		 Chr18:77066772 Katnal2 Intron
Katnal2 Noncoding-Transcript-Variant
Rr541073 919 bp distal
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
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Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory