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Mouse SNP Summary
Symbol
Name
ID
Rr542430
regulatory region 542430
MGI:8004562

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Showing SNP(s) 1 - 57 of 57

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs260209285
MGI SNP Detail
Alliance Variant
Chr19:3599933 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 1916 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs217802032
MGI SNP Detail
Alliance Variant
Chr19:3599954 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 1895 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs586801497
MGI SNP Detail
Alliance Variant
Chr19:3600088 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 1761 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs51907894
MGI SNP Detail
Alliance Variant
Chr19:3600120 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 1729 bp proximal
SNP A/T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs220020324
MGI SNP Detail
Alliance Variant
Chr19:3600156 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 1693 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A C A A A A A A A A A A A A C A A A C A A A C A A A C C
rs231481786
MGI SNP Detail
Alliance Variant
Chr19:3600185 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 1664 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs36465720
MGI SNP Detail
Alliance Variant
Chr19:3600191 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 1658 bp proximal
SNP A/G A A A A A A A A A G A A G A
rs250095698
MGI SNP Detail
Alliance Variant
Chr19:3600225 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 1624 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs217890932
MGI SNP Detail
Alliance Variant
Chr19:3600315 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 1534 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237612758
MGI SNP Detail
Alliance Variant
Chr19:3600350 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 1499 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs38751212
MGI SNP Detail
Alliance Variant
Chr19:3600538 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 1311 bp proximal
SNP C/T C C C C C C T C T C T C T T T
rs30860790
MGI SNP Detail
Alliance Variant
Chr19:3600550 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 1299 bp proximal
SNP C/G G G C C C G C G C C G C C C C C C
rs37118796
MGI SNP Detail
Alliance Variant
Chr19:3600654 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 1195 bp proximal
SNP A/C C C C C C C A C A C C C A C A
rs37270621
MGI SNP Detail
Alliance Variant
Chr19:3600774 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 1075 bp proximal
SNP A/C C C C C C C C C C C A C C A C
rs31007602
MGI SNP Detail
Alliance Variant
Chr19:3601086 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 763 bp proximal
SNP C/G C C G G G C G C C G C C G C G C C G C
rs237799054
MGI SNP Detail
Alliance Variant
Chr19:3601087 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 762 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254681543
MGI SNP Detail
Alliance Variant
Chr19:3601141 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 708 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T G T T T T T T T T T T G T T T G T T T G T T T T G
rs579979820
MGI SNP Detail
Alliance Variant
Chr19:3601156 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 693 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs223590445
MGI SNP Detail
Alliance Variant
Chr19:3601185 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 664 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254800007
MGI SNP Detail
Alliance Variant
Chr19:3601219 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 630 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs218034890
MGI SNP Detail
Alliance Variant
Chr19:3601306 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 543 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31075539
MGI SNP Detail
Alliance Variant
Chr19:3601399 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 450 bp proximal
SNP A/T T A T A A A
rs257095051
MGI SNP Detail
Alliance Variant
Chr19:3601407 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 442 bp proximal
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs214318527
MGI SNP Detail
Alliance Variant
Chr19:3601408 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 441 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T A T T T T T T T T T T A T T T A T T T A T T T T A A
rs30741114
MGI SNP Detail
Alliance Variant
Chr19:3601489 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 360 bp proximal
SNP A/G A A G G G A G A A G A A G G A G A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs583066376
MGI SNP Detail
Alliance Variant
Chr19:3601516 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 333 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs586674671
MGI SNP Detail
Alliance Variant
Chr19:3601520 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 329 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs250228837
MGI SNP Detail
Alliance Variant
Chr19:3601591 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 258 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs211859714
MGI SNP Detail
Alliance Variant
Chr19:3601633 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 216 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs242627375
MGI SNP Detail
Alliance Variant
Chr19:3601671 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 178 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259951522
MGI SNP Detail
Alliance Variant
Chr19:3601828 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 21 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226585419
MGI SNP Detail
Alliance Variant
Chr19:3601852 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246933825
MGI SNP Detail
Alliance Variant
Chr19:3601869 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C A C A C C C C C A C C C C A C A C A C C C A C C C C A A
rs580564791
MGI SNP Detail
Alliance Variant
Chr19:3601870 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs585311438
MGI SNP Detail
Alliance Variant
Chr19:3601885 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs251473558
MGI SNP Detail
Alliance Variant
Chr19:3601888 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T C T C T T T T T C T T T T C T C T C T T T C T C T T C C
rs587576654
MGI SNP Detail
Alliance Variant
Chr19:3601891 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs220308360
MGI SNP Detail
Alliance Variant
Chr19:3602167 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 144 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237735686
MGI SNP Detail
Alliance Variant
Chr19:3602389 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 366 bp distal
SNP C/G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T C T T T T T T T T T T T C T T T T T T T C T T T T
rs581608596
MGI SNP Detail
Alliance Variant
Chr19:3602442 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 419 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs585075533
MGI SNP Detail
Alliance Variant
Chr19:3602444 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 421 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs578951915
MGI SNP Detail
Alliance Variant
Chr19:3602458 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 435 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs582198084
MGI SNP Detail
Alliance Variant
Chr19:3602477 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 454 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs254752917
MGI SNP Detail
Alliance Variant
Chr19:3602519 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 496 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs223647902
MGI SNP Detail
Alliance Variant
Chr19:3602751 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 728 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C C C C C C
rs36286787
MGI SNP Detail
Alliance Variant
Chr19:3602792 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 769 bp distal
SNP C/T T T T T T T T T T T C T T C T
rs264082747
MGI SNP Detail
Alliance Variant
Chr19:3602957 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 934 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C T C C C C C C C C C C C C T C C C T C C C T C C C T T
rs233054966
MGI SNP Detail
Alliance Variant
Chr19:3603126 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 1103 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs30557840
MGI SNP Detail
Alliance Variant
Chr19:3603220 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 1197 bp distal
SNP A/G G G A A A G A G A A A G A A A A A A A A
rs37780385
MGI SNP Detail
Alliance Variant
Chr19:3603377 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 1354 bp distal
SNP A/G G G G G G G G G G G A G G A G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs46436259
MGI SNP Detail
Alliance Variant
Chr19:3603436 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 1413 bp distal
SNP A/G G G G A
rs225606069
MGI SNP Detail
Alliance Variant
Chr19:3603445 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 1422 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs244172309
MGI SNP Detail
Alliance Variant
Chr19:3603542 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 1519 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs211798517
MGI SNP Detail
Alliance Variant
Chr19:3603728 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 1705 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G A G G G G G G G G G G G A G G G A G G G A G G G G A A
rs30373179
MGI SNP Detail
Alliance Variant
Chr19:3603743 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 1720 bp distal
SNP C/T C C T T T C T C C T C C T C T C C T C
rs6278616
MGI SNP Detail
Alliance Variant
Chr19:3603868 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 1845 bp distal
SNP C/G C G
rs216345718
MGI SNP Detail
Alliance Variant
Chr19:3603962 Ppp6r3 Intron
Ppp6r3 Noncoding-Transcript-Variant
Rr542430 1939 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 57 of 57

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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory