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Mouse SNP Summary
Symbol
Name
ID 		Rr542473
regulatory region 542473
MGI:8004605

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs213409301
MGI SNP Detail
Alliance Variant		 Chr19:3727466 Gm59007 within coordinates of
Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 1985 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227912246
MGI SNP Detail
Alliance Variant		 Chr19:3727488 Gm59007 within coordinates of
Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 1963 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs260276301
MGI SNP Detail
Alliance Variant		 Chr19:3727642 Gm59007 within coordinates of
Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 1809 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218185098
MGI SNP Detail
Alliance Variant		 Chr19:3727676 Gm59007 within coordinates of
Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 1775 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs233552437
MGI SNP Detail
Alliance Variant		 Chr19:3727703 Gm59007 within coordinates of
Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 1748 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251243320
MGI SNP Detail
Alliance Variant		 Chr19:3727776 Gm59007 within coordinates of
Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 1675 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs214387577
MGI SNP Detail
Alliance Variant		 Chr19:3727803 Gm59007 within coordinates of
Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 1648 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs231268814
MGI SNP Detail
Alliance Variant		 Chr19:3727831 Gm59007 within coordinates of
Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 1620 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs256172442
MGI SNP Detail
Alliance Variant		 Chr19:3727880 Gm59007 within coordinates of
Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 1571 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs30396399
MGI SNP Detail
Alliance Variant		 Chr19:3727928 Gm59007 within coordinates of
Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 1523 bp proximal
 SNP C/T T C T T
rs248156116
MGI SNP Detail
Alliance Variant		 Chr19:3727929 Gm59007 within coordinates of
Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 1522 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs583344899
MGI SNP Detail
Alliance Variant		 Chr19:3727998 Gm59007 within coordinates of
Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 1453 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs586323278
MGI SNP Detail
Alliance Variant		 Chr19:3728024 Gm59007 within coordinates of
Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 1427 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs580804724
MGI SNP Detail
Alliance Variant		 Chr19:3728031 Gm59007 within coordinates of
Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 1420 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs263611926
MGI SNP Detail
Alliance Variant		 Chr19:3728046 Gm59007 within coordinates of
Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 1405 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A A A A A A A A G A A A A
rs221528357
MGI SNP Detail
Alliance Variant		 Chr19:3728047 Gm59007 within coordinates of
Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 1404 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G G G G G G G G A G G G G
rs582877244
MGI SNP Detail
Alliance Variant		 Chr19:3728053 Gm59007 within coordinates of
Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 1398 bp proximal
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs241593304
MGI SNP Detail
Alliance Variant		 Chr19:3728137 Gm59007 within coordinates of
Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 1314 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs259452914
MGI SNP Detail
Alliance Variant		 Chr19:3728152 Gm59007 within coordinates of
Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 1299 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G C G G G G
rs226950151
MGI SNP Detail
Alliance Variant		 Chr19:3728292 Gm59007 within coordinates of
Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 1159 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs246246933
MGI SNP Detail
Alliance Variant		 Chr19:3728313 Gm59007 within coordinates of
Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 1138 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs39001353
MGI SNP Detail
Alliance Variant		 Chr19:3728353 Gm59007 within coordinates of
Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 1098 bp proximal
 SNP A/G A A A A A A G A A A A A G A G
rs228424417
MGI SNP Detail
Alliance Variant		 Chr19:3728390 Gm59007 within coordinates of
Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 1061 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254919732
MGI SNP Detail
Alliance Variant		 Chr19:3728397 Gm59007 within coordinates of
Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 1054 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs265942229
MGI SNP Detail
Alliance Variant		 Chr19:3728398 Gm59007 within coordinates of
Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 1053 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs227601923
MGI SNP Detail
Alliance Variant		 Chr19:3728399 Gm59007 within coordinates of
Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 1052 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs245341661
MGI SNP Detail
Alliance Variant		 Chr19:3728422 Gm59007 within coordinates of
Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 1029 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs214351608
MGI SNP Detail
Alliance Variant		 Chr19:3728492 Gm59007 within coordinates of
Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 959 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231411264
MGI SNP Detail
Alliance Variant		 Chr19:3728514 Gm59007 within coordinates of
Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 937 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253984891
MGI SNP Detail
Alliance Variant		 Chr19:3728590 Gm59007 within coordinates of
Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 861 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs211957957
MGI SNP Detail
Alliance Variant		 Chr19:3728955 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 496 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242780070
MGI SNP Detail
Alliance Variant		 Chr19:3728984 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 467 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T C T T T T C T C T T T T T T T C T T C C
rs260076100
MGI SNP Detail
Alliance Variant		 Chr19:3728989 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 462 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs221592636
MGI SNP Detail
Alliance Variant		 Chr19:3729042 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 409 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs233397559
MGI SNP Detail
Alliance Variant		 Chr19:3729068 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 383 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251691630
MGI SNP Detail
Alliance Variant		 Chr19:3729096 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 355 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs220602627
MGI SNP Detail
Alliance Variant		 Chr19:3729104 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 347 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs243651601
MGI SNP Detail
Alliance Variant		 Chr19:3729119 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 332 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs264932362
MGI SNP Detail
Alliance Variant		 Chr19:3729195 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 256 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs36771434
MGI SNP Detail
Alliance Variant		 Chr19:3729323 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 128 bp proximal
 SNP A/G G G G G G G G G G G G G G A G
rs251751990
MGI SNP Detail
Alliance Variant		 Chr19:3729359 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 92 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259152011
MGI SNP Detail
Alliance Variant		 Chr19:3729430 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 21 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C
rs227757212
MGI SNP Detail
Alliance Variant		 Chr19:3729456 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs245307470
MGI SNP Detail
Alliance Variant		 Chr19:3729457 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs256439746
MGI SNP Detail
Alliance Variant		 Chr19:3729550 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs225240208
MGI SNP Detail
Alliance Variant		 Chr19:3729579 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs249919117
MGI SNP Detail
Alliance Variant		 Chr19:3729641 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs212042210
MGI SNP Detail
Alliance Variant		 Chr19:3729773 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 15 bp distal
 SNP C/T C C C C C C C C C C C C C C C C T T C T C C T C C T C T C C C C C T C T C C T C T C T C C C T C T C C T T
rs240141810
MGI SNP Detail
Alliance Variant		 Chr19:3729849 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 91 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs259109153
MGI SNP Detail
Alliance Variant		 Chr19:3729862 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 104 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T T T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs215664818
MGI SNP Detail
Alliance Variant		 Chr19:3729896 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 138 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs233632334
MGI SNP Detail
Alliance Variant		 Chr19:3729971 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 213 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs251644052
MGI SNP Detail
Alliance Variant		 Chr19:3729980 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 222 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs219326574
MGI SNP Detail
Alliance Variant		 Chr19:3729987 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 229 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238561839
MGI SNP Detail
Alliance Variant		 Chr19:3729996 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 238 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs256626242
MGI SNP Detail
Alliance Variant		 Chr19:3730059 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 301 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs220553053
MGI SNP Detail
Alliance Variant		 Chr19:3730067 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 309 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs38294363
MGI SNP Detail
Alliance Variant		 Chr19:3730122 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 364 bp distal
 SNP A/G A A A A A A A A A A G A A G A
rs578626146
MGI SNP Detail
Alliance Variant		 Chr19:3730216 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 458 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs38028644
MGI SNP Detail
Alliance Variant		 Chr19:3730219 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 461 bp distal
 SNP A/G G G G G G G G G G G G G G A G
rs36766763
MGI SNP Detail
Alliance Variant		 Chr19:3730291 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 533 bp distal
 SNP A/C C C C C C C C C C C A C C A C
rs221545036
MGI SNP Detail
Alliance Variant		 Chr19:3730369 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 611 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs38648627
MGI SNP Detail
Alliance Variant		 Chr19:3730370 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 612 bp distal
 SNP C/T T T T T T T T T T T C T T C T
rs256391550
MGI SNP Detail
Alliance Variant		 Chr19:3730382 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 624 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230110869
MGI SNP Detail
Alliance Variant		 Chr19:3730508 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 750 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs37646423
MGI SNP Detail
Alliance Variant		 Chr19:3730557 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 799 bp distal
 SNP A/T A A A A A A T A A A A A T A T
rs36394816
MGI SNP Detail
Alliance Variant		 Chr19:3730559 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 801 bp distal
 SNP A/C A A A A A A A A A A C A A C A
rs37077699
MGI SNP Detail
Alliance Variant		 Chr19:3730582 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 824 bp distal
 SNP C/T T T T T T T C T T C T C C C
rs37087660
MGI SNP Detail
Alliance Variant		 Chr19:3730805 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 1047 bp distal
Rr542474 within coordinates of
 SNP C/T C C C C C C C C C C T C C T C
rs38735774
MGI SNP Detail
Alliance Variant		 Chr19:3730870 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 1112 bp distal
Rr542474 within coordinates of
 SNP C/T C C C C C C C C C C T C C T C
rs227129943
MGI SNP Detail
Alliance Variant		 Chr19:3730873 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 1115 bp distal
Rr542474 within coordinates of
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs581991160
MGI SNP Detail
Alliance Variant		 Chr19:3730880 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 1122 bp distal
Rr542474 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs585121270
MGI SNP Detail
Alliance Variant		 Chr19:3730888 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 1130 bp distal
Rr542474 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs245560426
MGI SNP Detail
Alliance Variant		 Chr19:3730919 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 1161 bp distal
Rr542474 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs36758410
MGI SNP Detail
Alliance Variant		 Chr19:3730950 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 1192 bp distal
Rr542474 within coordinates of
 SNP A/G G G G G G G G G G G A G G A G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs235121490
MGI SNP Detail
Alliance Variant		 Chr19:3731073 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 1315 bp distal
Rr542474 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs260643056
MGI SNP Detail
Alliance Variant		 Chr19:3731097 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 1339 bp distal
Rr542474 within coordinates of
 SNP A/G/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T T G T T T T
rs212364426
MGI SNP Detail
Alliance Variant		 Chr19:3731105 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 1347 bp distal
Rr542474 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs243542143
MGI SNP Detail
Alliance Variant		 Chr19:3731139 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 1381 bp distal
Rr542474 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs252804959
MGI SNP Detail
Alliance Variant		 Chr19:3731155 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 1397 bp distal
Rr542474 within coordinates of
 SNP A/C/G A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A C A A A A A A C A A A A A A A G A A A A
rs221648028
MGI SNP Detail
Alliance Variant		 Chr19:3731156 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 1398 bp distal
Rr542474 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs239395711
MGI SNP Detail
Alliance Variant		 Chr19:3731227 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 1469 bp distal
Rr542474 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs250609186
MGI SNP Detail
Alliance Variant		 Chr19:3731241 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 1483 bp distal
Rr542474 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs222331544
MGI SNP Detail
Alliance Variant		 Chr19:3731277 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 1519 bp distal
Rr542474 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs242240470
MGI SNP Detail
Alliance Variant		 Chr19:3731543 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 1785 bp distal
Rr542474 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs264675539
MGI SNP Detail
Alliance Variant		 Chr19:3731749 Lrp5 Intron
Lrp5 Noncoding-Transcript-Variant
Rr542473 1991 bp distal
Rr542474 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
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Showing SNP(s) 1 - 86 of 86
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory
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