Rr542542 Mouse SNP Summary

Mouse SNP Summary

Symbol
Name
ID

Rr542542
regulatory region 542542
MGI:8004674

<< first < prev1 next > last >>
Showing SNP(s) 1 - 95 of 95

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.

Show only selected strains with alleles Show all selected strains
Drag columns to re-order.

Column order is reset with Filter or Show option change.

Export:

SNPs to Text File

SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs37761509 MGI SNP Detail Alliance Variant	Chr19:3943202	Chka Intron Chka Noncoding-Transcript-Variant Rr542542 1854 bp proximal	SNP	A/T		A		A	A		A		A			A								A					A	A			A					T	A				A		T												A
rs223898609 MGI SNP Detail Alliance Variant	Chr19:3943293	Chka Intron Chka Noncoding-Transcript-Variant Rr542542 1763 bp proximal	SNP	A/T	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	T	A	A	A	A
rs36285707 MGI SNP Detail Alliance Variant	Chr19:3943296	Chka Intron Chka Noncoding-Transcript-Variant Rr542542 1760 bp proximal	SNP	A/C		C		C	C		C		C			C								C					C	C			C					A	C				C		A												C
rs261537860 MGI SNP Detail Alliance Variant	Chr19:3943302	Chka Intron Chka Noncoding-Transcript-Variant Rr542542 1754 bp proximal	SNP	A/G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs228772455 MGI SNP Detail Alliance Variant	Chr19:3943421	Chka mRNA-UTR Chka Noncoding-Transcript-Variant Rr542542 1635 bp proximal	SNP	A/G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs247558339 MGI SNP Detail Alliance Variant	Chr19:3943422	Chka mRNA-UTR Chka Noncoding-Transcript-Variant Rr542542 1634 bp proximal	SNP	C/T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs216043460 MGI SNP Detail Alliance Variant	Chr19:3943472	Chka mRNA-UTR Chka Noncoding-Transcript-Variant Rr542542 1584 bp proximal	SNP	C/T	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs239229640 MGI SNP Detail Alliance Variant	Chr19:3943493	Chka mRNA-UTR Chka Noncoding-Transcript-Variant Rr542542 1563 bp proximal	SNP	A/G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs250856181 MGI SNP Detail Alliance Variant	Chr19:3943512	Chka mRNA-UTR Chka Noncoding-Transcript-Variant Rr542542 1544 bp proximal	SNP	C/T	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs37064355 MGI SNP Detail Alliance Variant	Chr19:3943739	Chka mRNA-UTR Chka Noncoding-Transcript-Variant Rr542541 within coordinates of Rr542542 1317 bp proximal	SNP	C/G		G		G	G		G		G			G								G					G	G			G					C	G				G		C												G
rs230027156 MGI SNP Detail Alliance Variant	Chr19:3943811	Chka mRNA-UTR Chka Noncoding-Transcript-Variant Rr542541 within coordinates of Rr542542 1245 bp proximal	SNP	C/T	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs579820489 MGI SNP Detail Alliance Variant	Chr19:3943934	Chka mRNA-UTR Chka Noncoding-Transcript-Variant Rr542541 within coordinates of Rr542542 1122 bp proximal	SNP	C/T	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs583194675 MGI SNP Detail Alliance Variant	Chr19:3943959	Chka mRNA-UTR Chka Noncoding-Transcript-Variant Rr542541 within coordinates of Rr542542 1097 bp proximal	SNP	C/T	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs36597187 MGI SNP Detail Alliance Variant	Chr19:3943965	Chka mRNA-UTR Chka Noncoding-Transcript-Variant Rr542541 within coordinates of Rr542542 1091 bp proximal	SNP	C/T		C		C	C		C		C			C								C					C	C			C					T	C				C		C												C
rs253168519 MGI SNP Detail Alliance Variant	Chr19:3943981	Chka mRNA-UTR Chka Noncoding-Transcript-Variant Rr542541 within coordinates of Rr542542 1075 bp proximal	SNP	G/T	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G		T	G	G	G	G
rs221905564 MGI SNP Detail Alliance Variant	Chr19:3943995	Chka mRNA-UTR Chka Noncoding-Transcript-Variant Rr542541 within coordinates of Rr542542 1061 bp proximal	SNP	A/G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G		G	G	G	G	G		G	G	G	G	G	G			G	G	G	G	G	G		A	G	G	G	G
rs233550653 MGI SNP Detail Alliance Variant	Chr19:3944106	Chka mRNA-UTR Chka Noncoding-Transcript-Variant Rr542542 950 bp proximal	SNP	C/T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T		C	T	T	T	T
rs36571609 MGI SNP Detail Alliance Variant	Chr19:3944274	Chka mRNA-UTR Chka Noncoding-Transcript-Variant Rr542542 782 bp proximal	SNP	A/T		T		T	T		T		T			T								T					T	T			T					A	T				T		A												T
rs262855504 MGI SNP Detail	Chr19:3944425	Rr542542 631 bp proximal	SNP	A/G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs38708347 MGI SNP Detail	Chr19:3944446	Rr542542 610 bp proximal	SNP	C/T		C		C	C		C		C			C								C					C	C			C					T	C				C		T												C
rs38498288 MGI SNP Detail	Chr19:3944553	Rr542542 503 bp proximal	SNP	C/G		C		C	C		C		C			C								C					C	C			C					G	C				C		G												C
rs38366622 MGI SNP Detail	Chr19:3944627	Rr542542 429 bp proximal	SNP	A/G		A		A	A		A		A			A								A					A	A			A					G	A				A		G												A
rs37750071 MGI SNP Detail	Chr19:3944654	Rr542542 402 bp proximal	SNP	A/T		A		A	A		A		A			A								A					A	A			A					T	A				A		T												A
rs217880553 MGI SNP Detail	Chr19:3944709	Rr542542 347 bp proximal	SNP	C/T	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs242423736 MGI SNP Detail	Chr19:3944832	Rr542542 224 bp proximal	SNP	A/G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	G	A	A	A	A	A	G	A	A	A	A	A	A		G	A	A	A	A	A	A	A	G	A	A	A	A
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs260366518 MGI SNP Detail	Chr19:3944850	Rr542542 206 bp proximal	SNP	A/G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	A	G	G	G	G	G	A	G	G	G	G	G	G		A	G	G	G	G	G	G	G	G	G	G	G	G
rs387872509 MGI SNP Detail	Chr19:3944856	Rr542542 200 bp proximal	SNP	C/T	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C	C	T	C	C	C	C		C	C	T	C	C	C	T	C	C	C	C	C	C
rs228885320 MGI SNP Detail	Chr19:3944864	Rr542542 192 bp proximal	SNP	C/T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	C	T	T	T	T	T	C	T	T	T	T	T	T		C	T	T	T	T	T	T	T	C	T	T	T	T
rs579512251 MGI SNP Detail	Chr19:3944868	Rr542542 188 bp proximal	SNP	C/T	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs253507512 MGI SNP Detail	Chr19:3944884	Rr542542 172 bp proximal	SNP	A/G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	A	G	G	G	G	G	A	G	G	G	G	G	G		A	G	G	G	G	G	G	G	G	G	G	G	G
rs387224063 MGI SNP Detail	Chr19:3944923	Rr542542 133 bp proximal	SNP	A/G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	A	G	G	G	G		G	G	A	G	G	G	A	G	G	G	G	G	G
rs265583319 MGI SNP Detail	Chr19:3945034	Rr542542 22 bp proximal	SNP	A/C	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	C	A	A	A	A
rs231142742 MGI SNP Detail	Chr19:3945035	Rr542542 21 bp proximal	SNP	G/T	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	T	G	G	G	G
rs255499138 MGI SNP Detail	Chr19:3945036	Rr542542 20 bp proximal	SNP	C/T	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	T	C	C	C	C	C	T	C	C	C	C	C	C		T	C	C	C	C	C	C	C	T	C	C	C	C
rs212965303 MGI SNP Detail	Chr19:3945056	Rr542542 within coordinates of	SNP	A/G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs230065156 MGI SNP Detail	Chr19:3945058	Rr542542 within coordinates of	SNP	A/T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	A	T	T	T	T
rs247564320 MGI SNP Detail	Chr19:3945069	Rr542542 within coordinates of	SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C		C	C	C	C
rs216731440 MGI SNP Detail	Chr19:3945129	Rr542542 within coordinates of	SNP	A/G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A		A	A	A	A	A	A	A	A	A	A	A	G	A
rs37765684 MGI SNP Detail	Chr19:3945162	Rr542542 within coordinates of	SNP	C/T		C		C	C		C		C			C								C					C	C			C					T	C				C		T												C
rs38011627 MGI SNP Detail	Chr19:3945165	Rr542542 within coordinates of	SNP	C/T		T		T	T		T		T			T								C					T	T			T					T	T				C		T												C
rs587084326 MGI SNP Detail	Chr19:3945222	Rr542542 within coordinates of	SNP	A/G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs215018951 MGI SNP Detail	Chr19:3945232	Rr542542 within coordinates of	SNP	A/C	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	C	A	A	A	A	C	A	A	A	A	A	C	A	A	A	A	A	A		C	A	A	A	A	A	A	A	A	A	A	A	A
rs36764443 MGI SNP Detail	Chr19:3945233	Rr542542 within coordinates of	SNP	A/G		A		A	A		A		A			A								A					A	G			A						A				A														A
rs36849791 MGI SNP Detail	Chr19:3945241	Rr542542 within coordinates of	SNP	A/G		G		G	G		G		G			G								A					G	G			G						G				A														A
rs261378178 MGI SNP Detail	Chr19:3945255	Rr542542 within coordinates of	SNP	A/C	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	C	A	A	A	A	C	A	A	A	A	A	C	A	A	A	A	A	A		C	A	A	A	A	A	A	A	C	A	A	A	A
rs217911788 MGI SNP Detail	Chr19:3945283	Rr542542 within coordinates of	SNP	A/C	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	C	A	A	A	A
rs37370569 MGI SNP Detail	Chr19:3945297	Rr542542 within coordinates of	SNP	C/G		C		C	C		C		C			C								C					C	C			C					G	C				C		G												C
rs36301497 MGI SNP Detail	Chr19:3945332	Rr542542 within coordinates of	SNP	A/T		A		A	A		A		A			A								A					A	A			A					T	A				A		T												A
rs37394670 MGI SNP Detail	Chr19:3945379	Rr542542 within coordinates of	SNP	C/T		T		T	T		T		T			T								T					T	T			T					C	T				T		C												T
rs249639400 MGI SNP Detail	Chr19:3945428	Rr542542 within coordinates of	SNP	C/T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs263346757 MGI SNP Detail	Chr19:3945441	Rr542542 within coordinates of	SNP	G/T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	G	T	T	T	T
rs231510632 MGI SNP Detail	Chr19:3945445	Rr542542 within coordinates of	SNP	C/G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	C	G	G	G	G
rs243405349 MGI SNP Detail	Chr19:3945498	Rr542542 within coordinates of	SNP	A/G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs36631417 MGI SNP Detail	Chr19:3945540	Rr542542 within coordinates of	SNP	A/G		G		G	G		G		G			G								A					G	G			G					G	G				A		G												A
rs36620957 MGI SNP Detail	Chr19:3945690	Rr542542 within coordinates of	SNP	C/T		T		T	T		T		T			T								T					T	T			T					C	T				T		C												T
rs247603575 MGI SNP Detail	Chr19:3945754	Rr542542 within coordinates of	SNP	C/T	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs36256245 MGI SNP Detail	Chr19:3945756	Rr542542 2 bp distal	SNP	A/T		A		A	A		A		A			A								T					A	A			A					A	A				T		A												T
rs232424093 MGI SNP Detail	Chr19:3945774	Rr542542 20 bp distal	SNP	A/T	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	T	A	A	A	A
rs257247653 MGI SNP Detail	Chr19:3945790	Rr542542 36 bp distal	SNP	C/T	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs214691173 MGI SNP Detail	Chr19:3945890	Rr542542 136 bp distal	SNP	G/T	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	T	G	G	G	G
rs237908503 MGI SNP Detail	Chr19:3945902	Rr542542 148 bp distal	SNP	C/T	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	T	C	C	C	C	C	T	C	C	C	C	C	C		T	C	C	C	C	C	C	C	T	C	C	C	C
rs256187499 MGI SNP Detail	Chr19:3945903	Rr542542 149 bp distal	SNP	A/T	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	T	A	A	A	A	T	A	A	A	A	A	T	A	A	A	A	A	A		T	A	A	A	A	A	A	A	T	A	A	A	A
rs211920340 MGI SNP Detail	Chr19:3945911	Rr542542 157 bp distal	SNP	A/G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs37111208 MGI SNP Detail	Chr19:3945992	Rr542542 238 bp distal	SNP	G/T		G		G	G		G		G			G								G					G	G			G					G	G				G		T												G
rs37451850 MGI SNP Detail	Chr19:3946044	Rr542542 290 bp distal	SNP	A/G		A		A	A		A		A			A								A					A	A			A					G	A				A		G												A
rs221500646 MGI SNP Detail Alliance Variant	Chr19:3946197	Rr542542 443 bp distal Tcirg1 Intron Tcirg1 Splice-Site	SNP	A/G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs244705762 MGI SNP Detail Alliance Variant	Chr19:3946386	Rr542542 632 bp distal Tcirg1 Coding-Synonymous Tcirg1 mRNA-UTR	SNP	A/G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G		A	G	G	G	G
rs263109620 MGI SNP Detail Alliance Variant	Chr19:3946431	Rr542542 677 bp distal Tcirg1 Coding-Synonymous Tcirg1 mRNA-UTR	SNP	A/C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C		A	C	C	C	C
rs223856551 MGI SNP Detail Alliance Variant	Chr19:3946506	Rr542542 752 bp distal Tcirg1 Intron	SNP	G/T	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	T	G	G	G	G
rs246384426 MGI SNP Detail Alliance Variant	Chr19:3946526	Rr542542 772 bp distal Tcirg1 Intron	SNP	A/G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs254903721 MGI SNP Detail Alliance Variant	Chr19:3946533	Rr542542 779 bp distal Tcirg1 Intron	SNP	C/T	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs223700940 MGI SNP Detail Alliance Variant	Chr19:3946550	Rr542542 796 bp distal Tcirg1 Intron	SNP	A/T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	A	T	T	T	T
rs241752030 MGI SNP Detail Alliance Variant	Chr19:3946588	Rr542542 834 bp distal Tcirg1 Intron	SNP	A/G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G		A	G	G	G	G
rs259162369 MGI SNP Detail Alliance Variant	Chr19:3946759	Rr542542 1005 bp distal Tcirg1 Intron	SNP	A/G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs233212266 MGI SNP Detail Alliance Variant	Chr19:3946771	Rr542542 1017 bp distal Tcirg1 Intron	SNP	C/T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	C	T	T	T	T	T	C	T	T	T	T	T	T		C	T	T	T	T	T	T	T	C	T	T	T	T
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs252299653 MGI SNP Detail Alliance Variant	Chr19:3946891	Rr542542 1137 bp distal Tcirg1 Coding-Synonymous Tcirg1 mRNA-UTR	SNP	A/C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C		A	C	C	C	C
rs215238312 MGI SNP Detail Alliance Variant	Chr19:3946914	Rr542542 1160 bp distal Tcirg1 Intron	SNP	C/T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T		C	T	T	T	T
rs229950544 MGI SNP Detail Alliance Variant	Chr19:3946920	Rr542542 1166 bp distal Tcirg1 Intron	SNP	C/T	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C		T	C	C	C	C
rs244231829 MGI SNP Detail Alliance Variant	Chr19:3946988	Rr542542 1234 bp distal Tcirg1 Intron	SNP	C/T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	C	T	T	T	T	T	C	T	T	T	T	T	T		C	T	T	T	T	T	T		T	T	T	T	T
rs211962679 MGI SNP Detail Alliance Variant	Chr19:3946992	Rr542542 1238 bp distal Tcirg1 Intron	SNP	C/T	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C		T	C	C	C	C
rs236221886 MGI SNP Detail Alliance Variant	Chr19:3947006	Rr542542 1252 bp distal Tcirg1 Intron Tcirg1 Splice-Site	SNP	G/T	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G		T	G	G	G	G
rs37494469 MGI SNP Detail Alliance Variant	Chr19:3947209	Rr542542 1455 bp distal Tcirg1 Intron	SNP	A/G		G		G	G		G		G			G								G					G	G			G					G	G				G		A												G
rs37674345 MGI SNP Detail Alliance Variant	Chr19:3947291	Rr542542 1537 bp distal Tcirg1 Intron	SNP	A/G		A		A	A		A		A			A								A					A	G			A					A	A				A		A												A
rs583352603 MGI SNP Detail Alliance Variant	Chr19:3947438	Rr542542 1684 bp distal Tcirg1 Intron	SNP	A/G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs38073667 MGI SNP Detail Alliance Variant	Chr19:3947448	Rr542542 1694 bp distal Tcirg1 Intron	SNP	A/G		A		A	A		A		A			A								A					A	A			A					G	A				A		G												A
rs587097575 MGI SNP Detail Alliance Variant	Chr19:3947450	Rr542542 1696 bp distal Tcirg1 Intron	SNP	C/T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs580969302 MGI SNP Detail Alliance Variant	Chr19:3947456	Rr542542 1702 bp distal Tcirg1 Intron	SNP	G/T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	G	T	T	T	T
rs221682854 MGI SNP Detail Alliance Variant	Chr19:3947493	Rr542542 1739 bp distal Tcirg1 Coding-NonSynonymous Tcirg1 Intron Tcirg1 mRNA-UTR	SNP	C/G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		C	G	G	G	G	G	G	G	G	G	G	G	G
rs36704949 MGI SNP Detail Alliance Variant	Chr19:3947498	Rr542542 1744 bp distal Tcirg1 Coding-NonSynonymous Tcirg1 Intron Tcirg1 mRNA-UTR	SNP	C/G		G		G	G		G		G			G								G					G	G			G					C	G				G														G
rs249251648 MGI SNP Detail Alliance Variant	Chr19:3947501	Rr542542 1747 bp distal Tcirg1 Coding-Synonymous Tcirg1 Intron Tcirg1 mRNA-UTR	SNP	C/T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs218215826 MGI SNP Detail Alliance Variant	Chr19:3947540	Rr542542 1786 bp distal Tcirg1 Coding-Synonymous Tcirg1 Intron Tcirg1 mRNA-UTR Tssr157405 within coordinates of	SNP	A/G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs241785049 MGI SNP Detail Alliance Variant	Chr19:3947573	Rr542542 1819 bp distal Tcirg1 Coding-NonSynonymous Tcirg1 Intron Tcirg1 mRNA-UTR Tssr157405 within coordinates of	SNP	A/T	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A		T	A	A	A	A
rs259202421 MGI SNP Detail Alliance Variant	Chr19:3947618	Rr542542 1864 bp distal Tcirg1 Coding-Synonymous Tcirg1 Intron Tcirg1 mRNA-UTR	SNP	A/G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A		G	A	A	A	A
rs37198699 MGI SNP Detail Alliance Variant	Chr19:3947668	Rr542542 1914 bp distal Tcirg1 Coding-NonSynonymous Tcirg1 Intron Tcirg1 mRNA-UTR	SNP	A/C		C		C	C		C		C			C								C					C	A			C					C	C				C		C												C
rs225191306 MGI SNP Detail Alliance Variant	Chr19:3947721	Rr542542 1967 bp distal Tcirg1 Intron	SNP	A/G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A

<< first < prev1 next > last >>
Showing SNP(s) 1 - 95 of 95

Filter

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 03/25/2025 MGI 6.24