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Mouse SNP Summary
Symbol
Name
ID 		Rr546626
regulatory region 546626
MGI:8008758

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SNP Density Heatmap
Chr19 from 33,201,615 bp to 33,205,636 bp
(4,022 bp)
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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs261736084
MGI SNP Detail		 Chr19:33201660 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 1955 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs50568316
MGI SNP Detail		 Chr19:33201741 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 1874 bp proximal
 SNP A/G A A A A A A G A A A G A A G A
rs51072685
MGI SNP Detail		 Chr19:33201864 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 1751 bp proximal
 SNP A/G G G G G G G G G G G A G G G G
rs50309144
MGI SNP Detail		 Chr19:33202021 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 1594 bp proximal
 SNP A/T A A A A A A T A A A T A A T A
rs260940088
MGI SNP Detail		 Chr19:33202031 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 1584 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs49444487
MGI SNP Detail		 Chr19:33202194 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 1421 bp proximal
 SNP C/T C C C C C C T C C C T C C C C
rs240229508
MGI SNP Detail		 Chr19:33202202 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 1413 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs46194892
MGI SNP Detail		 Chr19:33202206 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 1409 bp proximal
 SNP C/T T T T T T T C T T T C T T C T
rs229988955
MGI SNP Detail		 Chr19:33202382 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 1233 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs249764747
MGI SNP Detail		 Chr19:33202383 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 1232 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs46065574
MGI SNP Detail		 Chr19:33202388 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 1227 bp proximal
 SNP A/C C C C C C C C C A C C C C C C
rs49012890
MGI SNP Detail		 Chr19:33202404 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 1211 bp proximal
 SNP C/T C C C C C C T C C C T C C T C
rs233752360
MGI SNP Detail		 Chr19:33202424 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 1191 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A A A A A C A A A A A A A C A A A A
rs246649488
MGI SNP Detail		 Chr19:33202426 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 1189 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs215922685
MGI SNP Detail		 Chr19:33202530 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 1085 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs50995425
MGI SNP Detail		 Chr19:33202570 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 1045 bp proximal
 SNP A/G G G G G G G A G G G A G G G G
rs251334942
MGI SNP Detail		 Chr19:33202571 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 1044 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs214938359
MGI SNP Detail		 Chr19:33202572 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 1043 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs238360354
MGI SNP Detail		 Chr19:33202608 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 1007 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs256458297
MGI SNP Detail		 Chr19:33202609 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 1006 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs49271549
MGI SNP Detail		 Chr19:33202638 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 977 bp proximal
 SNP G/T G G G G G G G G G T G G G G
rs243035198
MGI SNP Detail		 Chr19:33202642 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 973 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T
rs49621691
MGI SNP Detail		 Chr19:33202655 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 960 bp proximal
 SNP C/T C C C C C C T C C C T C C C C
rs222258382
MGI SNP Detail		 Chr19:33202659 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 956 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240190761
MGI SNP Detail		 Chr19:33202684 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 931 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs265211061
MGI SNP Detail		 Chr19:33202794 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 821 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs222273532
MGI SNP Detail		 Chr19:33202806 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 809 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs244711562
MGI SNP Detail		 Chr19:33202810 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 805 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs261340187
MGI SNP Detail		 Chr19:33202844 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 771 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234805692
MGI SNP Detail		 Chr19:33202976 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 639 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs47186712
MGI SNP Detail		 Chr19:33203006 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 609 bp proximal
 SNP C/T T T T T T T C T T T C T T T T
rs48896271
MGI SNP Detail		 Chr19:33203029 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 586 bp proximal
 SNP C/T T T T T T T C T T T C T T C T
rs50427934
MGI SNP Detail		 Chr19:33203107 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 508 bp proximal
 SNP A/G G G G G G G A G G G A G G A G
rs582152651
MGI SNP Detail		 Chr19:33203116 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 499 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs586217577
MGI SNP Detail		 Chr19:33203160 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 455 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs52043147
MGI SNP Detail		 Chr19:33203178 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 437 bp proximal
 SNP C/T C C C C C C C C C C C C C T C
rs48851469
MGI SNP Detail		 Chr19:33203191 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 424 bp proximal
 SNP C/T C C C C C C C C C C C C C T C
rs236284695
MGI SNP Detail		 Chr19:33203232 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 383 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs48861749
MGI SNP Detail		 Chr19:33203256 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 359 bp proximal
 SNP A/G A A A A A A G A A A G A A G A
rs212213898
MGI SNP Detail		 Chr19:33203259 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 356 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A
rs236657146
MGI SNP Detail		 Chr19:33203301 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 314 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C C C C C C C C A C C C C C C C C C C C C
rs254757394
MGI SNP Detail		 Chr19:33203330 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 285 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs47294576
MGI SNP Detail		 Chr19:33203348 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 267 bp proximal
 SNP G/T T T T T T T G T T T G T T G T
rs51647818
MGI SNP Detail		 Chr19:33203350 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 265 bp proximal
 SNP A/G G A G
rs51438359
MGI SNP Detail		 Chr19:33203445 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 170 bp proximal
 SNP A/G A A A A A A A A A A A G A
rs258235592
MGI SNP Detail		 Chr19:33203450 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 165 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T
rs49763407
MGI SNP Detail		 Chr19:33203496 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 119 bp proximal
 SNP C/T T T T T T T C T T T C T T C T
rs241836384
MGI SNP Detail		 Chr19:33203505 Rnls within coordinates of
Rr364670 within coordinates of
Rr546625 within coordinates of
Rr546626 110 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs264534580
MGI SNP Detail		 Chr19:33203620 Rnls within coordinates of
Rr364670 within coordinates of
Rr546625 within coordinates of
Rr546626 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs222491712
MGI SNP Detail		 Chr19:33203621 Rnls within coordinates of
Rr364670 within coordinates of
Rr546625 within coordinates of
Rr546626 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs240705649
MGI SNP Detail		 Chr19:33203652 Rnls within coordinates of
Rr364670 within coordinates of
Rr546625 within coordinates of
Rr546626 16 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs258010618
MGI SNP Detail		 Chr19:33203659 Rnls within coordinates of
Rr364670 within coordinates of
Rr546625 within coordinates of
Rr546626 23 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs226728249
MGI SNP Detail		 Chr19:33203667 Rnls within coordinates of
Rr364670 within coordinates of
Rr546625 within coordinates of
Rr546626 31 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T T T T T T T T A T T T T T T T T T T T T
rs244507079
MGI SNP Detail		 Chr19:33203682 Rnls within coordinates of
Rr364670 within coordinates of
Rr546625 within coordinates of
Rr546626 46 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs262362272
MGI SNP Detail		 Chr19:33203683 Rnls within coordinates of
Rr364670 within coordinates of
Rr546625 within coordinates of
Rr546626 47 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G G G G G G G G T G G G G G G G G G G G G
rs230262794
MGI SNP Detail		 Chr19:33203694 Rnls within coordinates of
Rr364670 within coordinates of
Rr546625 within coordinates of
Rr546626 58 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs249990667
MGI SNP Detail		 Chr19:33203701 Rnls within coordinates of
Rr364670 within coordinates of
Rr546625 within coordinates of
Rr546626 65 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs212457289
MGI SNP Detail		 Chr19:33203753 Rnls within coordinates of
Rr364670 within coordinates of
Rr546625 within coordinates of
Rr546626 117 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236619056
MGI SNP Detail		 Chr19:33203776 Rnls within coordinates of
Rr364670 within coordinates of
Rr546625 within coordinates of
Rr546626 140 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs248185257
MGI SNP Detail		 Chr19:33203840 Rnls within coordinates of
Rr364670 within coordinates of
Rr546625 within coordinates of
Rr546626 204 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs216138962
MGI SNP Detail		 Chr19:33203845 Rnls within coordinates of
Rr364670 within coordinates of
Rr546625 within coordinates of
Rr546626 209 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs234276825
MGI SNP Detail		 Chr19:33203875 Rnls within coordinates of
Rr364670 within coordinates of
Rr546625 within coordinates of
Rr546626 239 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262646306
MGI SNP Detail		 Chr19:33203883 Rnls within coordinates of
Rr364670 within coordinates of
Rr546625 within coordinates of
Rr546626 247 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs46404369
MGI SNP Detail		 Chr19:33203926 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 290 bp distal
 SNP C/T C C C C C C T C C C T C C C C
rs49749461
MGI SNP Detail		 Chr19:33203947 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 311 bp distal
 SNP C/T T T T T T T C T T T C T T C T
rs236822562
MGI SNP Detail		 Chr19:33203962 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 326 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs579994893
MGI SNP Detail		 Chr19:33204048 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 412 bp distal
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs583781303
MGI SNP Detail		 Chr19:33204066 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 430 bp distal
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs107677329
MGI SNP Detail		 Chr19:33204107 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 471 bp distal
 SNP T T T
rs255218957
MGI SNP Detail		 Chr19:33204121 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 485 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C T C C T C C C C C C C T C C C C C C C C C C C C C C C
rs52218302
MGI SNP Detail		 Chr19:33204150 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 514 bp distal
 SNP C/T C C C C C C T C C C T C C C
rs586322608
MGI SNP Detail		 Chr19:33204153 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 517 bp distal
 SNP A/C/G G G G G G G G G G G G G G G G G G G G G G G A G G G G C G G G G G G G G G G G G A G G G G G G G G G G G
rs240564726
MGI SNP Detail		 Chr19:33204158 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 522 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs108914754
MGI SNP Detail		 Chr19:33204168 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 532 bp distal
 SNP G G G G
rs251760209
MGI SNP Detail		 Chr19:33204179 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 543 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs49224833
MGI SNP Detail		 Chr19:33204229 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 593 bp distal
 SNP A/G A A A A A A A A A A A A A G A
rs243994860
MGI SNP Detail		 Chr19:33204245 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 609 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs265058660
MGI SNP Detail		 Chr19:33204369 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 733 bp distal
Rr546627 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G G G G G G G G C G G G G G G G C G G G G
rs228773722
MGI SNP Detail		 Chr19:33204375 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 739 bp distal
Rr546627 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G G G G G G G G C G G G G G G G G G G G G
rs245113789
MGI SNP Detail		 Chr19:33204418 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 782 bp distal
Rr546627 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256058423
MGI SNP Detail		 Chr19:33204456 Rnls within coordinates of
Rr364670 within coordinates of
Rr405925 within coordinates of
Rr546626 820 bp distal
Rr546627 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs229305869
MGI SNP Detail		 Chr19:33204523 Rnls within coordinates of
Rr364670 within coordinates of
Rr405925 within coordinates of
Rr546626 887 bp distal
Rr546627 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs248146939
MGI SNP Detail		 Chr19:33204531 Rnls within coordinates of
Rr364670 within coordinates of
Rr405925 within coordinates of
Rr546626 895 bp distal
Rr546627 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs216099535
MGI SNP Detail		 Chr19:33204539 Rnls within coordinates of
Rr364670 within coordinates of
Rr405925 within coordinates of
Rr546626 903 bp distal
Rr546627 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs50982182
MGI SNP Detail		 Chr19:33204553 Rnls within coordinates of
Rr364670 within coordinates of
Rr405925 within coordinates of
Rr546626 917 bp distal
Rr546627 within coordinates of
 SNP C/G G G G G G G C G G G C G G G G
rs227617331
MGI SNP Detail		 Chr19:33204590 Rnls within coordinates of
Rr364670 within coordinates of
Rr405925 within coordinates of
Rr546626 954 bp distal
Rr546627 within coordinates of
Rr546628 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs251810049
MGI SNP Detail		 Chr19:33204624 Rnls within coordinates of
Rr364670 within coordinates of
Rr405925 within coordinates of
Rr546626 988 bp distal
Rr546627 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214624964
MGI SNP Detail		 Chr19:33204663 Rnls within coordinates of
Rr364670 within coordinates of
Rr405925 within coordinates of
Rr546626 1027 bp distal
Rr546627 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs46219398
MGI SNP Detail		 Chr19:33204664 Rnls within coordinates of
Rr364670 within coordinates of
Rr405925 within coordinates of
Rr546626 1028 bp distal
Rr546627 within coordinates of
 SNP A/C A A A A A A C A A A C A A C A
rs261195530
MGI SNP Detail		 Chr19:33204776 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 1140 bp distal
Rr546627 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs217058345
MGI SNP Detail		 Chr19:33204777 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 1141 bp distal
Rr546627 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs234006862
MGI SNP Detail		 Chr19:33204828 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 1192 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs251725013
MGI SNP Detail		 Chr19:33204829 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 1193 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs51283347
MGI SNP Detail		 Chr19:33204844 Rnls within coordinates of
Rr364670 within coordinates of
Rr546626 1208 bp distal
 SNP A/C A A A A A A A A A A A A A C A
rs246709180
MGI SNP Detail		 Chr19:33204914 Rnls within coordinates of
Rr546626 1278 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs257008690
MGI SNP Detail		 Chr19:33204968 Rnls within coordinates of
Rr546626 1332 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs220923128
MGI SNP Detail		 Chr19:33204987 Rnls within coordinates of
Rr546626 1351 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241091740
MGI SNP Detail		 Chr19:33204991 Rnls within coordinates of
Rr546626 1355 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261264778
MGI SNP Detail		 Chr19:33205060 Rnls within coordinates of
Rr546626 1424 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs46034221
MGI SNP Detail		 Chr19:33205161 Rnls within coordinates of
Rr546626 1525 bp distal
 SNP A/G G G G G G G G G G G G G G A G
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Showing SNP(s) 1 - 100 of 112
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
07/22/2025
MGI 6.24 		The Jackson Laboratory