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Mouse SNP Summary
Symbol
Name
ID
Rr546778
regulatory region 546778
MGI:8008910

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Showing SNP(s) 1 - 51 of 51

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs37791947
MGI SNP Detail
Alliance Variant
Chr19:34687183 Rr546778 1957 bp proximal
Slc16a12 Intron
SNP A/G A A G A A A G
rs37342431
MGI SNP Detail
Alliance Variant
Chr19:34687291 Rr546778 1849 bp proximal
Slc16a12 Intron
SNP A/T T T T A T A
rs31056727
MGI SNP Detail
Alliance Variant
Chr19:34687295 Rr546778 1845 bp proximal
Slc16a12 Intron
SNP A/G G A G G G A G G G
rs36303567
MGI SNP Detail
Alliance Variant
Chr19:34687418 Rr546778 1722 bp proximal
Slc16a12 Intron
SNP C/T C C C C T C C C
rs37610371
MGI SNP Detail
Alliance Variant
Chr19:34687476 Gm18425 within coordinates of
Rr546778 1664 bp proximal
Slc16a12 Intron
SNP A/G G A G G G A
rs39476703
MGI SNP Detail
Alliance Variant
Chr19:34687590 Gm18425 within coordinates of
Rr546778 1550 bp proximal
Slc16a12 Intron
SNP A/G G A G G G A A
rs36479723
MGI SNP Detail
Alliance Variant
Chr19:34687787 Gm18425 within coordinates of
Rr546778 1353 bp proximal
Slc16a12 Intron
SNP C/G G G G G G C G G G G
rs37499451
MGI SNP Detail
Alliance Variant
Chr19:34687872 Gm18425 within coordinates of
Rr546778 1268 bp proximal
Slc16a12 Intron
SNP C/T T T T T C T T T T
rs38143508
MGI SNP Detail
Alliance Variant
Chr19:34687903 Gm18425 within coordinates of
Rr546778 1237 bp proximal
Slc16a12 Intron
SNP C/T T T T T T T C T T T T T T
rs36774949
MGI SNP Detail
Alliance Variant
Chr19:34688010 Gm18425 within coordinates of
Rr546778 1130 bp proximal
Slc16a12 Intron
SNP A/G A A A A G A A A A
rs241701858
MGI SNP Detail
Alliance Variant
Chr19:34688151 Gm18425 within coordinates of
Rr546778 989 bp proximal
Slc16a12 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs36782034
MGI SNP Detail
Alliance Variant
Chr19:34688192 Gm18425 within coordinates of
Rr546778 948 bp proximal
Slc16a12 Intron
SNP A/G A A A A G A A A A A
rs36351857
MGI SNP Detail
Alliance Variant
Chr19:34688231 Gm18425 within coordinates of
Rr546778 909 bp proximal
Slc16a12 Intron
SNP G/T T T T T G T T T T
rs37558704
MGI SNP Detail
Alliance Variant
Chr19:34688293 Gm18425 within coordinates of
Rr546778 847 bp proximal
Slc16a12 Intron
SNP A/G G G G G G A G G G G G
rs578887700
MGI SNP Detail
Alliance Variant
Chr19:34688366 Rr546778 774 bp proximal
Slc16a12 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs38150543
MGI SNP Detail
Alliance Variant
Chr19:34688462 Rr546778 678 bp proximal
Slc16a12 Intron
SNP A/T T T T T T T A T T T T T
rs230608032
MGI SNP Detail
Alliance Variant
Chr19:34688717 Rr546778 423 bp proximal
Slc16a12 Intron
SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A
rs250279856
MGI SNP Detail
Alliance Variant
Chr19:34688765 Rr546778 375 bp proximal
Slc16a12 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs52202101
MGI SNP Detail
Alliance Variant
Chr19:34689332 Rr546778 within coordinates of
Slc16a12 Intron
SNP C/G G C
rs30451213
MGI SNP Detail
Chr19:34689357 Rr546778 within coordinates of
Slc16a12 within coordinates of
SNP C/G G G C G G
rs582639291
MGI SNP Detail
Alliance Variant
Chr19:34689364 Rr546778 within coordinates of
Slc16a12 Intron
SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C C C C C C C G G G C C C C C C C C C C
rs586179063
MGI SNP Detail
Alliance Variant
Chr19:34689368 Rr546778 within coordinates of
Slc16a12 Intron
SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C C C C C C C G G G C C C C C C C C C C
rs37012194
MGI SNP Detail
Alliance Variant
Chr19:34689450 Rr546778 within coordinates of
Slc16a12 Intron
SNP A/G A A A A G A A A A A
rs247766490
MGI SNP Detail
Alliance Variant
Chr19:34689604 Rr546778 within coordinates of
Slc16a12 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs386998265
MGI SNP Detail
Alliance Variant
Chr19:34689728 Rr546778 within coordinates of
Slc16a12 Intron
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs36716326
MGI SNP Detail
Alliance Variant
Chr19:34689996 Rr546778 within coordinates of
Slc16a12 Intron
SNP A/T A A A A T A A A A
rs233447653
MGI SNP Detail
Alliance Variant
Chr19:34690082 Rr546778 5 bp distal
Slc16a12 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T T T C C C C C C C C C C
rs31284252
MGI SNP Detail
Alliance Variant
Chr19:34690213 Rr546778 136 bp distal
Slc16a12 Intron
SNP A/G G A G G A G
rs222275646
MGI SNP Detail
Alliance Variant
Chr19:34690347 Rr546778 270 bp distal
Slc16a12 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs36606421
MGI SNP Detail
Alliance Variant
Chr19:34690405 Rr546778 328 bp distal
Slc16a12 Intron
SNP A/T T T T T A T T A T T T A
rs255487991
MGI SNP Detail
Alliance Variant
Chr19:34690518 Rr546778 441 bp distal
Slc16a12 Intron
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs226966079
MGI SNP Detail
Alliance Variant
Chr19:34690520 Rr546778 443 bp distal
Slc16a12 Intron
SNP A/T A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A
rs240746245
MGI SNP Detail
Alliance Variant
Chr19:34690522 Rr546778 445 bp distal
Slc16a12 Intron
SNP A/T A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A
rs252743323
MGI SNP Detail
Alliance Variant
Chr19:34690524 Rr546778 447 bp distal
Slc16a12 Intron
SNP A/T A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A
rs221585183
MGI SNP Detail
Alliance Variant
Chr19:34690546 Rr546778 469 bp distal
Slc16a12 Intron
SNP C/T T T T C T T T T T T T C T T C T T T C T T T T T T T C C T T T T
rs215676746
MGI SNP Detail
Alliance Variant
Chr19:34690551 Rr546778 474 bp distal
Slc16a12 Intron
SNP G/T G T
rs265296393
MGI SNP Detail
Alliance Variant
Chr19:34690585 Rr546778 508 bp distal
Slc16a12 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs36490342
MGI SNP Detail
Alliance Variant
Chr19:34690698 Rr546778 621 bp distal
Slc16a12 Intron
SNP A/C C C C C A C C C C
rs37008228
MGI SNP Detail
Alliance Variant
Chr19:34690970 Rr546778 893 bp distal
Slc16a12 Intron
SNP A/C A A A A C A A A C A A A
rs255865979
MGI SNP Detail
Alliance Variant
Chr19:34691012 Rr546778 935 bp distal
Slc16a12 Intron
SNP C/T T C
rs37101875
MGI SNP Detail
Alliance Variant
Chr19:34691022 Rr546778 945 bp distal
Slc16a12 Intron
SNP A/G A A A A G A A A A A
rs36496196
MGI SNP Detail
Alliance Variant
Chr19:34691056 Rr546778 979 bp distal
Slc16a12 Intron
SNP C/G G G G G G C G G G G G
rs248316412
MGI SNP Detail
Alliance Variant
Chr19:34691141 Rr546778 1064 bp distal
Slc16a12 Intron
SNP A/G A A A A A A A A A A A A A A A A G G G G A A G A A A A G A A A A A G A A A A A A G G G A A A A A A A A A A
rs30801592
MGI SNP Detail
Alliance Variant
Chr19:34691430 Rr546778 1353 bp distal
Slc16a12 Intron
SNP A/G G A G G A G
rs227091362
MGI SNP Detail
Alliance Variant
Chr19:34691497 Rr546778 1420 bp distal
Slc16a12 Intron
SNP A/G G G G G G G G G G G G G G G G G A A A A G G A G G G G A G G G G G A G G G G G G A A A G G G G G G G G G G
rs245535637
MGI SNP Detail
Alliance Variant
Chr19:34691571 Rr546778 1494 bp distal
Slc16a12 Intron
SNP C/T C C C C C C C C C C C C C C C C T T T T C C T C C C C T C C C C C T C C C C C C T T T C C C C C C C C C C
rs31226418
MGI SNP Detail
Alliance Variant
Chr19:34691618 Rr546778 1541 bp distal
Rr546779 within coordinates of
Slc16a12 Intron
SNP A/T A A T A T A
rs235190618
MGI SNP Detail
Alliance Variant
Chr19:34691661 Rr546778 1584 bp distal
Rr546779 within coordinates of
Slc16a12 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs248084944
MGI SNP Detail
Alliance Variant
Chr19:34691948 Rr546778 1871 bp distal
Rr546779 within coordinates of
Slc16a12 Intron
SNP A/G A G
rs217209087
MGI SNP Detail
Alliance Variant
Chr19:34691994 Rr546778 1917 bp distal
Rr546779 within coordinates of
Slc16a12 Intron
SNP A/G A G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs36562520
MGI SNP Detail
Alliance Variant
Chr19:34692000 Rr546778 1923 bp distal
Rr546779 within coordinates of
Slc16a12 Intron
SNP C/T T T T T C T T C T T T
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Showing SNP(s) 1 - 51 of 51

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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory

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