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Mouse SNP Summary
Symbol
Name
ID
Rr547579
regulatory region 547579
MGI:8009711

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Showing SNP(s) 1 - 69 of 69

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs212952681
MGI SNP Detail
Alliance Variant
Chr19:41223355 Rr547579 1952 bp proximal
Tm9sf3 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs37152745
MGI SNP Detail
Alliance Variant
Chr19:41223357 Rr547579 1950 bp proximal
Tm9sf3 Intron
SNP A/G G G G G G G G G G A G G A G
rs579782812
MGI SNP Detail
Alliance Variant
Chr19:41223525 Rr547579 1782 bp proximal
Tm9sf3 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs263757812
MGI SNP Detail
Alliance Variant
Chr19:41223542 Rr547579 1765 bp proximal
Tm9sf3 Intron
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs37519513
MGI SNP Detail
Alliance Variant
Chr19:41223784 Rr547579 1523 bp proximal
Tm9sf3 Intron
SNP C/T C C C C C C C C C C T C C T C
rs30317145
MGI SNP Detail
Alliance Variant
Chr19:41223813 Rr547579 1494 bp proximal
Tm9sf3 Intron
SNP A/G G A G A A A
rs259304027
MGI SNP Detail
Alliance Variant
Chr19:41223875 Rr547579 1432 bp proximal
Tm9sf3 Intron
SNP G/T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs219241877
MGI SNP Detail
Alliance Variant
Chr19:41223906 Rr547579 1401 bp proximal
Tm9sf3 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs238181610
MGI SNP Detail
Alliance Variant
Chr19:41223914 Rr547579 1393 bp proximal
Tm9sf3 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs247917271
MGI SNP Detail
Alliance Variant
Chr19:41223917 Rr547579 1390 bp proximal
Tm9sf3 Intron
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs37809422
MGI SNP Detail
Alliance Variant
Chr19:41224009 Rr547579 1298 bp proximal
Tm9sf3 Intron
SNP C/T T T T T T T T T T T T T T C T
rs246975611
MGI SNP Detail
Alliance Variant
Chr19:41224043 Rr547579 1264 bp proximal
Tm9sf3 Intron
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs37993159
MGI SNP Detail
Alliance Variant
Chr19:41224084 Rr547579 1223 bp proximal
Tm9sf3 Intron
SNP C/T C C C C C C C C C C C C C T C
rs231980103
MGI SNP Detail
Alliance Variant
Chr19:41224184 Rr547579 1123 bp proximal
Tm9sf3 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs249573298
MGI SNP Detail
Alliance Variant
Chr19:41224218 Rr547579 1089 bp proximal
Tm9sf3 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs257839687
MGI SNP Detail
Alliance Variant
Chr19:41224279 Rr547579 1028 bp proximal
Tm9sf3 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs37686712
MGI SNP Detail
Alliance Variant
Chr19:41224285 Rr547579 1022 bp proximal
Tm9sf3 Intron
SNP A/G A A A A A A G A A A A A A A A
rs243700489
MGI SNP Detail
Alliance Variant
Chr19:41224293 Rr547579 1014 bp proximal
Tm9sf3 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs37406310
MGI SNP Detail
Alliance Variant
Chr19:41224445 Rr547579 862 bp proximal
Tm9sf3 Intron
SNP C/T C C C C C C T C C C T C C T C
rs234223503
MGI SNP Detail
Alliance Variant
Chr19:41224619 Rr547579 688 bp proximal
Tm9sf3 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs37288667
MGI SNP Detail
Alliance Variant
Chr19:41224648 Rr547579 659 bp proximal
Tm9sf3 Intron
SNP C/T T T T T T T C T T T T T T C T
rs36762263
MGI SNP Detail
Alliance Variant
Chr19:41224675 Rr547579 632 bp proximal
Tm9sf3 Intron
SNP A/G A A A A A A G A A A A A A A A
rs237869963
MGI SNP Detail
Alliance Variant
Chr19:41224679 Rr547579 628 bp proximal
Tm9sf3 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs36370413
MGI SNP Detail
Alliance Variant
Chr19:41224712 Rr547579 595 bp proximal
Tm9sf3 Intron
SNP A/G G G G G G G A G G G A G G A G
rs38220770
MGI SNP Detail
Alliance Variant
Chr19:41224785 Rr547579 522 bp proximal
Tm9sf3 Intron
SNP C/T C C C C C C T C C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs231982138
MGI SNP Detail
Alliance Variant
Chr19:41224789 Rr547579 518 bp proximal
Tm9sf3 Intron
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs583707501
MGI SNP Detail
Alliance Variant
Chr19:41224805 Rr547579 502 bp proximal
Tm9sf3 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs37090121
MGI SNP Detail
Alliance Variant
Chr19:41224806 Rr547579 501 bp proximal
Tm9sf3 Intron
SNP A/G A A A A A A G A A A G A A A
rs37411950
MGI SNP Detail
Alliance Variant
Chr19:41224815 Rr547579 492 bp proximal
Tm9sf3 Intron
SNP C/G G G G G G G G G G C G G C G
rs30614863
MGI SNP Detail
Alliance Variant
Chr19:41224906 Rr547579 401 bp proximal
Tm9sf3 Intron
SNP A/G G A G G A G
rs260647172
MGI SNP Detail
Alliance Variant
Chr19:41224932 Rr547579 375 bp proximal
Tm9sf3 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs223729395
MGI SNP Detail
Alliance Variant
Chr19:41224949 Rr547579 358 bp proximal
Tm9sf3 Intron
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs246881530
MGI SNP Detail
Alliance Variant
Chr19:41224958 Rr547579 349 bp proximal
Tm9sf3 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs257878752
MGI SNP Detail
Alliance Variant
Chr19:41224999 Rr547579 308 bp proximal
Tm9sf3 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs38676977
MGI SNP Detail
Alliance Variant
Chr19:41225057 Rr547579 250 bp proximal
Tm9sf3 Intron
SNP A/G A A A A A A G A A A A A A A A
rs237528735
MGI SNP Detail
Alliance Variant
Chr19:41225083 Rr547579 224 bp proximal
Tm9sf3 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs37176579
MGI SNP Detail
Alliance Variant
Chr19:41225178 Rr547579 129 bp proximal
Tm9sf3 Intron
SNP A/C A A A A A A C A A A A A A A A
rs233262695
MGI SNP Detail
Alliance Variant
Chr19:41225234 Rr547579 73 bp proximal
Tm9sf3 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs260348346
MGI SNP Detail
Alliance Variant
Chr19:41225295 Rr547579 12 bp proximal
Tm9sf3 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs263227710
MGI SNP Detail
Alliance Variant
Chr19:41225356 Rr547579 28 bp distal
Tm9sf3 Intron
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs233132261
MGI SNP Detail
Alliance Variant
Chr19:41225451 Rr547579 123 bp distal
Tm9sf3 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs245965598
MGI SNP Detail
Alliance Variant
Chr19:41225613 Rr547579 285 bp distal
Tm9sf3 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213608804
MGI SNP Detail
Alliance Variant
Chr19:41225619 Rr547579 291 bp distal
Tm9sf3 Intron
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs37609926
MGI SNP Detail
Alliance Variant
Chr19:41225750 Rr547579 422 bp distal
Tm9sf3 Intron
SNP C/G G G G G G G C G G G G G G G G
rs232061167
MGI SNP Detail
Alliance Variant
Chr19:41225930 Rr547579 602 bp distal
Tm9sf3 Intron
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs242181556
MGI SNP Detail
Alliance Variant
Chr19:41225970 Rr547579 642 bp distal
Tm9sf3 Intron
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs213054272
MGI SNP Detail
Alliance Variant
Chr19:41226009 Rr547579 681 bp distal
Tm9sf3 Intron
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs239288505
MGI SNP Detail
Alliance Variant
Chr19:41226010 Rr547579 682 bp distal
Tm9sf3 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264063862
MGI SNP Detail
Alliance Variant
Chr19:41226064 Rr547579 736 bp distal
Tm9sf3 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs223910177
MGI SNP Detail
Alliance Variant
Chr19:41226181 Rr547579 853 bp distal
Tm9sf3 Intron
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs234442328
MGI SNP Detail
Alliance Variant
Chr19:41226230 Rr547579 902 bp distal
Tm9sf3 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs251606079
MGI SNP Detail
Alliance Variant
Chr19:41226255 Rr547579 927 bp distal
Tm9sf3 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs220618401
MGI SNP Detail
Alliance Variant
Chr19:41226291 Rr547579 963 bp distal
Tm9sf3 Intron
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs36805503
MGI SNP Detail
Alliance Variant
Chr19:41226304 Rr547579 976 bp distal
Tm9sf3 Intron
SNP C/T C C C C C C T C C C C C C C C
rs262092325
MGI SNP Detail
Alliance Variant
Chr19:41226417 Rr547579 1089 bp distal
Tm9sf3 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226483677
MGI SNP Detail
Alliance Variant
Chr19:41226539 Rr547579 1211 bp distal
Tm9sf3 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248521051
MGI SNP Detail
Alliance Variant
Chr19:41226550 Rr547579 1222 bp distal
Tm9sf3 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs38059466
MGI SNP Detail
Alliance Variant
Chr19:41226748 Rr547579 1420 bp distal
Tm9sf3 Intron
SNP C/T C C C C C C C C C C C C C T C
rs232492283
MGI SNP Detail
Alliance Variant
Chr19:41226805 Rr547579 1477 bp distal
Tm9sf3 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs237652777
MGI SNP Detail
Alliance Variant
Chr19:41226813 Rr547579 1485 bp distal
Tm9sf3 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A G
rs255388217
MGI SNP Detail
Alliance Variant
Chr19:41226863 Rr547579 1535 bp distal
Tm9sf3 Intron
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs586708901
MGI SNP Detail
Alliance Variant
Chr19:41226900 Rr547579 1572 bp distal
Tm9sf3 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs581601191
MGI SNP Detail
Alliance Variant
Chr19:41226915 Rr547579 1587 bp distal
Tm9sf3 Intron
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs226073505
MGI SNP Detail
Alliance Variant
Chr19:41226921 Rr547579 1593 bp distal
Tm9sf3 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs242264575
MGI SNP Detail
Alliance Variant
Chr19:41227007 Rr547579 1679 bp distal
Tm9sf3 Intron
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs36600693
MGI SNP Detail
Alliance Variant
Chr19:41227128 Rr547579 1800 bp distal
Tm9sf3 Coding-Synonymous
SNP A/G G G G G G G A G G G A G G A G
rs36344315
MGI SNP Detail
Alliance Variant
Chr19:41227308 Rr547579 1980 bp distal
Tm9sf3 Intron
SNP A/G A A A A A A G A A A A A A A A
rs254535104
MGI SNP Detail
Alliance Variant
Chr19:41227319 Rr547579 1991 bp distal
Tm9sf3 Intron
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs215896806
MGI SNP Detail
Alliance Variant
Chr19:41227321 Rr547579 1993 bp distal
Tm9sf3 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
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Showing SNP(s) 1 - 69 of 69

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
07/29/2025
MGI 6.24
The Jackson Laboratory

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