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Mouse SNP Summary
Symbol
Name
ID
Rr547650
regulatory region 547650
MGI:8009782

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs239379544
MGI SNP Detail
Alliance Variant
Chr19:41482636 Lcor Intron
Rr547650 1996 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255215445
MGI SNP Detail
Alliance Variant
Chr19:41482640 Lcor Intron
Rr547650 1992 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs31145578
MGI SNP Detail
Alliance Variant
Chr19:41482711 Lcor Intron
Rr547650 1921 bp proximal
SNP A/G A G G A G A
rs585178941
MGI SNP Detail
Alliance Variant
Chr19:41482733 Lcor Intron
Rr547650 1899 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259995352
MGI SNP Detail
Alliance Variant
Chr19:41482744 Lcor Intron
Rr547650 1888 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs579169325
MGI SNP Detail
Alliance Variant
Chr19:41482770 Lcor Intron
Rr547650 1862 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs580721956
MGI SNP Detail
Alliance Variant
Chr19:41482790 Lcor Intron
Rr547650 1842 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs222675054
MGI SNP Detail
Alliance Variant
Chr19:41482802 Lcor Intron
Rr547650 1830 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs247056556
MGI SNP Detail
Alliance Variant
Chr19:41482806 Lcor Intron
Rr547650 1826 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs30956005
MGI SNP Detail
Alliance Variant
Chr19:41482813 Lcor Intron
Rr547650 1819 bp proximal
SNP A/G G G G G A G A A G G G G A G G A G G
rs229549184
MGI SNP Detail
Alliance Variant
Chr19:41482822 Lcor Intron
Rr547650 1810 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs246957238
MGI SNP Detail
Alliance Variant
Chr19:41482961 Lcor Intron
Rr547650 1671 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260204060
MGI SNP Detail
Alliance Variant
Chr19:41483020 Lcor Intron
Rr547650 1612 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227162618
MGI SNP Detail
Alliance Variant
Chr19:41483076 Lcor Intron
Rr547650 1556 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs246355744
MGI SNP Detail
Alliance Variant
Chr19:41483144 Lcor Intron
Rr547650 1488 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30309379
MGI SNP Detail
Alliance Variant
Chr19:41483196 Lcor Intron
Rr547650 1436 bp proximal
SNP A/G A G A A A G A G A A A A A A G A A G A A
rs30914780
MGI SNP Detail
Alliance Variant
Chr19:41483309 Lcor Intron
Rr547650 1323 bp proximal
SNP A/G G A G G G A G G G G G G G A G G A G G
rs252149633
MGI SNP Detail
Alliance Variant
Chr19:41483317 Lcor Intron
Rr547650 1315 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs30608834
MGI SNP Detail
Alliance Variant
Chr19:41483375 Lcor Intron
Rr547650 1257 bp proximal
SNP G/T T G G G T G
rs241876767
MGI SNP Detail
Alliance Variant
Chr19:41483451 Lcor Intron
Rr547650 1181 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255136076
MGI SNP Detail
Alliance Variant
Chr19:41483515 Lcor Intron
Rr547650 1117 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs584473911
MGI SNP Detail
Alliance Variant
Chr19:41483536 Lcor Intron
Rr547650 1096 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs234732385
MGI SNP Detail
Alliance Variant
Chr19:41483552 Lcor Intron
Rr547650 1080 bp proximal
Tssr156431 within coordinates of
SNP G/T T T T T T T T T T T T T T G T
rs251228686
MGI SNP Detail
Alliance Variant
Chr19:41483622 Lcor Intron
Rr547650 1010 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs222169151
MGI SNP Detail
Alliance Variant
Chr19:41483718 Lcor Intron
Rr547650 914 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs244243138
MGI SNP Detail
Alliance Variant
Chr19:41483773 Lcor Intron
Rr547650 859 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs260997117
MGI SNP Detail
Alliance Variant
Chr19:41483821 Lcor Intron
Rr547650 811 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221826866
MGI SNP Detail
Alliance Variant
Chr19:41483864 Lcor Intron
Rr547650 768 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31180858
MGI SNP Detail
Alliance Variant
Chr19:41483869 Lcor Intron
Rr547650 763 bp proximal
SNP G/T G T G T G G G
rs260144919
MGI SNP Detail
Alliance Variant
Chr19:41483923 Lcor Intron
Rr547650 709 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs227110398
MGI SNP Detail
Alliance Variant
Chr19:41483964 Lcor Intron
Rr547649 within coordinates of
Rr547650 668 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240393591
MGI SNP Detail
Alliance Variant
Chr19:41484029 Lcor Intron
Rr547649 within coordinates of
Rr547650 603 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G A G G G G
rs37393883
MGI SNP Detail
Alliance Variant
Chr19:41484344 Lcor Intron
Rr547649 within coordinates of
Rr547650 288 bp proximal
SNP A/T A A A A A A T A A A A A A A A
rs230749047
MGI SNP Detail
Alliance Variant
Chr19:41484374 Lcor Intron
Rr547649 within coordinates of
Rr547650 258 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs46805348
MGI SNP Detail
Alliance Variant
Chr19:41484378 Lcor Intron
Rr547649 within coordinates of
Rr547650 254 bp proximal
SNP G G G G
rs212910248
MGI SNP Detail
Alliance Variant
Chr19:41484472 Lcor Intron
Rr547650 160 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs37163073
MGI SNP Detail
Alliance Variant
Chr19:41484493 Lcor Intron
Rr547650 139 bp proximal
SNP A/G A A A A A A G A A A A A A A A
rs248600845
MGI SNP Detail
Alliance Variant
Chr19:41484596 Lcor Intron
Rr547650 36 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs215047533
MGI SNP Detail
Alliance Variant
Chr19:41484657 Lcor Intron
Rr547650 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs234668390
MGI SNP Detail
Alliance Variant
Chr19:41484719 Lcor Intron
Rr547650 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251174571
MGI SNP Detail
Alliance Variant
Chr19:41484724 Lcor Intron
Rr547650 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs214744675
MGI SNP Detail
Alliance Variant
Chr19:41484727 Lcor Intron
Rr547650 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs36318995
MGI SNP Detail
Alliance Variant
Chr19:41484815 Lcor Intron
Rr547650 21 bp distal
SNP A/G G G G G G G A G G G G G G G G
rs255553846
MGI SNP Detail
Alliance Variant
Chr19:41484826 Lcor Intron
Rr547650 32 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs221237532
MGI SNP Detail
Alliance Variant
Chr19:41484855 Lcor Intron
Rr547650 61 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs240978416
MGI SNP Detail
Alliance Variant
Chr19:41484893 Lcor Intron
Rr547650 99 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs253373091
MGI SNP Detail
Alliance Variant
Chr19:41484935 Lcor Intron
Rr547650 141 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs578404438
MGI SNP Detail
Alliance Variant
Chr19:41485073 Lcor Intron
Rr547650 279 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs30318802
MGI SNP Detail
Alliance Variant
Chr19:41485076 Lcor Intron
Rr547650 282 bp distal
SNP C/T C T C T C C
rs36705197
MGI SNP Detail
Alliance Variant
Chr19:41485148 Lcor Intron
Rr547650 354 bp distal
SNP C/T T T T T T T T T T T C T T C T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs265158624
MGI SNP Detail
Alliance Variant
Chr19:41485188 Lcor Intron
Rr547650 394 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs231269775
MGI SNP Detail
Alliance Variant
Chr19:41485218 Lcor Intron
Rr547650 424 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs244548644
MGI SNP Detail
Alliance Variant
Chr19:41485224 Lcor Intron
Rr547650 430 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs261771552
MGI SNP Detail
Alliance Variant
Chr19:41485278 Lcor Intron
Rr547650 484 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs228385839
MGI SNP Detail
Alliance Variant
Chr19:41485408 Lcor Intron
Rr547650 614 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs248540388
MGI SNP Detail
Alliance Variant
Chr19:41485559 Lcor Intron
Rr547650 765 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs36538092
MGI SNP Detail
Alliance Variant
Chr19:41485565 Lcor Intron
Rr547650 771 bp distal
SNP C/T C C C C C C C C C C C C C T C
rs227956836
MGI SNP Detail
Alliance Variant
Chr19:41485653 Lcor Intron
Rr547650 859 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs250598086
MGI SNP Detail
Alliance Variant
Chr19:41485719 Lcor Intron
Rr547650 925 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215038417
MGI SNP Detail
Alliance Variant
Chr19:41485733 Lcor Intron
Rr547650 939 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs234644637
MGI SNP Detail
Alliance Variant
Chr19:41485823 Lcor Intron
Rr547650 1029 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254201806
MGI SNP Detail
Alliance Variant
Chr19:41485893 Lcor Intron
Rr547650 1099 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs212887284
MGI SNP Detail
Alliance Variant
Chr19:41485897 Lcor Intron
Rr547650 1103 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs234442878
MGI SNP Detail
Alliance Variant
Chr19:41485913 Lcor Intron
Rr547650 1119 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs253318319
MGI SNP Detail
Alliance Variant
Chr19:41486093 Lcor Intron
Rr547650 1299 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs220918806
MGI SNP Detail
Alliance Variant
Chr19:41486112 Lcor Intron
Rr547650 1318 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs30891038
MGI SNP Detail
Alliance Variant
Chr19:41486121 Lcor Intron
Rr547650 1327 bp distal
SNP C/T T T C T T T
rs257347532
MGI SNP Detail
Alliance Variant
Chr19:41486199 Lcor Intron
Rr547650 1405 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs223500052
MGI SNP Detail
Alliance Variant
Chr19:41486295 Lcor Intron
Rr547650 1501 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs241644400
MGI SNP Detail
Alliance Variant
Chr19:41486428 Lcor Intron
Rr547650 1634 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264963403
MGI SNP Detail
Alliance Variant
Chr19:41486484 Lcor Intron
Rr547650 1690 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs222310296
MGI SNP Detail
Alliance Variant
Chr19:41486556 Lcor Intron
Rr547650 1762 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs242466576
MGI SNP Detail
Alliance Variant
Chr19:41486594 Lcor Intron
Rr547650 1800 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs258847773
MGI SNP Detail
Alliance Variant
Chr19:41486777 Lcor Intron
Rr547650 1983 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
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Showing SNP(s) 1 - 74 of 74

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory

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