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Mouse SNP Summary
Symbol
Name
ID
Rr547979
regulatory region 547979
MGI:8010111

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Showing SNP(s) 1 - 65 of 65

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs252579022
MGI SNP Detail
Alliance Variant
Chr19:43218120 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 1907 bp proximal
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs222544705
MGI SNP Detail
Alliance Variant
Chr19:43218130 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 1897 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C
rs248562310
MGI SNP Detail
Alliance Variant
Chr19:43218159 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 1868 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs262986698
MGI SNP Detail
Alliance Variant
Chr19:43218198 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 1829 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T C T T T T C T T T T C T T T T T C T T T T T C T T T T
rs225119547
MGI SNP Detail
Alliance Variant
Chr19:43218220 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 1807 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G A G G G G A G G G G A G G G G G G A G G G G G G G G G G
rs246062794
MGI SNP Detail
Alliance Variant
Chr19:43218253 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 1774 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T A T T T T T T T T A T T T T T T T T T T T T T T T
rs585540858
MGI SNP Detail
Alliance Variant
Chr19:43218277 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 1750 bp proximal
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs578285141
MGI SNP Detail
Alliance Variant
Chr19:43218456 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 1571 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C
rs258368466
MGI SNP Detail
Alliance Variant
Chr19:43218523 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 1504 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs224575173
MGI SNP Detail
Alliance Variant
Chr19:43218538 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 1489 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C
rs238445523
MGI SNP Detail
Alliance Variant
Chr19:43218693 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 1334 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G G G G G G A G G G G A G G G G
rs260889317
MGI SNP Detail
Alliance Variant
Chr19:43218696 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 1331 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs235265218
MGI SNP Detail
Alliance Variant
Chr19:43218712 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 1315 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T C T T T T C T T T T
rs252526867
MGI SNP Detail
Alliance Variant
Chr19:43218869 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 1158 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs582291718
MGI SNP Detail
Alliance Variant
Chr19:43218975 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 1052 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A T A A A A A A T A A A A A A A A A A A A
rs216918064
MGI SNP Detail
Alliance Variant
Chr19:43218985 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 1042 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229526057
MGI SNP Detail
Alliance Variant
Chr19:43219009 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 1018 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs244274712
MGI SNP Detail
Alliance Variant
Chr19:43219040 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 987 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs211740879
MGI SNP Detail
Alliance Variant
Chr19:43219093 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 934 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T T A T T T T
rs230736850
MGI SNP Detail
Alliance Variant
Chr19:43219102 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 925 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs585405945
MGI SNP Detail
Alliance Variant
Chr19:43219106 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 921 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs580251642
MGI SNP Detail
Alliance Variant
Chr19:43219130 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 897 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs252603333
MGI SNP Detail
Alliance Variant
Chr19:43219190 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 837 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T C T T T T T T C T T T T T T C T T T T
rs217254061
MGI SNP Detail
Alliance Variant
Chr19:43219235 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 792 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T T T T T T
rs239844281
MGI SNP Detail
Alliance Variant
Chr19:43219317 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 710 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs259282164
MGI SNP Detail
Alliance Variant
Chr19:43219491 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 536 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs225425120
MGI SNP Detail
Alliance Variant
Chr19:43219502 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 525 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs30402538
MGI SNP Detail
Alliance Variant
Chr19:43219679 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 348 bp proximal
SNP C/T T C T T T C C C T T T T T T C T T T
rs252167912
MGI SNP Detail
Alliance Variant
Chr19:43219811 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 216 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs218215601
MGI SNP Detail
Alliance Variant
Chr19:43219833 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 194 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs30747944
MGI SNP Detail
Alliance Variant
Chr19:43220032 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 within coordinates of
SNP C/T T C T C
rs38117684
MGI SNP Detail
Alliance Variant
Chr19:43220034 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 within coordinates of
SNP A/C C C C A C A C
rs234192979
MGI SNP Detail
Alliance Variant
Chr19:43220482 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 186 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs6386239
MGI SNP Detail
Alliance Variant
Chr19:43220560 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 264 bp distal
SNP A/G G A
rs6386675
MGI SNP Detail
Alliance Variant
Chr19:43220601 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 305 bp distal
SNP A/G G G A G A G
rs229991248
MGI SNP Detail
Alliance Variant
Chr19:43220622 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 326 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs31144726
MGI SNP Detail
Alliance Variant
Chr19:43220679 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 383 bp distal
SNP C/G C G C C C
rs6387173
MGI SNP Detail
Alliance Variant
Chr19:43220709 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 413 bp distal
SNP A/T T A
rs31016289
MGI SNP Detail
Alliance Variant
Chr19:43220728 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 432 bp distal
SNP A/C C A C C C
rs246373312
MGI SNP Detail
Alliance Variant
Chr19:43220729 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 433 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs6387229
MGI SNP Detail
Alliance Variant
Chr19:43220741 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 445 bp distal
SNP C/T C T
rs6387251
MGI SNP Detail
Alliance Variant
Chr19:43220754 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 458 bp distal
SNP C/T T C
rs31142514
MGI SNP Detail
Alliance Variant
Chr19:43220976 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 680 bp distal
SNP A/G G A G G G
rs213605800
MGI SNP Detail
Alliance Variant
Chr19:43220977 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 681 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs31190802
MGI SNP Detail
Alliance Variant
Chr19:43221067 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 771 bp distal
SNP A/G A G A A A
rs30994768
MGI SNP Detail
Alliance Variant
Chr19:43221089 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 793 bp distal
SNP G/T G T G G G
rs218282918
MGI SNP Detail
Alliance Variant
Chr19:43221185 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 889 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs30348438
MGI SNP Detail
Alliance Variant
Chr19:43221197 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 901 bp distal
SNP G/T T G T T G T
rs254443137
MGI SNP Detail
Alliance Variant
Chr19:43221208 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 912 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs227633299
MGI SNP Detail
Alliance Variant
Chr19:43221227 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 931 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs48689548
MGI SNP Detail
Alliance Variant
Chr19:43221258 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 962 bp distal
SNP A/G A A A G A
rs265798229
MGI SNP Detail
Alliance Variant
Chr19:43221264 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 968 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs48831280
MGI SNP Detail
Alliance Variant
Chr19:43221389 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 1093 bp distal
SNP C/G G G G C G
rs238195949
MGI SNP Detail
Alliance Variant
Chr19:43221503 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 1207 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs37633034
MGI SNP Detail
Alliance Variant
Chr19:43221657 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 1361 bp distal
SNP A/G G G G G A
rs46171518
MGI SNP Detail
Alliance Variant
Chr19:43221725 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 1429 bp distal
SNP C/T C C C T C
rs246409236
MGI SNP Detail
Alliance Variant
Chr19:43221746 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 1450 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs47096945
MGI SNP Detail
Alliance Variant
Chr19:43221937 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 1641 bp distal
SNP A/T A T T T A
rs52444341
MGI SNP Detail
Alliance Variant
Chr19:43222031 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 1735 bp distal
SNP C/T T C C C C
rs52133453
MGI SNP Detail
Alliance Variant
Chr19:43222088 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 1792 bp distal
SNP A/G A G G G G G
rs52152283
MGI SNP Detail
Alliance Variant
Chr19:43222108 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 1812 bp distal
SNP A/C A C C C C
rs232658580
MGI SNP Detail
Alliance Variant
Chr19:43222143 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 1847 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs52415460
MGI SNP Detail
Alliance Variant
Chr19:43222200 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 1904 bp distal
SNP C/T T C C C C C
rs52160348
MGI SNP Detail
Alliance Variant
Chr19:43222225 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 1929 bp distal
SNP A/G A G G G G G
rs46168700
MGI SNP Detail
Alliance Variant
Chr19:43222275 Hpse2 Intron
Hpse2 Noncoding-Transcript-Variant
Rr547979 1979 bp distal
SNP C/T C T T T C T
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Showing SNP(s) 1 - 65 of 65

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last database update
07/22/2025
MGI 6.24
The Jackson Laboratory