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Mouse SNP Summary
Symbol
Name
ID 		Rr548038
regulatory region 548038
MGI:8010170

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs214631846
MGI SNP Detail		 Chr19:43598566 Gm20467 within coordinates of
Rr548036 within coordinates of
Rr548038 1993 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs234939598
MGI SNP Detail		 Chr19:43598648 Gm20467 within coordinates of
Rr548036 within coordinates of
Rr548038 1911 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs261730972
MGI SNP Detail		 Chr19:43598797 Cpgi10869 within coordinates of
Gm20467 within coordinates of
Rr548036 within coordinates of
Rr548038 1762 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs226189183
MGI SNP Detail		 Chr19:43598804 Cpgi10869 within coordinates of
Gm20467 within coordinates of
Rr548036 within coordinates of
Rr548038 1755 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs251927051
MGI SNP Detail		 Chr19:43598830 Cpgi10869 within coordinates of
Gm20467 within coordinates of
Rr548036 within coordinates of
Rr548038 1729 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251252812
MGI SNP Detail		 Chr19:43598984 Cpgi10869 within coordinates of
Gm20467 within coordinates of
Rr548036 within coordinates of
Rr548038 1575 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs580665942
MGI SNP Detail		 Chr19:43599104 Cpgi10869 within coordinates of
Gm20467 within coordinates of
Rr548037 within coordinates of
Rr548038 1455 bp proximal
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs221486265
MGI SNP Detail		 Chr19:43599178 Cpgi10869 within coordinates of
Gm20467 within coordinates of
Rr548037 within coordinates of
Rr548038 1381 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs237726421
MGI SNP Detail		 Chr19:43599208 Cpgi10869 within coordinates of
Gm20467 within coordinates of
Rr548037 within coordinates of
Rr548038 1351 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs257668855
MGI SNP Detail		 Chr19:43599250 Cpgi10869 within coordinates of
Gm20467 within coordinates of
Rr548037 within coordinates of
Rr548038 1309 bp proximal
 SNP C C C
rs228514465
MGI SNP Detail		 Chr19:43599268 Cpgi10869 within coordinates of
Gm20467 within coordinates of
Rr548037 within coordinates of
Rr548038 1291 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242019640
MGI SNP Detail		 Chr19:43599279 Cpgi10869 within coordinates of
Gm20467 within coordinates of
Rr548037 within coordinates of
Rr548038 1280 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G A G G G G G G A G G G G G G G A G G G G
rs265903573
MGI SNP Detail		 Chr19:43599290 Cpgi10869 within coordinates of
Gm20467 within coordinates of
Rr548037 within coordinates of
Rr548038 1269 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C A C C C C C C A C C C C C C C C C C C C
rs233802673
MGI SNP Detail		 Chr19:43599470 Gm20467 within coordinates of
Rr548037 within coordinates of
Rr548038 1089 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs257232665
MGI SNP Detail		 Chr19:43599501 Gm20467 within coordinates of
Rr548037 within coordinates of
Rr548038 1058 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs215586901
MGI SNP Detail		 Chr19:43599591 Gm20467 within coordinates of
Rr548038 968 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A T T T T T T A T T T T T T T A T T T T
rs225449471
MGI SNP Detail		 Chr19:43599621 Gm20467 within coordinates of
Rr548038 938 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs245472302
MGI SNP Detail		 Chr19:43599635 Gm20467 within coordinates of
Rr548038 924 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs211820170
MGI SNP Detail		 Chr19:43599677 Gm20467 within coordinates of
Rr548038 882 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs237041029
MGI SNP Detail		 Chr19:43599693 Gm20467 within coordinates of
Rr548038 866 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs256553853
MGI SNP Detail		 Chr19:43599718 Gm20467 within coordinates of
Rr548038 841 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs218457380
MGI SNP Detail		 Chr19:43599800 Gm20467 within coordinates of
Rr548038 759 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240654388
MGI SNP Detail		 Chr19:43599809 Gm20467 within coordinates of
Rr548038 750 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs251585139
MGI SNP Detail		 Chr19:43599960 Gm20467 within coordinates of
Rr548038 599 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221461919
MGI SNP Detail		 Chr19:43600010 Gm20467 within coordinates of
Rr548038 549 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs237639310
MGI SNP Detail		 Chr19:43600011 Gm20467 within coordinates of
Rr548038 548 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs250581194
MGI SNP Detail		 Chr19:43600044 Gm20467 within coordinates of
Rr548038 515 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs220635193
MGI SNP Detail		 Chr19:43600096 Gm20467 within coordinates of
Rr548038 463 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs245241982
MGI SNP Detail		 Chr19:43600120 Gm20467 within coordinates of
Rr548038 439 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs263935439
MGI SNP Detail		 Chr19:43600136 Gm20467 within coordinates of
Rr548038 423 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs227022890
MGI SNP Detail		 Chr19:43600138 Gm20467 within coordinates of
Rr548038 421 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs240469094
MGI SNP Detail		 Chr19:43600160 Gm20467 within coordinates of
Rr548038 399 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs259884000
MGI SNP Detail		 Chr19:43600161 Gm20467 within coordinates of
Rr548038 398 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225770647
MGI SNP Detail		 Chr19:43600187 Gm20467 within coordinates of
Rr548038 372 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs245435613
MGI SNP Detail		 Chr19:43600190 Gm20467 within coordinates of
Rr548038 369 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264514377
MGI SNP Detail		 Chr19:43600195 Gm20467 within coordinates of
Rr548038 364 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A T T T T T T A T T T T T T T A T T T T
rs228388526
MGI SNP Detail		 Chr19:43600208 Gm20467 within coordinates of
Rr548038 351 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs258959381
MGI SNP Detail		 Chr19:43600288 Gm20467 within coordinates of
Rr548038 271 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs218380126
MGI SNP Detail		 Chr19:43600346 Gm20467 within coordinates of
Rr548038 213 bp proximal
 SNP A/G A A A A A A A A A A G G A A A A A A A A G A A A A A G A A A A A A A A G G G G A A A A A A A A A A A A A A
rs225139723
MGI SNP Detail		 Chr19:43600423 Gm20467 within coordinates of
Rr548038 136 bp proximal
 SNP T T T
rs245549164
MGI SNP Detail		 Chr19:43600442 Gm20467 within coordinates of
Rr548038 117 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216254966
MGI SNP Detail		 Chr19:43600517 Cpgi10870 within coordinates of
Rr548038 42 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs231792861
MGI SNP Detail		 Chr19:43600537 Cpgi10870 within coordinates of
Rr548038 22 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs250543321
MGI SNP Detail		 Chr19:43600611 Cpgi10870 within coordinates of
Rr548038 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs220210170
MGI SNP Detail
Alliance Variant		 Chr19:43600799 Cpgi10870 within coordinates of
Nkx2-3 mRNA-UTR
Rr548038 25 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G G G C G G G G G G G C G G G G
rs31119355
MGI SNP Detail
Alliance Variant		 Chr19:43601065 Cpgi10870 within coordinates of
Nkx2-3 Coding-Synonymous
Rr548038 291 bp distal
 SNP A/G A G A G G G
rs263857344
MGI SNP Detail
Alliance Variant		 Chr19:43601341 Cpgi10870 within coordinates of
Nkx2-3 Intron
Rr548038 567 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226959791
MGI SNP Detail
Alliance Variant		 Chr19:43601393 Nkx2-3 Intron
Rr548038 619 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs240380671
MGI SNP Detail
Alliance Variant		 Chr19:43601401 Nkx2-3 Intron
Rr548038 627 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs259843652
MGI SNP Detail
Alliance Variant		 Chr19:43601428 Nkx2-3 Intron
Rr548038 654 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs219540088
MGI SNP Detail
Alliance Variant		 Chr19:43601672 Nkx2-3 Intron
Rr548038 898 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs239701005
MGI SNP Detail
Alliance Variant		 Chr19:43601694 Nkx2-3 Intron
Rr548038 920 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs261214775
MGI SNP Detail
Alliance Variant		 Chr19:43601696 Nkx2-3 Intron
Rr548038 922 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs217274480
MGI SNP Detail
Alliance Variant		 Chr19:43601738 Nkx2-3 Intron
Rr548038 964 bp distal
 SNP G G G
rs253690674
MGI SNP Detail
Alliance Variant		 Chr19:43601781 Nkx2-3 Intron
Rr548038 1007 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs583034545
MGI SNP Detail
Alliance Variant		 Chr19:43601821 Nkx2-3 Intron
Rr548038 1047 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs587058333
MGI SNP Detail
Alliance Variant		 Chr19:43601823 Nkx2-3 Intron
Rr548038 1049 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs266073334
MGI SNP Detail
Alliance Variant		 Chr19:43601859 Nkx2-3 Intron
Rr548038 1085 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs226655245
MGI SNP Detail
Alliance Variant		 Chr19:43602045 Nkx2-3 Intron
Rr548038 1271 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245514773
MGI SNP Detail
Alliance Variant		 Chr19:43602081 Nkx2-3 Intron
Rr548038 1307 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242081818
MGI SNP Detail
Alliance Variant		 Chr19:43602094 Nkx2-3 Intron
Rr548038 1320 bp distal
 SNP T T T
rs231710009
MGI SNP Detail
Alliance Variant		 Chr19:43602123 Nkx2-3 Intron
Rr548038 1349 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs256744985
MGI SNP Detail
Alliance Variant		 Chr19:43602124 Nkx2-3 Intron
Rr548038 1350 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212081214
MGI SNP Detail
Alliance Variant		 Chr19:43602144 Nkx2-3 Intron
Rr548038 1370 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs237331465
MGI SNP Detail
Alliance Variant		 Chr19:43602251 Nkx2-3 Intron
Rr548038 1477 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260353630
MGI SNP Detail
Alliance Variant		 Chr19:43602262 Nkx2-3 Intron
Rr548038 1488 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs227371840
MGI SNP Detail
Alliance Variant		 Chr19:43602342 Nkx2-3 Intron
Rr548038 1568 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs31177161
MGI SNP Detail
Alliance Variant		 Chr19:43602355 Nkx2-3 Intron
Rr548038 1581 bp distal
 SNP C/T T C C C C
rs253461740
MGI SNP Detail
Alliance Variant		 Chr19:43602380 Nkx2-3 Intron
Rr548038 1606 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs219457162
MGI SNP Detail
Alliance Variant		 Chr19:43602441 Cpgi10871 within coordinates of
Nkx2-3 Intron
Rr548038 1667 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs239658907
MGI SNP Detail
Alliance Variant		 Chr19:43602450 Cpgi10871 within coordinates of
Nkx2-3 Intron
Rr548038 1676 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260883778
MGI SNP Detail
Alliance Variant		 Chr19:43602565 Cpgi10871 within coordinates of
Nkx2-3 Intron
Rr548038 1791 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C G C C C C C C C C C C C C C G C C C C G C
rs581112558
MGI SNP Detail
Alliance Variant		 Chr19:43602597 Cpgi10871 within coordinates of
Nkx2-3 Intron
Rr548038 1823 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs221539566
MGI SNP Detail
Alliance Variant		 Chr19:43602605 Cpgi10871 within coordinates of
Nkx2-3 Intron
Rr548038 1831 bp distal
 SNP A/G A G G G G G G G G G G G G G G G G G G G G A G G G A A G G A A G A G A G A G A
rs249720970
MGI SNP Detail
Alliance Variant		 Chr19:43602606 Cpgi10871 within coordinates of
Nkx2-3 Intron
Rr548038 1832 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A T A A A T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs264283337
MGI SNP Detail
Alliance Variant		 Chr19:43602607 Cpgi10871 within coordinates of
Nkx2-3 Intron
Rr548038 1833 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T G
rs226620460
MGI SNP Detail
Alliance Variant		 Chr19:43602681 Cpgi10871 within coordinates of
Nkx2-3 Intron
Rr548038 1907 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
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Showing SNP(s) 1 - 77 of 77
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory