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Mouse SNP Summary
Symbol
Name
ID
Rr548598
regulatory region 548598
MGI:8010730

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs36271478
MGI SNP Detail
Alliance Variant
Chr19:45812812 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 1815 bp proximal
SNP A/G A G A G A A A G A A A A A A A A
rs222698117
MGI SNP Detail
Alliance Variant
Chr19:45812827 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 1800 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A
rs235881453
MGI SNP Detail
Alliance Variant
Chr19:45812875 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 1752 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs253357779
MGI SNP Detail
Alliance Variant
Chr19:45812893 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 1734 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs37717918
MGI SNP Detail
Alliance Variant
Chr19:45812961 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 1666 bp proximal
SNP A/G G A G A G G G A G G G G G G G G
rs242637621
MGI SNP Detail
Alliance Variant
Chr19:45812979 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 1648 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs260564795
MGI SNP Detail
Alliance Variant
Chr19:45813039 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 1588 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs221442380
MGI SNP Detail
Alliance Variant
Chr19:45813070 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 1557 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs243943266
MGI SNP Detail
Alliance Variant
Chr19:45813206 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 1421 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs262773088
MGI SNP Detail
Alliance Variant
Chr19:45813208 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 1419 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs230252749
MGI SNP Detail
Alliance Variant
Chr19:45813288 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 1339 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs253244889
MGI SNP Detail
Alliance Variant
Chr19:45813301 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 1326 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs257421793
MGI SNP Detail
Alliance Variant
Chr19:45813311 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 1316 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs229425027
MGI SNP Detail
Alliance Variant
Chr19:45813318 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 1309 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C T C C C C
rs37491508
MGI SNP Detail
Alliance Variant
Chr19:45813364 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 1263 bp proximal
SNP C/G C C C C C C G C C C C C C C
rs213139349
MGI SNP Detail
Alliance Variant
Chr19:45813384 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 1243 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G A G G G G G G A G G G G G G G G G G G G
rs234964893
MGI SNP Detail
Alliance Variant
Chr19:45813386 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 1241 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C G C C C C
rs256669513
MGI SNP Detail
Alliance Variant
Chr19:45813394 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 1233 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs36880306
MGI SNP Detail
Alliance Variant
Chr19:45813622 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 1005 bp proximal
SNP C/G G G G C G G C G G G G C G
rs582221553
MGI SNP Detail
Alliance Variant
Chr19:45813633 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 994 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs214261628
MGI SNP Detail
Alliance Variant
Chr19:45813646 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 981 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs3665022
MGI SNP Detail
Alliance Variant
Chr19:45813663 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 964 bp proximal
SNP C/G C G G G G C C
rs3665463
MGI SNP Detail
Alliance Variant
Chr19:45813702 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 925 bp proximal
SNP A/C C A A C C
rs220803173
MGI SNP Detail
Alliance Variant
Chr19:45813768 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 859 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A G A A A A A A G A A A A A A A G A A A A
rs236183473
MGI SNP Detail
Alliance Variant
Chr19:45813860 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 767 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs38503402
MGI SNP Detail
Alliance Variant
Chr19:45813898 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 729 bp proximal
SNP A/G G G G G G G G G G A G G A G
rs3666693
MGI SNP Detail
Alliance Variant
Chr19:45813928 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 699 bp proximal
SNP C/G C G C G C G C G C C C C C C C
rs241028588
MGI SNP Detail
Alliance Variant
Chr19:45813979 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 648 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs262413939
MGI SNP Detail
Alliance Variant
Chr19:45814039 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 588 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs222596279
MGI SNP Detail
Alliance Variant
Chr19:45814052 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 575 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C T C C C C C C T C C C C C C C C C C C C
rs240098082
MGI SNP Detail
Alliance Variant
Chr19:45814089 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 538 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs257356180
MGI SNP Detail
Alliance Variant
Chr19:45814124 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 503 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs229316892
MGI SNP Detail
Alliance Variant
Chr19:45814184 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 443 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs37509339
MGI SNP Detail
Alliance Variant
Chr19:45814203 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 424 bp proximal
SNP C/T T C C C T T C C C C C C C C
rs262036396
MGI SNP Detail
Alliance Variant
Chr19:45814252 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 375 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs37201463
MGI SNP Detail
Alliance Variant
Chr19:45814286 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 341 bp proximal
SNP A/G G G A G G G G G A A G A A G A A
rs37320057
MGI SNP Detail
Alliance Variant
Chr19:45814334 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 293 bp proximal
SNP A/G G G G G G G A G G G G G G G
rs36301822
MGI SNP Detail
Alliance Variant
Chr19:45814353 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 274 bp proximal
SNP A/C A C A C A A C C A A C A A C A A
rs37064495
MGI SNP Detail
Alliance Variant
Chr19:45814373 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 254 bp proximal
SNP A/G G G G G G G A G G G G G G G
rs246932366
MGI SNP Detail
Alliance Variant
Chr19:45814483 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 144 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs38448763
MGI SNP Detail
Alliance Variant
Chr19:45814545 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 82 bp proximal
SNP A/G G A G A G G G A G G G G G G G G
rs236076035
MGI SNP Detail
Alliance Variant
Chr19:45814601 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 26 bp proximal
SNP C/T C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs254103706
MGI SNP Detail
Alliance Variant
Chr19:45814604 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 23 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs212606145
MGI SNP Detail
Alliance Variant
Chr19:45814610 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 17 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs585017710
MGI SNP Detail
Alliance Variant
Chr19:45814625 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 2 bp proximal
SNP C/T T T T T C T T T T C T T T T T T T T T T T C T T T T T T C C C T T T C C C C C C T C T C C T T C T C T T T
rs37800253
MGI SNP Detail
Alliance Variant
Chr19:45814631 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 within coordinates of
SNP C/T C T C C C C C T C C
rs236066922
MGI SNP Detail
Alliance Variant
Chr19:45814637 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs257783681
MGI SNP Detail
Alliance Variant
Chr19:45814831 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs36952633
MGI SNP Detail
Alliance Variant
Chr19:45814840 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 within coordinates of
SNP C/T C C C C C C C C C C T C C T C
rs240031901
MGI SNP Detail
Alliance Variant
Chr19:45814917 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G A G G G G G G A G G G G G G G G G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs251214696
MGI SNP Detail
Alliance Variant
Chr19:45815005 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 34 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs222725360
MGI SNP Detail
Alliance Variant
Chr19:45815056 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 85 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A G A A A A A A G A A A A A A A G A A A A
rs240908873
MGI SNP Detail
Alliance Variant
Chr19:45815126 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 155 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G T G G G G G G T G G G G G G G T G G G G
rs579722663
MGI SNP Detail
Alliance Variant
Chr19:45815156 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 185 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T C T T T T T T C T T T T T T T T T T T T
rs240978486
MGI SNP Detail
Alliance Variant
Chr19:45815199 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 228 bp distal
SNP T T T
rs264905728
MGI SNP Detail
Alliance Variant
Chr19:45815203 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 232 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs227943435
MGI SNP Detail
Alliance Variant
Chr19:45815295 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 324 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A G A A A A A A G A A A A A A A G A A A A
rs247174771
MGI SNP Detail
Alliance Variant
Chr19:45815317 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 346 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T T T T T T T C T T T T T T C T T T T T T T C T T T T
rs36779098
MGI SNP Detail
Alliance Variant
Chr19:45815360 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 389 bp distal
SNP C/T T T T T T T T T T T C T T C T
rs37560321
MGI SNP Detail
Alliance Variant
Chr19:45815388 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 417 bp distal
SNP A/T A A A A A A A A A T A A T A
rs36833355
MGI SNP Detail
Alliance Variant
Chr19:45815462 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 491 bp distal
SNP A/C A A A A A A A A C A A C A
rs217787908
MGI SNP Detail
Alliance Variant
Chr19:45815472 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 501 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs228899236
MGI SNP Detail
Alliance Variant
Chr19:45815478 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 507 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T G T T T T T T T G T T T T
rs253674846
MGI SNP Detail
Alliance Variant
Chr19:45815494 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 523 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212974601
MGI SNP Detail
Alliance Variant
Chr19:45815562 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 591 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T C T T T T
rs234483404
MGI SNP Detail
Alliance Variant
Chr19:45815564 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 593 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C T C C C C
rs262372970
MGI SNP Detail
Alliance Variant
Chr19:45815582 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 611 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213576459
MGI SNP Detail
Alliance Variant
Chr19:45815655 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 684 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs36373966
MGI SNP Detail
Alliance Variant
Chr19:45815665 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 694 bp distal
SNP A/C A A A A A C A A A A A A A A
rs37488362
MGI SNP Detail
Alliance Variant
Chr19:45815684 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 713 bp distal
Rr548599 within coordinates of
SNP A/C C C C C C C C C C A C C C C
rs37860806
MGI SNP Detail
Alliance Variant
Chr19:45815706 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 735 bp distal
Rr548599 within coordinates of
SNP C/T C T T C C C
rs251163823
MGI SNP Detail
Alliance Variant
Chr19:45815920 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 949 bp distal
Rr548599 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs222712003
MGI SNP Detail
Alliance Variant
Chr19:45815980 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 1009 bp distal
Rr548599 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs6395882
MGI SNP Detail
Alliance Variant
Chr19:45816011 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 1040 bp distal
SNP A/G G A
rs256387060
MGI SNP Detail
Alliance Variant
Chr19:45816012 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 1041 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs220294666
MGI SNP Detail
Alliance Variant
Chr19:45816020 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 1049 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs6395898
MGI SNP Detail
Alliance Variant
Chr19:45816026 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 1055 bp distal
SNP C/T C T
rs265122485
MGI SNP Detail
Alliance Variant
Chr19:45816041 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 1070 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs222101906
MGI SNP Detail
Alliance Variant
Chr19:45816077 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 1106 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs240792212
MGI SNP Detail
Alliance Variant
Chr19:45816142 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 1171 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs261560135
MGI SNP Detail
Alliance Variant
Chr19:45816185 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 1214 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228889438
MGI SNP Detail
Alliance Variant
Chr19:45816210 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 1239 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258830264
MGI SNP Detail
Alliance Variant
Chr19:45816233 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 1262 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs261793530
MGI SNP Detail
Alliance Variant
Chr19:45816237 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 1266 bp distal
SNP C/T T T T C C C C C T C T T C C C C C C C C T T C C C T T C C T C T T C C C C C C C C C C C C T T C C C C C T
rs6397367
MGI SNP Detail
Alliance Variant
Chr19:45816267 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 1296 bp distal
SNP A/C A C
rs251249737
MGI SNP Detail
Alliance Variant
Chr19:45816358 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 1387 bp distal
SNP C/T C C C T T T T T C T C T T T T T T T T C C T T T C C T T C T C C T T T T T T T T T T T T C C T T T T T C
rs213455617
MGI SNP Detail
Alliance Variant
Chr19:45816379 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 1408 bp distal
Rr548600 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233457688
MGI SNP Detail
Alliance Variant
Chr19:45816478 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 1507 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245198313
MGI SNP Detail
Alliance Variant
Chr19:45816495 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 1524 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217288613
MGI SNP Detail
Alliance Variant
Chr19:45816673 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 1702 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs234320341
MGI SNP Detail
Alliance Variant
Chr19:45816739 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 1768 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs36883879
MGI SNP Detail
Alliance Variant
Chr19:45816749 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 1778 bp distal
SNP A/G A A A A A A A A A A G A A A A
rs261540580
MGI SNP Detail
Alliance Variant
Chr19:45816753 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 1782 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258259904
MGI SNP Detail
Alliance Variant
Chr19:45816774 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 1803 bp distal
SNP T T T
rs220477843
MGI SNP Detail
Alliance Variant
Chr19:45816851 Armh3 Intron
Armh3 Noncoding-Transcript-Variant
Rr548598 1880 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
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Showing SNP(s) 1 - 95 of 95

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory